Contig 002214:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015O24Sequence660002214 (4)ref|XP_009630311.1|3e-39PREDICTED: protein HGV2 [Nicotiana tomentosiformis]786005388 (4)ref|XP_010646387.1|2e-51PREDICTED: protein HGV2 isoform X1 [Vitis vinifera]
JMFF017A04Sequence551002214 (4)ref|XP_009630311.1|3e-39PREDICTED: protein HGV2 [Nicotiana tomentosiformis]754005388 (4)ref|XP_010646388.1|5e-41PREDICTED: protein HGV2 isoform X2 [Vitis vinifera]
JMSF003H18Sequence444002214 (4)ref|XP_009630311.1|6e-27PREDICTED: protein HGV2 [Nicotiana tomentosiformis]755005388 (4)ref|XP_010646387.1|3e-45PREDICTED: protein HGV2 isoform X1 [Vitis vinifera]
JMSF021L07Sequence636002214 (4)ref|XP_009630311.1|2e-29PREDICTED: protein HGV2 [Nicotiana tomentosiformis]782005388 (4)ref|XP_010646388.1|9e-55PREDICTED: protein HGV2 isoform X2 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF015O24+ CCA
                      ____________________________________________________________
consensus CCA
 
. : . : . : . : . : . :
JMFF015O24+ AGATCAGACTCGATCTTCTTTTGCATTATCATCATCTTCTTCTTCATCTTCATTTTCATC
JMSF021L07+ CATTATCATCATCTTCTTCTTCATCTTCATTTTCATC
                      ____________________________________________________________
consensus AGATCAGACTCGATCTTCTTTTGCATTATCATCATCTTCTTCTTCATCTTCATTTTCATC
 
. : . : . : . : . : . :
JMFF015O24+ ATCATCCTCTTCTTCTTTTCCATTTTGTATTGATGTTCCACCTTGTTCAGTGGGATTTGC
JMFF017A04+ TCAGTGGGATTTGC
JMSF021L07+ ATCATCCTCTTCTTCTTTTCCATTTTGTATTGATGTTCCACCTTGTTCAGTGGGATTTGC
                      ____________________________________________________________
consensus ATCATCCTCTTCTTCTTTTCCATTTTGTATTGATGTTCCACCTTGTTCAGTGGGATTTGC
 
. : . : . : . : . : . :
JMFF015O24+ AACAGAGGATTCAGCACTTATGCCACTCTTAGCAGGTTCATCTTTACAGGAATTTTGTTG
JMFF017A04+ AACAGAGGATTCAGCACTTATGCCACTCTTAGCAGGTTCATCTTTACAGGAATTTTGTTG
JMSF021L07+ AACAGAGGATTCAGCACTTATGCCACTCTTAGCAGGTTCATCTTTACAGGAATTTTGTTG
                      ____________________________________________________________
consensus AACAGAGGATTCAGCACTTATGCCACTCTTAGCAGGTTCATCTTTACAGGAATTTTGTTG
 
. : . : . : . : . : . :
JMFF015O24+ AGATTCCTCCTCCTTTCTAGGCACAGAACCCAATGGATCAGCTTCCTCTTGAGCTTTGTA
JMFF017A04+ AGATTCCTCCTCCTTTCTAGGCACAGAACCCAATGGATCAGCTTCCTCTTGAGCTTTGTA
JMSF003H18+ GGATCAGCTTCNTCTTGAGCTTTGTA
JMSF021L07+ AGATTCCTCCTCCTTTCTAGGCACAGAACCCAATGGATCAGCTTCCTCTTGAGCTTTGTA
                      ____________________________________________________________
consensus AGATTCCTCCTCCTTTCTAGGCACAGAACCCAATGGATCAGCTTCCTCTTGAGCTTTGTA
 
. : . : . : . : . : . :
JMFF015O24+ CAACAATGCACATCCAAATTTATAGTATGCTTGCACACATTCAGGAGAAAGCTCCCCGTG
JMFF017A04+ CAACAATGCACATCCAAATTTATAGTATGCTTGCACACATTCAGGAGAAAGCTCCCCGTG
JMSF003H18+ CAACAATGCACATCCAAATTTATAGTATGCTTGCACACATTCAGGAGAAAGCTCCCCGTG
JMSF021L07+ CAACAATGCACATCCAAATTTATAGTATGCTTGCACACATTCAGGAGAAAGCTCCCCGTG
                      ____________________________________________________________
consensus CAACAATGCACATCCAAATTTATAGTATGCTTGCACACATTCAGGAGAAAGCTCCCCGTG
 
. : . : . : . : . : . :
JMFF015O24+ ATTCATAGCCCTGATTTCCAGCGCACGGCTATAGCATTCAGTGGCTTCAGTATAATCTTT
JMFF017A04+ ATTCATAGCCCTGATTTCCAGCGCACGGCTATAGCATTCAGTGGCTTCAGTATAATCTTT
JMSF003H18+ ATTCATAGCCCTGATTTCCAGCGCACGGCTATAGCATTCAGTGGCTTCAGTATAATCTTT
JMSF021L07+ ATTCATAGCCCTGATTTCCAGCGCACGGCTATAGCATTCAGTGGCTTCAGTATAATC-TT
                      ____________________________________________________________
consensus ATTCATAGCCCTGATTTCCAGCGCACGGCTATAGCATTCAGTGGCTTCAGTATAATCTTT
 
. : . : . : . : . : . :
JMFF015O24+ GTCTTTAGAAGCCTTGTCCCCTTGTTTCGTCAGCAAATCCGCGTGCTCCAGAGATCCAAC
JMFF017A04+ GTCTTTAGAAGCCTTGTCCCCTTGTTTCGTCAGCAAATCCGCGTGCTCCAGAGATCCAAC
JMSF003H18+ GTCTTTAGAAGCCTTGTCCCCTTGTTTCGTCAGCAAATCCGCGTGCTCCAGAGATCCAAC
JMSF021L07+ GTCTTTAGAAGCCTTGTCCCCTTGTTTCGTCAGCAAATCCGCGTGCTCCAGAGATCCAAC
                      ____________________________________________________________
consensus GTCTTTAGAAGCCTTGTCCCCTTGTTTCGTCAGCAAATCCGCGTGCTCCAGAGATCCAAC
 
. : . : . : . : . : . :
JMFF015O24+ AGAGGGCTCCGACGAGTGCTCACCATTTCCGTTGTTCTCAGAGTCGGAGCGCCCGAGCGT
JMFF017A04+ AGAGGGCTCCGACGAGTGCTCACCATTTCCGTTGTTCTCAGAGTCGGAGCGCCCGAGCGT
JMSF003H18+ AGAGGGCTCCGACGAGTGCTCACCATTTCCGTTGTTCTCAGAGTCGGAGCGCCCGAGCGT
JMSF021L07+ AGAGGGCTCCGACGAGTGCTCACCATTTCCGTTGTTCTCAGAGTCGGAGCGCCCGAGCGT
                      ____________________________________________________________
consensus AGAGGGCTCCGACGAGTGCTCACCATTTCCGTTGTTCTCAGAGTCGGAGCGCCCGAGCGT
 
. : . : . : . : . : . :
JMFF015O24+ TATAACGCCCGCGTCCATGGAGTCCGGAATCCTTTCCGGCGAGGAGCCTTTGCCTTCTGA
JMFF017A04+ TATAACGCCCGCGTCCATGGAGTCCGGAATCCTTTCCGGCGAGGAGCCTTTGCCTTCTGA
JMSF003H18+ TATAACGCCCGCGTCCATGGAGTCCGGAATCCTTTCCGGCGAGGAGCCTTTGCCTTCTGA
JMSF021L07+ TATAACGCCCGCGTCCATGGAGTCCGGAATCCTTTCCGGCGAGGAGCCTTTGCCTTCTGA
                      ____________________________________________________________
consensus TATAACGCCCGCGTCCATGGAGTCCGGAATCCTTTCCGGCGAGGAGCCTTTGCCTTCTGA
 
. : . : . : . : . : . :
JMFF015O24+ ATTCACAACCTCGTCCGCCATTGACGAGAGACGACAGCGAAAACCTAGCAGACAGAAACC
JMFF017A04+ ATTCACAACCTCGTCCGCCATTGACGAGAGACGACAGCGAAAACCTAGCAGACAGAAACC
JMSF003H18+ ATTCACAACCTCGTCCGCCATTGACGAGAGACGACAGCGAAAACCTAGCAGACAGAAACC
JMSF021L07+ ATTCACAACCTCGTCCGCCATTGACGAGAGACGACAGCGAAAACCTAGCAGACAGAAACC
                      ____________________________________________________________
consensus ATTCACAACCTCGTCCGCCATTGACGAGAGACGACAGCGAAAACCTAGCAGACAGAAACC
 
. : . : . : . : . : . :
JMFF015O24+ CTACACTTCCCTCCCCTTTTTCAAAACGAAAACCCCTCAGGCGCAAAAAAATGAAG
JMFF017A04+ CTACACTTCCCTCCCCTTTTTCAAAACGAAAACCCCTCAGGCGCAAAAAAATGAAG
JMSF003H18+ CTACACTTCCCTCCCCTTTTTCAAAACGAAAACCCCTCAGGCGCAAAAAAATGAAG
JMSF021L07+ CTACACTTCCCTCCCCTTTTTCAAAACGAAAACCCCTCAGGCGCAAAAAAATGAAGGCCC
                      ____________________________________________________________
consensus CTACACTTCCCTCCCCTTTTTCAAAACGAAAACCCCTCAGGCGCAAAAAAATGAAGGCCC