Contig 002189:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045E20Sequence636002189 (2)ref|XP_011086259.1|4e-117PREDICTED: transcriptional adapter ADA2b-like [Sesamum indicum]643005521 (2)
JMSF018C04Sequence280002189 (2)ref|XP_011086259.1|7e-06PREDICTED: transcriptional adapter ADA2b-like [Sesamum indicum]750024532ref|XP_009609288.1|2e-69PREDICTED: transcriptional adapter ADA2b isoform X2 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF045E20+                GCTAGTTCCCCAAGTGAAACAAATCCTTTCTTATCTTCACCATTTCTNNTACTCA
                      ____________________________________________________________
consensus                  GCTAGTTCCCCAAGTGAAACAAATCCTTTCTTATCTTCACCATTTCTNNTACTCA
 
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JMFF045E20+           TGGCAAGGAGTTCTTCCCTGTTTCTCCCAACAACGTGTGTCATATCCGGCAGAGGAAAGT
                      ____________________________________________________________
consensus             TGGCAAGGAGTTCTTCCCTGTTTCTCCCAACAACGTGTGTCATATCCGGCAGAGGAAAGT
 
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JMFF045E20+           AGGGGGAGTTCAAGTACGCACTCCTATAGTGTTCAATGCATGCATCTTTGGTCTTTGTCC
                      ____________________________________________________________
consensus             AGGGGGAGTTCAAGTACGCACTCCTATAGTGTTCAATGCATGCATCTTTGGTCTTTGTCC
 
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JMFF045E20+           CAACATGCTCGCCAACTTCTGCCCACTTACCAATGCCATACATTTCAATACCCTCTAAAA
                      ____________________________________________________________
consensus             CAACATGCTCGCCAACTTCTGCCCACTTACCAATGCCATACATTTCAATACCCTCTAAAA
 
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JMFF045E20+           GTAACATTTCTTCATCAGCATTCCAGTCTGGACATATAAGGGGAAAAGATAAGATATCCA
                      ____________________________________________________________
consensus             GTAACATTTCTTCATCAGCATTCCAGTCTGGACATATAAGGGGAAAAGATAAGATATCCA
 
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JMFF045E20+           TAACCCTGTAAGGATGATTGCTTTTGTGAGGCTGCACTTCAGCACCGACTGAGAAGCACT
                      ____________________________________________________________
consensus             TAACCCTGTAAGGATGATTGCTTTTGTGAGGCTGCACTTCAGCACCGACTGAGAAGCACT
 
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JMFF045E20+           CTATGCATAGGTCAAAATCAGAACACACCGCACATTTGATACGGATTCTCCCAGTAATAT
                      ____________________________________________________________
consensus             CTATGCATAGGTCAAAATCAGAACACACCGCACATTTGATACGGATTCTCCCAGTAATAT
 
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JMFF045E20+           CTTTGTTGCAATAGTTGCAGTGGTACGAAGCTGGTTTGCCTTCACCTGACCCTTGGCCAG
                      ____________________________________________________________
consensus             CTTTGTTGCAATAGTTGCAGTGGTACGAAGCTGGTTTGCCTTCACCTGACCCTTGGCCAG
 
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JMFF045E20+           CTGTAATGTAATCTAAATTTTCTCCATTCGAGGCATTCTTTTTCCTCCTTGATCTTTGAC
JMSF018C04+                               TCTCCATTCGAGGCATTCTTTTTCCTCCTTGATCTTTGAC
                      ____________________________________________________________
consensus             CTGTAATGTAATCTAAATTTTCTCCATTCGAGGCATTCTTTTTCCTCCTTGATCTTTGAC
 
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JMFF045E20+           TGGGATCTTCTTCCGCGTGAAAATTTCCGCGAGACCGACCCATTCACTTTCCGAAGCTCG
JMSF018C04+           TGGGATCTTCTTCCGCGTGAAAATTTCCGCGAGACCGACCCATTCACTTTCCGAAGCTCG
                      ____________________________________________________________
consensus             TGGGATCTTCTTCCGCGTGAAAATTTCCGCGAGACCGACCCATTCACTTTCCGAAGCTCG
 
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JMFF045E20+           AAGACCTCAAAGAGCTACGTATATATGCGTATGAATATGCT                   
JMSF018C04+           AAGACCTCAAAGAGCTACGTATATATGCGTATGAATATGCTTGTTTTCAGGTTGTTCGGG
                      ____________________________________________________________
consensus             AAGACCTCAAAGAGCTACGTATATATGCGTATGAATATGCTTGTTTTCAGGTTGTTCGGG
 
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JMSF018C04+           GGTGCAAAACCCTAAATTAAACTGGGTTAGTGAATAGTGACGAAGATTGAAGACACCCAG
                      ____________________________________________________________
consensus             GGTGCAAAACCCTAAATTAAACTGGGTTAGTGAATAGTGACGAAGATTGAAGACACCCAG
 
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JMSF018C04+           CAGAGAGTCAATGAATTTTAGTTTCCAGTTTTGGGGGTTTTCTTAATTGAATTCTCAATC
                      ____________________________________________________________
consensus             CAGAGAGTCAATGAATTTTAGTTTCCAGTTTTGGGGGTTTTCTTAATTGAATTCTCAATC