Contig 002202:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS165G04Sequence440002202 (2)
JMSF020H04Sequence538002202 (2)803021446ref|XP_010645085.1|2e-88PREDICTED: general transcription factor 3C polypeptide 3 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS165G04+ CACTTTCACCACTATACCCATCATCACACTCATCATCTGACCCGGTTGCTCCT
JMSF020H04+ CTTCTTCACTTTCACCACTATACCCATCATCACACTCATCATCTGACCCGGTTGCTCCT
                      ____________________________________________________________
consensus CTTCTTCACTTTCACCACTATACCCATCATCACACTCATCATCTGACCCGGTTGCTCCT
 
. : . : . : . : . : . :
JMFS165G04+ TCACTGCCATCTAACTCCACATCTTTTTCAGAACCTGCATTTGACACAAACTTTCCACCG
JMSF020H04+ TCACTGCCATCTAACTCCACATCTTTTTCAGAACNTGCATTTGACACAAACTTTCCACCG
                      ____________________________________________________________
consensus TCACTGCCATCTAACTCCACATCTTTTTCAGAACCTGCATTTGACACAAACTTTCCACCG
 
. : . : . : . : . : . :
JMFS165G04+ TCTTCAGAAGAACCAACTTTGTTTGTTTCTTCACCCATTGCCTTTAATCCACAAGGTACA
JMSF020H04+ TCTTCAGAAGAACCAACTTTGTTTGTTTCTTCACCCATTGCCTTTAATCCACAAGGTACA
                      ____________________________________________________________
consensus TCTTCAGAAGAACCAACTTTGTTTGTTTCTTCACCCATTGCCTTTAATCCACAAGGTACA
 
. : . : . : . : . : . :
JMFS165G04+ TATATGCACTTGACTCAAAAATATGTATACAAATCCACAGAATTGCTTCCACCTGCAAAT
JMSF020H04+ TATATGCACTTGACTCAAAAATATGTATACAAATCCACAGAATTGCTTCCACCTGCAAAT
                      ____________________________________________________________
consensus TATATGCACTTGACTCAAAAATATGTATACAAATCCACAGAATTGCTTCCACCTGCAAAT
 
. : . : . : . : . : . :
JMFS165G04+ CGCGGACGGACGAAGAACTGAAGAAGACTACCCCCCTGCTGCCTGCTATGTTGTTCTTCT
JMSF020H04+ CGCGGACGGACGAAGAACTGAAGAAGACTACCGAGCTGCTGCCTGCTATGTTGTTCTTCT
                      ____________________________________________________________
consensus CGCGGACGGACGAAGAACTGAAGAAGACTACCGCGCTGCTGCCTGCTATGTTGTTCTTCT
 
. : . : . : . : . : . :
JMFS165G04+ TCCCAGGGAAGGACGGAGCTGACGGAGCTGACGGAGGCTGACGGAGCTGACGGAGATGCC
JMSF020H04+ TCCCAGGGAAGGACGGAGCTGACGGAGCTGACGGA-GCTGACGGAGCTGACGGAGATGCC
                      ____________________________________________________________
consensus TCCCAGGGAAGGACGGAGCTGACGGAGCTGACGGAGGCTGACGGAGCTGACGGAGATGCC
 
. : . : . : . : . : . :
JMFS165G04+ GACTGCTGTCCACCCAGAACGGCCAGAGGTCGGCGGTGGCGACTTGCGACTTGCGACTTG
JMSF020H04+ GACTGCTGTCCACCCAGAACGGCCAGAGGTCGGCGGTGGCGACTTGCGACTTGCGACTTG
                      ____________________________________________________________
consensus GACTGCTGTCCACCCAGAACGGCCAGAGGTCGGCGGTGGCGACTTGCGACTTGCGACTTG
 
. : . : . : . : . : . :
JMFS165G04+ CGACTTGCGACTTGCGACTTGCGATTT
JMSF020H04+ CGACTTGCGACTTGCGACTTGCGATTTGCGAAGCAGAGCCGCAGAGGAGAGACCGAGAAG
                      ____________________________________________________________
consensus CGACTTGCGACTTGCGACTTGCGATTTGCGAAGCAGAGCCGCAGAGGAGAGACCGAGAAG
 
. : . : . : . : . : . :
JMSF020H04+ CAGAGCCGNTAAGTTGGGGCGTGGTCTACTGGTTTAGGAACAAATGAATTAAAAAAGGCC
                      ____________________________________________________________
consensus CAGAGCCGNTAAGTTGGGGCGTGGTCTACTGGTTTAGGAACAAATGAATTAAAAAAGGCC