| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS005A03 | Sequence | 499 | 002190 (5) | gb|AAO13696.1| | 9e-58 | sucrose transporter [Solanum lycopersicum] | |||||
| JMFS162D07 | Sequence | 554 | 002190 (5) | gb|ADL63115.1| | 4e-75 | sucrose transporter 3 [Ipomoea batatas] | |||||
| JMSF008B03 | Sequence | 344 | 002190 (5) | gb|ABF06450.1| | 6e-24 | putative sucrose transport protein SUT1 [Nicotiana langsdorffii x Nicotiana san | 736 | 001381 (5) | gb|ADL63120.1| | 4e-84 | sucrose transporter 2x [Ipomoea batatas] |
| JMSF018F15 | Sequence | 541 | 002190 (5) | gb|AAO13696.1| | 8e-65 | sucrose transporter [Solanum lycopersicum] | 681 | 001381 (5) | emb|CAQ58421.1| | 2e-50 | sucrose transporter [Nicotiana tabacum] |
| JMSF026M02 | Sequence | 534 | 002190 (5) | gb|AAO13696.1| | 5e-60 | sucrose transporter [Solanum lycopersicum] | 713 | 001381 (5) | gb|ADL63117.1| | 4e-79 | sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [ |
This contig is upended
. : . : . : . : . : . :
JMFS162D07+ TAATAATATTATAATACCTGTAACATGTTATTAGCGACGTCGAGGATCCAAAAAC
____________________________________________________________
consensus TAATAATATTATAATACCTGTAACATGTTATTAGCGACGTCGAGGATCCAAAAAC
. : . : . : . : . : . :
JMFS162D07+ CGACGACAAAAACAGTGATGGCACGGGGCTTGGAGGTTTTGCCGAGGCGGTCGCCGGCGG
JMSF026M02+ CAAAAACAGTGATGGCACGGGGCTTGGAGGTTTTGCCGAGGCGGTNGCNGGCGG
JMFS005A03+ TGCCGAGGCGGTCGCCGNCGG
JMSF018F15+ CAAAAACAGTGATGGCACGGGGCTTGGAGGTTTTGCCGAGGCGGTCGCCGGCGG
____________________________________________________________
consensus CGACGACAAAAACAGTGATGGCACGGGGCTTGGAGGTTTTGCCGAGGCGGTCGCCGGCGG
. : . : . : . : . : . :
JMFS162D07+ CGTGGCCGATATCAGCGGCGAAGCCAATGAGGAAGACAGCGAAAATGACGAGCAAGGCGC
JMSF026M02+ CGTGGCCGATATCAGCGGCGAAGCCAATGAGGAAGACAGCGAAAATGANGAGCAAGGCGC
JMFS005A03+ CGTGGCCGATATCAGCGGCGAAGCCAATGAGGAAGACAGCGANAATGACGAGCAAGGCGC
JMSF018F15+ CGTGGCCGATATCAGCGGCGAAGCCAATGAGGAAGACAGCGAAAATGACGAGCAAGGCGC
____________________________________________________________
consensus CGTGGCCGATATCAGCGGCGAAGCCAATGAGGAAGACAGCGAAAATGACGAGCAAGGCGC
. : . : . : . : . : . :
JMFS162D07+ CGGAAGCAATAAAGGGGCGGCGGCGACCGAAACGCCAAGTGCAATTGTCGCTGTAGTAGC
JMSF026M02+ CGGAAGCAATAAAGGGGCGGCGGCGACCGAAACGCCAAGTGCAATTGTCGCTGTAGTAGC
JMFS005A03+ CGGAAGCAATAAAGGGGCGGCGGCGACCGAAACGCCAAGTGCAATTGTCGCTGTAGTAGC
JMSF018F15+ CGGAAGCAATAAAGGGGCGGCGGCGACCGAAACGCCAAGTGCAATTGTCGCTGTAGTAGC
____________________________________________________________
consensus CGGAAGCAATAAAGGGGCGGCGGCGACCGAAACGCCAAGTGCAATTGTCGCTGTAGTAGC
. : . : . : . : . : . :
JMFS162D07+ CGACCAGGGGCTGAACAATCATGCCGGAGATGGGCCCACAAAGCCACATAAAGGAGGCGA
JMSF026M02+ CGACCAGGGGNTGAACAATCATGCCGGAGATGGGCCCACAAAGCCACATAAAGGAGGCGA
JMFS005A03+ CGACCAGGGGCTGAACAATCATGCCGGAGATGGGCCCACAAAGCCACATAAAGGAGGCGA
JMSF008B03+ AATCATGCCGGAGATGGGCCCACNAAGCCACATAAAGGAGGCGA
JMSF018F15+ CGACCAGGGGCTGAACAATCATGCCGGAGATGGGCCCACAAAGCCACATAAAGGAGGCGA
____________________________________________________________
consensus CGACCAGGGGCTGAACAATCATGCCGGAGATGGGCCCACAAAGCCACATAAAGGAGGCGA
. : . : . : . : . : . :
JMFS162D07+ ATTTGTGCGGGATTCCGAGCAGCTGGACGTAAGGGGTGAGGAGGGAGAGCTGCAGGGCCC
JMSF026M02+ ATTTGTGCGGGATTCCGAGCAGCTGGACGTAAGGGGTGAGGAGGGAGAGCTGCAGGGCCC
JMFS005A03+ ATTTGTGCGGGATTCCGAGCAGCTGGACGTAAGGGGTGAGGAGGGAGAGCTGCAGGGCCC
JMSF008B03+ ATTTGTGCGGGATTCCGAGCAGCTGGACGTAAGGGGTGAGGAGGGAGAGCTGCAGGGCCC
JMSF018F15+ ATTTGTGCGGGATTCCGAGCAGCTGGACGTAAGGGGTGAGGAGGGAGAGCTGCAGGGCCC
____________________________________________________________
consensus ATTTGTGCGGGATTCCGAGCAGCTGGACGTAAGGGGTGAGGAGGGAGAGCTGCAGGGCCC
. : . : . : . : . : . :
JMFS162D07+ ACCCGAATTGGACTCCCGCCGCAATGGACGCCACCATTACTATCTTCCATATCGGCGTCT
JMSF026M02+ ACCCGAATTGGACTCCCGCCGCAATGGACGCCACCATTACTATCTTCCATATCGGCGTCT
JMFS005A03+ ACCCGAATTGGACTCCCGCCGCAATGGACGCCACCATTACTATCTTCCATATCGGCGTCT
JMSF008B03+ ACCCGAATTGGACTCCCGCCGCAATGGACGCCACCATTACTATCTTCCATATCGGCGTCT
JMSF018F15+ ACCCGAATTGGACTCCCGCCGCAATGGACGCCACCATTACTATCTTCCATATCGGCGTCT
____________________________________________________________
consensus ACCCGAATTGGACTCCCGCCGCAATGGACGCCACCATTACTATCTTCCATATCGGCGTCT
. : . : . : . : . : . :
JMFS162D07+ GCCCCGCCGCCGCCGCCTCCTCCTCCGCCGGCAACGCGTTCGCCACTTGCAGGGAGGATT
JMSF026M02+ GCCCCGCCGCCGCCGCCTCCTCCTCCGCCGGCAACGCGTTCGCCACTTGCAGGGAGGATT
JMFS005A03+ GCCCCGCCGCCGCCGCCTCCTCCTCCGCCGGCAACGCGTTCGCCACTTGCAGGGAGGATT
JMSF008B03+ GCCCCGCCGCCGCCGCCTCCTCCTCCGCCGGCAACGCGTTCGCCACTTGCAGGGAGGATT
JMSF018F15+ GCCCCGCCGCCGCCGCCTCCTCCTCCGCCGGCAACGCGTTCGCCACTTGCAGGGAGGATT
____________________________________________________________
consensus GCCCCGCCGCCGCCGCCTCCTCCTCCGCCGGCAACGCGTTCGCCACTTGCAGGGAGGATT
. : . : . : . : . : . :
JMFS162D07+ TTCCGTTAACGGAGTTTGTCTCCATATCTATTTCACTAACTGTAACCTTTTACAGTTCAA
JMSF026M02+ TTCCGTTAACGGAGTTTGTCTCCATATCTATTTCACTAACTGTAACCTTTTNCAGTTCAA
JMFS005A03+ TTCCGTTAACGGAGTTTGTCTCCATATCTATTTCACTAACTGTAACCTTTTACAGTTCAA
JMSF008B03+ TTCCGTTAACGGAGTTTGTCTCCATATCTATTTCACTAACTGTAACCTTTTACAGTTCAA
JMSF018F15+ TTCCGTTAACGGAGTTTGTCTCCATATCTATTTCACTAACTGTAACCTTTTACAGTTCAA
____________________________________________________________
consensus TTCCGTTAACGGAGTTTGTCTCCATATCTATTTCACTAACTGTAACCTTTTACAGTTCAA
. : . : . : . : . : . :
JMFS162D07+ TGAAAATGATTATATTCTA
JMSF026M02+ TGAAAATGATTATATTCTAGTAATCTCACCTTAGAAAAGCTAAGGGTTAGTGTACTTATC
JMFS005A03+ TGAAAATGATTATATTCTAGTAATCTCACCTTAGAAAAGCTAA
JMSF008B03+ TGAAAATGATTATATTCTAGTAATCTCACCTTAGAAAAGCTAAGGGTTAGTGTACTTATC
JMSF018F15+ TGAAAATGATTATATTCTAGTAATCTCACCTTAGAAAAGCTAAGGGTTAGTGTACTTATC
____________________________________________________________
consensus TGAAAATGATTATATTCTAGTAATCTCACCTTAGAAAAGCTAAGGGTTAGTGTACTTATC