Contig 002188:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF017P07+                                                        TATTGTACTACCCAC
                      ____________________________________________________________
consensus                                                          TATTGTACTACCCAC
 
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JMSF017P07+           CTCTCTATAACAGTTTCCGATAATGTCCCACCCAATGTGGAACTCAAATAAGGCTCAGAT
                      ____________________________________________________________
consensus             CTCTCTATAACAGTTTCCGATAATGTCCCACCCAATGTGGAACTCAAATAAGGCTCAGAT
 
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JMSF017P07+           GAAGAATTAGGTTTGTCTTGCACCAGCATTATATCAATAATCATTGGCTCCATCAAATTC
                      ____________________________________________________________
consensus             GAAGAATTAGGTTTGTCTTGCACCAGCATTATATCAATAATCATTGGCTCCATCAAATTC
 
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JMSF008B06+                                     AGCAGCAGGACGATCCCCCAACACCAAATTGAAC
JMSF017P07+           CTGTGCCAAAAACTCAAATTATCAAGAGCAGCAGGACGATCCCCCAACACCAAATTGAAC
                      ____________________________________________________________
consensus             CTGTGCCAAAAACTCAAATTATCAAGAGCAGCAGGACGATCCCCCAACACCAAATTGAAC
 
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JMSF008B06+           CATCTGTCACTCTTTTTCAGTTCTCCACTGCGTCCATATGGTCGCATCGAAGGAATCCTT
JMSF009B06+                                  TCCACTGCGTCCATATGGTCGCATCGAAGGAATCCTT
JMSF017P07+           CATCTGTCACTCTTTTTCAGTTCTCCACTGCGTCCATATGGTCGCATCGAAGGAATCCTT
                      ____________________________________________________________
consensus             CATCTGTCACTCTTTTTCAGTTCTCCACTGCGTCCATATGGTCGCATCGAAGGAATCCTT
 
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JMSF008B06+           GAATCCAATACTATATGCAAGCTCTTCAAAAGAAACTGGGAAATAATTTGCTCAAACCTT
JMSF009B06+           GAATCCAATACTATATGCAAGCTCTTCAAAAGAAACTGGGAAATAATTTGCTCAAACCTT
JMSF017P07+           GAATCCAATACTATATGCAAGCTCTTCAAAAGAAACTGGGAAATAATTTGCTCAAACCTT
                      ____________________________________________________________
consensus             GAATCCAATACTATATGCAAGCTCTTCAAAAGAAACTGGGAAATAATTTGCTCAAACCTT
 
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JMSF008B06+           CCCAATTCACCCTGAGGGTAACTCTGTGTATCCATGGAAACAAATTTGGAGCATCAATCT
JMSF009B06+           CCCAATTCACCCTGAGGGTAACTCTGTGTATCCATGGAAACAAATTTGGAGCATCAATCT
JMSF017P07+           CCCAATTCACCCTGAGGGTAACTCTGTGTATCCATGGAAACAAATTTGGAGCATCAATCT
                      ____________________________________________________________
consensus             CCCAATTCACCCTGAGGGTAACTCTGTGTATCCATGGAAACAAATTTGGAGCATCAATCT
 
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JMSF008B06+           TATTTCCTGTCCTCAACCATGTCCAATTGGGAGAAAAGTGAGGGACAGAGATCCCGAAGT
JMSF009B06+           TATTTCCTGTCCTCAACCATGTCCAATTGGGAGAAAAGTGAGGGACAGAGATCCCGAAGT
JMSF017P07+           TATTTCCTGTCCTCAACCATGTCCAATTGGGAGAAAAGTGAGGGACAGAGATCCCGAAGT
                      ____________________________________________________________
consensus             TATTTCCTGTCCTCAACCATGTCCAATTGGGAGAAAAGTGAGGGACAGAGATCCCGAAGT
 
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JMSF008B06+           AGAAGGAAACAAT                                               
JMSF009B06+           AGAAGGAAACAAT                                               
JMSF017P07+           AGAAGGAAACAATGGAAGGGAGATTCCGCGTCAAACTGAAGGTGTAGCCTGCGGCCTGCC
                      ____________________________________________________________
consensus             AGAAGGAAACAATGGAAGGGAGATTCCGCGTCAAACTGAAGGTGTAGCCTGCGGCCTGCC