Contig 002206:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020O24Sequence636002206 (2)emb|CDP10671.1|8e-09unnamed protein product [Coffea canephora]735010047 (3)ref|XP_009618655.1|9e-27PREDICTED: putative late blight resistance protein homolog R1B-16 [Nicotiana to
JMSF038N20Sequence637002206 (2)emb|CDP10671.1|8e-09unnamed protein product [Coffea canephora]854010047 (3)ref|XP_009618655.1|4e-32PREDICTED: putative late blight resistance protein homolog R1B-16 [Nicotiana to

Alignment

This contig is upended


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JMSF038N20+                                  GTCTTGAACTCCTCGTTGCATCCGACCATTCCACTGT
JMSF020O24+                                   TCTTGAACTCCTCGTTGCATCCGACCATTCCACTGT
                      ____________________________________________________________
consensus                                    GTCTTGAACTCCTCGTTGCATCCGACCATTCCACTGT
 
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JMSF038N20+           CAAACTTTATTGAAGCGTTTTTGGAAAATTTACTCACAGTAATGTTCTCTTGTTCTGGAT
JMSF020O24+           CAAACTTTATTGAAGCGTTTTTGGAAAATTTACTCACAGTAATGTTCTCTTGTTCTGGAT
                      ____________________________________________________________
consensus             CAAACTTTATTGAAGCGTTTTTGGAAAATTTACTCACAGTAATGTTCTCTTGTTCTGGAT
 
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JMSF038N20+           CAGGCTGTGATGATGTTGAACCAAGGAGTAATCCTCTTTGTCGCATCCTTTCATCATGTG
JMSF020O24+           CAGGCTGTGATGATGTTGAACCAAGGAGTAATCCTCTTTGTCGCATCCTTTCATCATGTG
                      ____________________________________________________________
consensus             CAGGCTGTGATGATGTTGAACCAAGGAGTAATCCTCTTTGTCGCATCCTTTCATCATGTG
 
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JMSF038N20+           ATGGACCCTTTGCGAGCTGCTTTTCAATTTTAATCTTTATCAACTTCTTCTTGAGGTAAT
JMSF020O24+           ATGGACCCTTTGCGAGCTGCTTTTCAATTTTAATCTTTATCAACTTCTTCTTGAGGTAAT
                      ____________________________________________________________
consensus             ATGGACCCTTTGCGAGCTGCTTTTCAATTTTAATCTTTATCAACTTCTTCTTGAGGTAAT
 
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JMSF038N20+           CAGTCTGTTTTACAGCTTCATTGAAGATTCCATGAAGCCTGAGTAGGCAAGCAAGATGCT
JMSF020O24+           CAGTCTGTTTTACAGCTTCATTGAAGATTCCATGAAGCCTGAGTAGGCAAGCAAGATGCT
                      ____________________________________________________________
consensus             CAGTCTGTTTTACAGCTTCATTGAAGATTCCATGAAGCCTGAGTAGGCAAGCAAGATGCT
 
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JMSF038N20+           TCATCCAACCCTTTGCCAGATAAATGGTAGTCAACTCCATCTCAATTCTTTCTTCAGCTT
JMSF020O24+           TCATCCAACCCTTTGCCAGATAAATGGTAGTCAACTCCATCTCAATTCTTTCTTCAGCTT
                      ____________________________________________________________
consensus             TCATCCAACCCTTTGCCAGATAAATGGTAGTCAACTCCATCTCAATTCTTTCTTCAGCTT
 
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JMSF038N20+           CGAACGCTACATCTCTTATCTCTTCCTCTAGATCTTTCATCGCCCCCGCATCATCATAGG
JMSF020O24+           CGAACGCTACATCTCTTATCTCTTCCTCTAGATCTTTCATCGCCCCCGCATCATCATAGG
                      ____________________________________________________________
consensus             CGAACGCTACATCTCTTATCTCTTCCTCTAGATCTTTCATCGCCCCCGCATCATCATAGG
 
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JMSF038N20+           CGATCTCAGATTCCTCAAGACTTTCTTGAAGGAAACCAAGATTTCTATGGAGAGAGACCA
JMSF020O24+           CGATCTCAGATTCCTCAAGACTTTCTTGAAGGAAACCAAGATTTCTATGGAGAGAGACCA
                      ____________________________________________________________
consensus             CGATCTCAGATTCCTCAAGACTTTCTTGAAGGAAACCAAGATTTCTATGGAGAGAGACCA
 
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JMSF038N20+           CCTTTCGTTTATATATAAGAGGCAGACGTGGTTCTGACTGCAAGAAATGTAGATATAGTG
JMSF020O24+           CCTTTCGTTTATATATAAGAGGCAGACGTGGTTCTGACTGCAAGAAATGTAGATATAGTG
                      ____________________________________________________________
consensus             CCTTTCGTTTATATATAAGAGGCAGACGTGGTTCTGACTGCAAGAAATGTAGATATAGTG
 
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JMSF038N20+           TTCCGTCAAGCGAAGTTACAGCAGCATAAGCCATTTTCAATTCGTCTCTCTATGTGGTAA
JMSF020O24+           TTCCGTCAAGCGAAGTTACAGCAGCATAAGCCATTTTCAATTCGTCTCTCTATGTGGTAA
                      ____________________________________________________________
consensus             TTCCGTCAAGCGAAGTTACAGCAGCATAAGCCATTTTCAATTCGTCTCTCTATGTGGTAA
 
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JMSF038N20+           GCTGATCTATGATCAGTCGATCAGAGCAGAACTACGTAAGAAGAAATGAAAGATGTGATC
JMSF020O24+           GCTGATCTATGATCAGTCGATCAGAGCAGAACTACGTAAGAAGAAATGAAAGATGTGATC
                      ____________________________________________________________
consensus             GCTGATCTATGATCAGTCGATCAGAGCAGAACTACGTAAGAAGAAATGAAAGATGTGATC