| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004A13 | Sequence | 210 | 002204 (8) | 670 | 001194 (9) | ref|XP_006362224.1| | 236 | PREDICTED: uncharacterized protein LOC102604479 [Solanum tuberosum] | |||
| JMFF015P22 | Sequence | 536 | 002204 (8) | ref|XP_004249173.1| | 183 | PREDICTED: uncharacterized protein LOC101253335 [Solanum lycopersicum] | 719 | 001194 (9) | ref|XP_009591149.1| | 1e-94 | PREDICTED: uncharacterized protein LOC104088185 isoform X3 [Nicotiana tomentosi |
| JMFF018D05 | Sequence | 535 | 002204 (8) | ref|XP_004249173.1| | 210 | PREDICTED: uncharacterized protein LOC101253335 [Solanum lycopersicum] | 731 | 001194 (9) | ref|XP_006362224.1| | 271 | PREDICTED: uncharacterized protein LOC102604479 [Solanum tuberosum] |
| JMFF043N10 | Sequence | 643 | 002204 (8) | ref|XP_004249173.1| | 245 | PREDICTED: uncharacterized protein LOC101253335 [Solanum lycopersicum] | 601 | 001194 (9) | ref|XP_006362224.1| | 219 | PREDICTED: uncharacterized protein LOC102604479 [Solanum tuberosum] |
| JMFS055H08 | Sequence | 615 | 002204 (8) | ref|XP_004249173.1| | 268 | PREDICTED: uncharacterized protein LOC101253335 [Solanum lycopersicum] | |||||
| JMSF012N11 | Sequence | 488 | 002204 (8) | ref|XP_004249173.1| | 150 | PREDICTED: uncharacterized protein LOC101253335 [Solanum lycopersicum] | 754 | 001194 (9) | ref|XP_009591149.1| | 4e-95 | PREDICTED: uncharacterized protein LOC104088185 isoform X3 [Nicotiana tomentosi |
| JMSF020K06 | Sequence | 633 | 002204 (8) | ref|XP_004249173.1| | 248 | PREDICTED: uncharacterized protein LOC101253335 [Solanum lycopersicum] | 799 | 001194 (9) | ref|XP_009591149.1| | 2e-98 | PREDICTED: uncharacterized protein LOC104088185 isoform X3 [Nicotiana tomentosi |
| JMSF033A09 | Sequence | 680 | 002204 (8) | ref|XP_004249173.1| | 276 | PREDICTED: uncharacterized protein LOC101253335 [Solanum lycopersicum] | 729 | 001194 (9) | ref|XP_009591149.1| | 1e-93 | PREDICTED: uncharacterized protein LOC104088185 isoform X3 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMFS055H08+ GCCATATAGAT
JMSF033A09+ ATATCCAAAGCCATATAGAT
____________________________________________________________
consensus ATATCCAAAGCCATATAGAT
. : . : . : . : . : . :
JMFF043N10+ TCACATCCACACCCCTACAAGCAGTTAC
JMFS055H08+ CTCAGCGTATTTCTTACCAAGCTTTTCAGGGGTCACATCCACACCCNTACAAGCAGTTAC
JMSF033A09+ CTCAGCGTATTTCTTACCAAGCTTTTCAGGGGTCACATCCACACCCCTACAAGCAGTTAC
JMSF020K06+ TCACATCCACACCCCTACAAGCAGTTAC
____________________________________________________________
consensus CTCAGCGTATTTCTTACCAAGCTTTTCAGGGGTCACATCCACACCCCTACAAGCAGTTAC
. : . : . : . : . : . :
JMFF018D05+ ACAATGCTAATACACTCAAACACATTATTCACAATTCG
JMFF043N10+ TACAACCGAAAACGCTTGATTCACAATGCTAATACACTCAAACACATTATTCACAATTCG
JMFS055H08+ TACAACCGAAACCGCTTGATTCACAATGCTAATACACTCAAACACATTATTCACAATTCG
JMSF033A09+ TACAACCGAAACCGCTTGATTCACAATGCTAATACACTCAAACACATTATTCACAATTCG
JMSF020K06+ TACAACCGAAACCGCTTGATTCACAATGCTAATACACTCAAACACATTATTCACAATCCG
____________________________________________________________
consensus TACAACCGAAACCGCTTGATTCACAATGCTAATACACTCAAACACATTATTCACAATTCG
. : . : . : . : . : . :
JMFF018D05+ ATCCTTATCATTCTCATCAGCAGTGGTAATAGCAAGCACATAAATGGAATTAACAAGTCG
JMFF043N10+ ATCCTTATCATTCTCATCAGCAGTGGTAATAGCAAGCACATAAATGGAATTAACAAGTCG
JMFS055H08+ ATCCTTATCATTCTCATCAGCAGTGGTAATAGCAAGCACATAAATGGAATTAACAAGTCG
JMSF033A09+ ATCCTTATCATTCTCATCAGCAGTGGTAATAGCAAGCACATAAATGGAATTAACAAGTCG
JMFF015P22+ CTTATCATTCTCATCAGCAGTGGTAATAGCAAGCACATAAATGGAATTAACAAGTCG
JMSF012N11+ CAAGTCG
JMSF020K06+ ATCCTTATCATTCTCATCAGCAGTGGTAATAGCAAGCACATAAATGGAATTAACAAGTCG
____________________________________________________________
consensus ATCCTTATCATTCTCATCAGCAGTGGTAATAGCAAGCACATAAATGGAATTAACAAGTCG
. : . : . : . : . : . :
JMFF018D05+ ATAAACAACACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
JMFF043N10+ ATAAACAACACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
JMFS055H08+ ATAAACAACACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
JMSF033A09+ ATAAACAACACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
JMFF015P22+ ATAAACAACACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
JMSF012N11+ ATAAACANCACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
JMSF020K06+ ATAAACAACACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
____________________________________________________________
consensus ATAAACAACACGATACCGGGATTCCACGCCAACAATTACCTGACCGGAAGATGCGGCGAG
. : . : . : . : . : . :
JMFF018D05+ AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
JMFF043N10+ AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
JMFS055H08+ AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
JMSF033A09+ AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
JMFF015P22+ AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
JMSF012N11+ AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
JMSF020K06+ AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
____________________________________________________________
consensus AGGATCGTCGCCGAGGGCATCGGAGTGCGTGGGGTCCGGTGAGGACATAGCGGAGGCCGG
. : . : . : . : . : . :
JMFF018D05+ TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
JMFF043N10+ TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
JMFS055H08+ TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
JMSF033A09+ TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
JMFF015P22+ TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
JMSF012N11+ TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
JMSF020K06+ TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
____________________________________________________________
consensus TTGAGCATGCTTGGAGAAGGCTAAACGGGTCTGGCGGAAGGCGGAGAGGGCCATTAGGGC
. : . : . : . : . : . :
JMFF018D05+ ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
JMFF043N10+ ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
JMFS055H08+ ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
JMSF033A09+ ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
JMFF015P22+ ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
JMSF012N11+ ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
JMSF020K06+ ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
____________________________________________________________
consensus ACGAGATGGAGGAAACCATTCTCGGGTTTGGAGGAGGATGTCGGGGCCGTTGGTGGGTTG
. : . : . : . : . : . :
JMFF018D05+ AAGGGAAAGTCCCAAACAAGACATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
JMFF043N10+ AAGGGAAAGTCCCAAACAAGACATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
JMFS055H08+ AAGGGAAAGTCCCAAACAAGACATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
JMSF033A09+ AAGGGAAAGTCCCAAACAAGACATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
JMFF004A13+ TAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
JMFF015P22+ AAGGGAAAGTCCCAAACAAGAAATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
JMSF012N11+ AAGGGAAAGTCCCAAACAAGACATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
JMSF020K06+ AAGGGAAAGTCCCAAACAAGACATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
____________________________________________________________
consensus AAGGGAAAGTCCCAAACAAGACATTATTAGGGTTTGTACTTCGAGTGATCTGGTTCAGAT
. : . : . : . : . : . :
JMFF018D05+ CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
JMFF043N10+ CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
JMFS055H08+ CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
JMSF033A09+ CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
JMFF004A13+ NTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
JMFF015P22+ CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
JMSF012N11+ CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
JMSF020K06+ CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
____________________________________________________________
consensus CTAGATTGAATTCAACACCCAAATTGAGATCGGATCAGAGATGCATATATTTGAGCTTAT
. : . : . : . : . : . :
JMFF018D05+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
JMFF043N10+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
JMFS055H08+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
JMSF033A09+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
JMFF004A13+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
JMFF015P22+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
JMSF012N11+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
JMSF020K06+ ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
____________________________________________________________
consensus ATTTGTGTATGATGCTGGGGAAGGGGGTAGGTTATTTACTCCATAGCCGGGGAGCTTTGA
. : . : . : . : . : . :
JMFF018D05+ CTGCTTTGTGAAGCCTT
JMFF043N10+ CTGCTTTGTGAAGCCTTGAAAAGATGACTCGTTGCAGAGATCAGGTGCGAGGTAACT
JMFS055H08+ CTGC
JMSF033A09+ CTGCTTTGTGAAGCCTTGAAAAGATGACTCGTTGCAGAGATCAGGTGCGAGGTAACT
JMFF004A13+ CTGCTTTGTGAAGCCTTGAAAAGATGACTCGTTGCAGAGATCAGGTGCGAGGTAACT
JMFF015P22+ CTGCTTTGTGAAGCCTTGAAAAGATGACTCGTTGCAGAGATCAGGTGCGAGGTAACT
JMSF012N11+ CTGCTTTGTGAAGCCTTGAAAAGATGACTCGTTGCAGAGATCAGGTGCGAGGTAACT
JMSF020K06+ CTGCTTTGTGAAGCCTTGAAAAGATGACTCGTTGCAGAGATCAGGTGCGAGGTAACTAGC
____________________________________________________________
consensus CTGCTTTGTGAAGCCTTGAAAAGATGACTCGTTGCAGAGATCAGGTGCGAGGTAACTAGC