Contig 002191:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018C04Sequence559002191 (3)ref|XP_008346009.1|3e-36PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-li766008500 (3)gb|ACF17670.1|7e-111putative pyruvate dehydrogenase E1 beta subunit [Capsicum annuum]
JMSF018H23Sequence247002191 (3)662008500 (3)ref|XP_006346842.1|2e-131PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-li
JMSF027L22Sequence651002191 (3)ref|XP_008346009.1|5e-58PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-li691008500 (3)gb|ACF17670.1|7e-143putative pyruvate dehydrogenase E1 beta subunit [Capsicum annuum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF027L22+ GGAGTGTCGAGGACCCTTAAATCACCGTACTTTTCTGCCAGTCCTTTAGTG
                      ____________________________________________________________
consensus GGAGTGTCGAGGACCCTTAAATCACCGTACTTTTCTGCCAGTCCTTTAGTG
 
. : . : . : . : . : . :
JMFF018C04+ TCACACACACACTCGGATCT
JMSF027L22+ ACCTTGTATGAACCTCCATAATGACCGACATCTTCACCCATCACACACACACTCGGATCT
                      ____________________________________________________________
consensus ACCTTGTATGAACCTCCATAATGACCGACATCTTCACCCATCACACACACACTCGGATCT
 
. : . : . : . : . : . :
JMFF018C04+ CTTTCCATCTCCTCATCAAGCCCTTCCCGAAGGGCTTCAAAAAGCAAAAGTTCATGCCCC
JMSF027L22+ CTTTCCATCTCCCCATCAAGCCCTTCCCGAAGGGCTTCAAAAAGCAAAAGTTCATGCCCC
                      ____________________________________________________________
consensus CTTTCCATCTCCTCATCAAGCCCTTCCCGAAGGGCTTCAAAAAGCAAAAGTTCATGCCCC
 
. : . : . : . : . : . :
JMFF018C04+ GGTTTGGACGATGTAGAAGCAGCTGCACCATCAGCCTTCGTCGCAACAGCACTAGTAACC
JMSF027L22+ GGTTTGGACGATGTAGAAGCAGCTGCACCATCAGCCTTCGTCGCAACAGCACTAGTAACC
                      ____________________________________________________________
consensus GGTTTGGACGATGTAGAAGCAGCTGCACCATCAGCCTTCGTCGCAACAGCACTAGTAACC
 
. : . : . : . : . : . :
JMFF018C04+ AATTGCTCAGCTCTCTTTCCATTCCAGCTCAAACCAGAGCTTAATCTCCCATCAGATCTA
JMSF027L22+ AATTGCTCAGCTCTCTTTCCATTCCAGCTCAAACCAGAGCTTAATCTCCCATCAGATCTA
                      ____________________________________________________________
consensus AATTGCTCAGCTCTCTTTCCATTCCAGCTCAAACCAGAGCTTAATCTCCCATCAGATCTA
 
. : . : . : . : . : . :
JMFF018C04+ ATCACAAAAAAGGTTCCTTTCCTCCCTGGGAAAGATCTGCGAGAAGAGATGTGAAACTTC
JMSF027L22+ ATCACAAAAAAGGTTCCTTTCCTCCCTGGGAAAGATCTGCGAGAAGAGATGTGAAACTTC
                      ____________________________________________________________
consensus ATCACAAAAAAGGTTCCTTTCCTCCCTGGGAAAGATCTGCGAGAAGAGATGTGAAACTTC
 
. : . : . : . : . : . :
JMFF018C04+ TTGGAATCTAAGGAATTGGGCGAGGAGAGAGTAGTAGCGGCCCCAATTGCTTGAATAATA
JMSF027L22+ TTGGAATCTAAGGAATTGGGCGAGGAGAGAGTAGTAGCGGCCCCAATTGCTTGAATAATA
JMSF018H23+ AATAATA
                      ____________________________________________________________
consensus TTGGAATCTAAGGAATTGGGCGAGGAGAGAGTAGTAGCGGCCCCAATTGCTTGAATAATA
 
. : . : . : . : . : . :
JMFF018C04+ GCAGCCATTTCTTCTTCTTCTTCTTCTTATGCTTCCTGAATTGGTGATGAAGAATTCCAA
JMSF027L22+ GCAGCCATTTCTTCTTCTTCTTCTTCTTATGCTTCCTGAATTGGTGATGAAGAATTCCAA
JMSF018H23+ GCAGCCATTTCTTCTTCTTCTTCTTCTTATGCTTCCTGAATTGGTGATGAAGAATTCCAA
                      ____________________________________________________________
consensus GCAGCCATTTCTTCTTCTTCTTCTTCTTATGCTTCCTGAATTGGTGATGAAGAATTCCAA
 
. : . : . : . : . : . :
JMFF018C04+ GTACAGCAATACTACCTACATTCAAGAAATAGCGCAGACTTTGTGTGGGGAAGAAAGTAT
JMSF027L22+ GTACAGCAATACTACCTACATTCAAGAAATAGCGCAGACTTTGTGTGGGGAAGAAAGTAT
JMSF018H23+ GTACAGCAATACTACCTACATTCAAGAAATAGCGCAGACTTTGTGTGGGGAAGAAAGTAT
                      ____________________________________________________________
consensus GTACAGCAATACTACCTACATTCAAGAAATAGCGCAGACTTTGTGTGGGGAAGAAAGTAT
 
. : . : . : . : . : . :
JMFF018C04+ ATAGAGATTGATAGAAAGTGGCGTGGTTTCATAGATAGAAAGAGTGGGAAGGGCGGCGGA
JMSF027L22+ ATAGAGATTGATAGAAAGTGGCGTGGTTTCATAGATAGAAAGAGTGGGAAGGGCGGCGGA
JMSF018H23+ ATAGAGATTGATAGAAAGTGGCGTGGTTTCATAGATAGAAAGAGTGGGAAGGGCGGCGGA
                      ____________________________________________________________
consensus ATAGAGATTGATAGAAAGTGGCGTGGTTTCATAGATAGAAAGAGTGGGAAGGGCGGCGGA
 
. : . : . : . : . : . :
JMFF018C04+ CAAAGCGAGGTGTAGGAGAGGTCGGGGCAGAAACTTTCATTTTTGTTCTGAGTTTCGG
JMSF027L22+ CAAAGCGAGGTGTAGGAGAGGTCGGGGCAGAAACTTTCATTTTTGTTCTGAGTTTCGG
JMSF018H23+ CAAAGCGAGGTGTAGGAGAGGTCGGGGCAGAAACTTTCATTTTTGTTNTGAGTTTCGGCC
                      ____________________________________________________________
consensus CAAAGCGAGGTGTAGGAGAGGTCGGGGCAGAAACTTTCATTTTTGTTCTGAGTTTCGGCC