Contig 002211:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A21Sequence601002211 (4)ref|XP_006339420.1|261PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]662005384 (4)ref|XP_009609631.1|109PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMFF016F07Sequence605002211 (4)ref|XP_009614536.1|359PREDICTED: uncharacterized protein LOC104107438 [Nicotiana tomentosiformis]653005384 (4)ref|XP_009609631.1|109PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMSF020M02Sequence669002211 (4)ref|XP_006339420.1|283PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]747005384 (4)ref|XP_009609631.1|132PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMSF021C20Sequence673002211 (4)ref|XP_006339420.1|283PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]806005384 (4)ref|XP_009609631.1|164PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF016F07+                                                 GTAAGTGTCAACAAGTTCCATC
                      ____________________________________________________________
consensus                                                   GTAAGTGTCAACAAGTTCCATC
 
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JMFF016F07+           ATCAAATCAACCAAATCAGAGAAAGGGCTGTCCAAAACCATTCCGGCAATAGAAGGATAC
                      ____________________________________________________________
consensus             ATCAAATCAACCAAATCAGAGAAAGGGCTGTCCAAAACCATTCCGGCAATAGAAGGATAC
 
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JMFF016F07+           TCAGCTCCATACATCAGACTTGTAACAGCACCCATTGATCTACCCCACAAGCCAATTAAA
JMSF020M02+                                                          CAAGCCAATTAAA
JMSF021C20+                                                          CAAGCCAATTAAA
                      ____________________________________________________________
consensus             TCAGCTCCATACATCAGACTTGTAACAGCACCCATTGATCTACCCCACAAGCCAATTAAA
 
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JMFF016F07+           GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
JMSF020M02+           GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
JMFF001A21+                                  ATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
JMSF021C20+           GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
                      ____________________________________________________________
consensus             GAAACATTTCCATCTTGCCGTAAATACTCAACAACAGCTTTAAGATCATCTTTTTCATTC
 
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JMFF016F07+           CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
JMSF020M02+           CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
JMFF001A21+           CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
JMSF021C20+           CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
                      ____________________________________________________________
consensus             CATCCCAAAGTAACATGCTCTCCCCCAGACAGTCCAGATCCAGAAAAGTCAAGGGTGAAT
 
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JMFF016F07+           ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
JMSF020M02+           ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
JMFF001A21+           ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
JMSF021C20+           ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
                      ____________________________________________________________
consensus             ACAGTAATATTTGATGGCAATAATATAATGGCAGCTTCGCTGGCATCTGCTCGACAGCCA
 
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JMFF016F07+           CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
JMSF020M02+           CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
JMFF001A21+           CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
JMSF021C20+           CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
                      ____________________________________________________________
consensus             CTGTTTCCATGACAGTAGATTACACAGGGCAGAGGCTTTCCTTCAGGACAAATGATAGGT
 
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JMFF016F07+           ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
JMSF020M02+           ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
JMFF001A21+           ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
JMSF021C20+           ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
                      ____________________________________________________________
consensus             ATGTAATGGCTACATTTAAGAGCATCACCCCGACTGTTTTTAACCTCCAAATCCTTCCGT
 
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JMFF016F07+           TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
JMSF020M02+           TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
JMFF001A21+           TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
JMSF021C20+           TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
                      ____________________________________________________________
consensus             TGGTACCACTTCCCTTTGAGCATGAATTCTTCATCTAGTAAATCATTCTTTGGGTCATAT
 
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JMFF016F07+           TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
JMSF020M02+           TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
JMFF001A21+           TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
JMSF021C20+           TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
                      ____________________________________________________________
consensus             TCAGCTCTGGGTGGTCTTATAATGAAGTTGACAAGCTGTTCCATACAGATTCAATGGCCA
 
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JMFF016F07+           ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACAC                 
JMSF020M02+           ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
JMFF001A21+           ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
JMSF021C20+           ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
                      ____________________________________________________________
consensus             ATCGATCTTCTCTCTCTAAATATAAATGTATAGAGAAATACACTGGTTACATGTATGTAT
 
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JMSF020M02+           TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
JMFF001A21+           TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
JMSF021C20+           TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
                      ____________________________________________________________
consensus             TTACATTATATATAAGATAGATAGATATATATATAATTTATATGCATGGGTTAAGGTGGG
 
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JMSF020M02+           TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
JMFF001A21+           TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
JMSF021C20+           TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
                      ____________________________________________________________
consensus             TAGAGAGAGAAAGAGGAATAAAAAGGGGAGGGAGCACTGTGGTAAGAGTTATGGGTTTGC
 
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JMSF020M02+           TTTCAGAGGAGAAGGTCAGAAGAGGAAGAAACGAAGCGCTTTTGTTTGGCTTCTC     
JMFF001A21+           TTTCAGAGGAGAAGGTCAGAAGAG                                    
JMSF021C20+           TTTCAGAGGAGAAGGTCAGAAGAGGAAGAAACGAAGCGCTTTTGTTTGGCTTCTCTTCCA
                      ____________________________________________________________
consensus             TTTCAGAGGAGAAGGTCAGAAGAGGAAGAAACGAAGCGCTTTTGTTTGGCTTCTCTTCCA