Contig 002192:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051J16Sequence430002192 (2)ref|XP_009762541.1|62.8PREDICTED: uncharacterized protein LOC104214549 [Nicotiana sylvestris]405009868 (2)gb|KDP41032.1|7e-22hypothetical protein JCGZ_03564 [Jatropha curcas]
JMSF018I13Sequence602002192 (2)ref|XP_008226335.1|70.9PREDICTED: uncharacterized protein LOC103325927 [Prunus mume]731009868 (2)ref|XP_006442355.1|5e-88hypothetical protein CICLE_v10021126mg [Citrus clementina] gb|ESR55595.1| hypoth

Alignment

This contig is upended


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JMSF018I13+                                                                     CN
                      ____________________________________________________________
consensus                                                                       CN
 
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JMFF051J16+                              GTATGAAGTACATTGCCGCAAGGAGAAACCCAGGGATCCAA
JMSF018I13+           TTAGTTACAGCTGTCCCAAGTATGAAGTACATTGCCGCAAGGAGAAACCCAGGGATCCAA
                      ____________________________________________________________
consensus             TTAGTTACAGCTGTCCCAAGTATGAAGTACATTGCCGCAAGGAGAAACCCAGGGATCCAA
 
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JMFF051J16+           AAGGCGCGCCAAGTGAGAGTGGCGAGCAAGAAAGCCGACGCCGCACCGGAGAGCGACAGG
JMSF018I13+           AAGGCGCGCCAAGTGAGAGTGGCGAGCAAGAAAGCCGACGCCGCACCGGAGAGCGACAGG
                      ____________________________________________________________
consensus             AAGGCGCGCCAAGTGAGAGTGGCGAGCAAGAAAGCCGACGCCGCACCGGAGAGCGACAGG
 
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JMFF051J16+           CCAGAGACCAAAAGCGGAGAACCGAGGACGAAGATGATGAGGTTGCTAGCAACGGCGGAC
JMSF018I13+           CCAGAGACCAAAAGCGGAGAACCGAGGACGAAGATGATGAGGTTGCTAGCAACGGCGGAC
                      ____________________________________________________________
consensus             CCAGAGACCAAAAGCGGAGAACCGAGGACGAAGATGATGAGGTTGCTAGCAACGGCGGAC
 
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JMFF051J16+           TGCCACGTCGGCGGAGAGGTCAGGACCAATTGGACTACTCTCTGTACTACCCCGAGATCG
JMSF018I13+           TGCCACGTCGGCGGCGAGGTCAGGACCAATTGGACTACTCTCTGTACTACCCCGAGATCG
                      ____________________________________________________________
consensus             TGCCACGTCGGCGGCGAGGTCAGGACCAATTGGACTACTCTCTGTACTACCCCGAGATCG
 
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JMFF051J16+           GTGGGAGCTGCTTGGGCTCTGACAGAAGGCTGGATGTGCAGTCTCTTGAGCGGGCTAGGG
JMSF018I13+           GTGGGAGCTGCTTGGGCTCTGACAGAAGGCTGGATGTGCAGTCTCTTGAGCGGGCTAGGG
                      ____________________________________________________________
consensus             GTGGGAGCTGCTTGGGCTCTGACAGAAGGCTGGATGTGCAGTCTCTTGAGCGGGCTAGGG
 
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JMFF051J16+           TTTTGGATTGGGAAATTGGAAGGAGCAGAAGAGAGATTTGAGCGGCGAGAAGCGAGGAAT
JMSF018I13+           TTTTGGATTGGGAAATTGGAAGGAGCAGAAGAGAGATTTGAGCGGCGAGAAGCGAGGAAT
                      ____________________________________________________________
consensus             TTTTGGATTGGGAAATTGGAAGGAGCAGAAGAGAGATTTGAGCGGCGAGAAGCGAGGAAT
 
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JMFF051J16+           AATGAAGGGTGATGCGGGAATGTGAATATTGGAGCTAAAGTCGCCATTTTTGAGTGGTTG
JMSF018I13+           AATGAAGGGTGATGCGGGAATGTGAATATTGGAGCTAAAGTCGCCATTTTTGAGTGGTTG
                      ____________________________________________________________
consensus             AATGAAGGGTGATGCGGGAATGTGAATATTGGAGCTAAAGTCGCCATTTTTGAGTGGTTG
 
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JMFF051J16+           AAGAAAGTGTAAGCAGCCTTGTCTGAGCT                               
JMSF018I13+           AAGAAAGTGTAAGCAGCCTTGTCTGAGCTGAAGCTGGAGAAGAAAGAGAGGTGTAATCAA
                      ____________________________________________________________
consensus             AAGAAAGTGTAAGCAGCCTTGTCTGAGCTGAAGCTGGAGAAGAAAGAGAGGTGTAATCAA
 
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JMSF018I13+           ACCGGCTGGTAACCAGCAAAGATGAAGAAATTCATCTATGGCGGGTCCACAATTCGAAGC
                      ____________________________________________________________
consensus             ACCGGCTGGTAACCAGCAAAGATGAAGAAATTCATCTATGGCGGGTCCACAATTCGAAGC
 
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JMSF018I13+           TGGATTGGAGACAAGTGAGGAAGAGGCAGCTGTTCACTGCCAAACAGGAATAAATTTCTC
                      ____________________________________________________________
consensus             TGGATTGGAGACAAGTGAGGAAGAGGCAGCTGTTCACTGCCAAACAGGAATAAATTTCTC