Contig 002208:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021A15Sequence683002208 (3)emb|CDP12182.1|3e-100unnamed protein product [Coffea canephora]788001819 (5)ref|XP_009590113.1|1e-103PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Nic
JMSF022A15Sequence641002208 (3)emb|CDP12182.1|3e-90unnamed protein product [Coffea canephora]384001819 (5)emb|CDP12182.1|3e-62unnamed protein product [Coffea canephora]
JMSF035O13Sequence631002208 (3)emb|CDP12182.1|7e-87unnamed protein product [Coffea canephora]752001819 (5)ref|XP_009590113.1|3e-93PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Nic

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021A15+ TTGGTAATCGCATAAGGAATGAA
                      ____________________________________________________________
consensus TTGGTAATCGCATAAGGAATGAA
 
. : . : . : . : . : . :
JMSF022A15+ TATCCTTTTTGAACTAGGGCCTCAACCGCATTGCTGATGGC
JMSF035O13+ GAACTAGGGCNTCAACCGCATTGCTGATGGC
JMSF021A15+ AAAAGGGCTTATTTTCTTGTATCCTTTTTGAACTAGGGCNTCAACCGCATTGCTGATGGC
                      ____________________________________________________________
consensus AAAAGGGCTTATTTTCTTGTATCCTTTTTGAACTAGGGCCTCAACCGCATTGCTGATGGC
 
. : . : . : . : . : . :
JMSF022A15+ TGTCATTCCTCCCAATCCTGATCCAATCAAAACGCCAATCTTGGATTTGTCCATAGTATC
JMSF035O13+ TGTCATTCCTCCCAATCCTGATCCAATCAAAACGCCAATCTTGGATTTGTCCATAGTATC
JMSF021A15+ TGTCATTCCTCCCAATCCTGATCCAATCAAAACGCCAATCTTGGATTTGTCCATAGTATC
                      ____________________________________________________________
consensus TGTCATTCCTCCCAATCCTGATCCAATCAAAACGCCAATCTTGGATTTGTCCATAGTATC
 
. : . : . : . : . : . :
JMSF022A15+ AAGAACTTGCTGGGTGAGATTTGCATCATTAAGGGCCCTCTTCCCAGCAACCAAAGAGTA
JMSF035O13+ AAGAACTTGCTGGGTGAGATTTGCATCATTAAGGGCCCTCTTCCCAGCAACCAAAGAGTA
JMSF021A15+ AAGAACTTGCTGGGTGAGATTTGCATCATTAAGGGCCCTCTTCCCAGCAACCAAAGAGTA
                      ____________________________________________________________
consensus AAGAACTTGCTGGGTGAGATTTGCATCATTAAGGGCCCTCTTCCCAGCAACCAAAGAGTA
 
. : . : . : . : . : . :
JMSF022A15+ TCTCCAGCAGTCATCCAGACGGCGATCATTCTTTCCATCTACGTAACCCTGAGTGGAGAA
JMSF035O13+ TCTCCAGCAGTCATCCAGACGGCGATCATTCTTTCCATCTACGTAACCCTGAGTGGAGAA
JMSF021A15+ TCTCCAGCAGTCATCCAGACGGCGATCATTCTTTCCATCTACGTAACCCTGAGTGGAGAA
                      ____________________________________________________________
consensus TCTCCAGCAGTCATCCAGACGGCGATCATTCTTTCCATCTACGTAACCCTGAGTGGAGAA
 
. : . : . : . : . : . :
JMSF022A15+ GTCTCGTATCTGTCCCCCGAACCGAACTGAGTAACTTGAAACATCAAATCTGTCTATTAA
JMSF035O13+ GTCTCGTATCTGTCCCCCGAACCGAACTGAGTAACTTGAAACATCAAATCTGTCTATTAA
JMSF021A15+ GTCTCGTATCTGTCCCCCGAACCGAACTGAGTAACTTGAAACATCAAATCTGTCTATTAA
                      ____________________________________________________________
consensus GTCTCGTATCTGTCCCCCGAACCGAACTGAGTAACTTGAAACATCAAATCTGTCTATTAA
 
. : . : . : . : . : . :
JMSF022A15+ ACTGATCCCACTCTGTCCCTCAAGAAGACAGTCATAGAATTTATGAATGTCACTGCCAAA
JMSF035O13+ ACTGATCCCACTCTGTCCCTCAAGAAGACAGTCATAGAATTTATGAATGTCACTGCCAAA
JMSF021A15+ ACTGATCCCACTCTGTCCCTCAAGAAGACAGTCATAGAATTTATGAATGTCACTGCCAAA
                      ____________________________________________________________
consensus ACTGATCCCACTCTGTCCCTCAAGAAGACAGTCATAGAATTTATGAATGTCACTGCCAAA
 
. : . : . : . : . : . :
JMSF022A15+ CACAGAAGCAAGGCCCATTCCAGTTATGACAATCCTTTTCTTGGGGTCTGTTTCTCGCTT
JMSF035O13+ CACAGAAGCAAGGCCCATTCCAGTTATGACAATCCTTTTCTTGGGGTCTGTTTCTCGCTT
JMSF021A15+ CACAGAAGCAAGGCCCATTCCAGTTATGACAATCCTTTTCTTGGGGTCTGTTTCTCGCTT
                      ____________________________________________________________
consensus CACAGAAGCAAGGCCCATTCCAGTTATGACAATCCTTTTCTTGGGGTCTGTTTCTCGCTT
 
. : . : . : . : . : . :
JMSF022A15+ GGGAGCCGAAACATTTGGAGATGCCATGGCCCTGATTCTCCTGCATCTTGGAGCTTTTGC
JMSF035O13+ GGGAGCCGAAACATTTGGAGATGCCATGGCCCTGATTCTCCTGCATCTTGGAGCTTTTGC
JMSF021A15+ GGGAGCCGAAACATTTGGAGATGCCATGGCCCTGATTCTCCTGCATCTTGGAGCTTTTGC
                      ____________________________________________________________
consensus GGGAGCCGAAACATTTGGAGATGCCATGGCCCTGATTCTCCTGCATCTTGGAGCTTTTGC
 
. : . : . : . : . : . :
JMSF022A15+ CTTAGAGGCTGCTGAACCCAATCTCAATTGGGTGGTTTGAAGCCCATTGTATTGGCAAAT
JMSF035O13+ CTTAGAGGCTGCTGAACCCAATCTCAATTGGGTGGTTTGAAGCCCATTGTATTGGCAAAT
JMSF021A15+ CTTAGAGGCTGCTGAACCCAATCTCAATTGGGTGGTTTGAAGCCCATTGTATTGGCAAAT
                      ____________________________________________________________
consensus CTTAGAGGCTGCTGAACCCAATCTCAATTGGGTGGTTTGAAGCCCATTGTATTGGCAAAT
 
. : . : . : . : . : . :
JMSF022A15+ AGAAACTCCATTTCTTGATGAATCTTTATTCTTGAAAGCCAAACCAGAAGAACATGTATT
JMSF035O13+ AGAAACTCCATTTCTTGATGAATCTTTATTCTTGAAAGCCAAACCAGAAGAACATGTATT
JMSF021A15+ AGAAACTCCATTTCTTGATGAATCTTTATTCTTGAAAGCCAAACCAGAAGAACATGTATT
                      ____________________________________________________________
consensus AGAAACTCCATTTCTTGATGAATCTTTATTCTTGAAAGCCAAACCAGAAGAACATGTATT
 
. : . : . : . : . : . :
JMSF022A15+ GCCAAGGCTAGCCATCTATCTCTCTTTACTGTTTGTGAAAATTTTGGGTAGACCACCCTC
JMSF035O13+ GCCAAGGCTAGCCATCTATCTCTCTTTACTGTTTGTGAAAATTTTGGGTAGACCACCCTC
JMSF021A15+ GCCAAGGCTAGCCATCTATCTCTCTTTACTGTTTGTGAAAATTTTGGGTAGACCACCCTC
                      ____________________________________________________________
consensus GCCAAGGCTAGCCATCTATCTCTCTTTACTGTTTGTGAAAATTTTGGGTAGACCACCCTC