Contig 002187:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014M06Sequence471002187 (4)ref|XP_009804329.1|1e-50PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris]723007082 (3)ref|XP_011098127.1|7e-84PREDICTED: low affinity sulfate transporter 3 [Sesamum indicum]
JMSF017N03Sequence526002187 (4)ref|XP_009804329.1|1e-56PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris]770007082 (3)ref|XP_011098127.1|2e-85PREDICTED: low affinity sulfate transporter 3 [Sesamum indicum]
JMSF018J18Sequence489002187 (4)ref|XP_009804329.1|4e-49PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris]
JMSF027O03Sequence673002187 (4)ref|XP_009593440.1|2e-85PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis]739007082 (3)ref|XP_011098127.1|2e-79PREDICTED: low affinity sulfate transporter 3 [Sesamum indicum]

Alignment

This contig is upended


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JMSF027O03+                                                          TGGAAAATACCAG
                      ____________________________________________________________
consensus                                                            TGGAAAATACCAG
 
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JMSF027O03+           CAAAGAAGGTGACAGTGAAAACAATGTTTCTGTAAGCAACAGGATCCTGTGCAGGATCCA
                      ____________________________________________________________
consensus             CAAAGAAGGTGACAGTGAAAACAATGTTTCTGTAAGCAACAGGATCCTGTGCAGGATCCA
 
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JMSF027O03+           CAACCTTGGAAACCATTGCAGACAGCAACATAGATACAACAGCAACGGGGCCAATGGCTA
                      ____________________________________________________________
consensus             CAACCTTGGAAACCATTGCAGACAGCAACATAGATACAACAGCAACGGGGCCAATGGCTA
 
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JMSF027O03+           TTTCACGCGAACTCCCCATCAAAGCGTATATTAAAGGCGGGACAACACTCGTATACAGGC
JMSF018J18+                                                             GTATACAGGC
JMSF014M06+                                                             GTATACAGGC
JMSF017N03+                         CCCATCAAAGCGTATATTAAAGGCGGGACAACACTCGTATACAGGC
                      ____________________________________________________________
consensus             TTTCACGCGAACTCCCCATCAAAGCGTATATTAAAGGCGGGACAACACTCGTATACAGGC
 
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JMSF027O03+           CATACTGAGGGTCAAGCTTGGCAAGATTAGCATATCCAATACTCTGGGGAATGCAAAGGC
JMSF018J18+           CATACTGAGGGTCAAGCTTGGCAAGATTAGCATATCCAATACTCTGGGGAATGCAAAGGC
JMSF014M06+           CATACTGAGGGTCAAGCTTGGCAAGATTAGCATATCCAATACTCTGGGGAATGCAAAGGC
JMSF017N03+           CATACTGAGGGTCAAGCTTGGCAAGATTAGCATATCCAATACTCTGGGGAATGCAAAGGC
                      ____________________________________________________________
consensus             CATACTGAGGGTCAAGCTTGGCAAGATTAGCATATCCAATACTCTGGGGAATGCAAAGGC
 
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JMSF027O03+           TGGCAAGAGTGAGGCCAGCCATTAAGTCTTTCTTGAACTTAGTTGCCTTGTAGTTTCTGC
JMSF018J18+           TGGCAAGAGTGAGGCCAGCCATTAAGTCTTTCTTGAACTTAGTTGCCTTGTAGTTTCTGC
JMSF014M06+           TGGCAAGAGTGAGGCCAGCCATTAAGTCTTTCTTGAACTTAGTTGCCTTGTAGTTTCTGC
JMSF017N03+           TGGCAAGAGTGAGGCCAGCCATTAAGTCTTTCTTGAACTTAGTTGCCTTGTAGTTTCTGC
                      ____________________________________________________________
consensus             TGGCAAGAGTGAGGCCAGCCATTAAGTCTTTCTTGAACTTAGTTGCCTTGTAGTTTCTGC
 
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JMSF027O03+           CCCATTTGAGGATTGGGAACAGGCCTTGCAGGAAAGAAACAGCAAACCCAGATGGGGTTT
JMSF018J18+           CCCATTTGAGGATTGGGAACAGGCCTTGCAGGAAAGAAACAGCAAACCCAGATGGGGTTT
JMSF014M06+           CCCATTTGAGGATTGGGAACAGGCCTTGCAGGAAAGAAACAGCAAACCCAGATGGGGTTT
JMSF017N03+           CCCATTTGAGGATTGGGAACAGGCCTTGCAGGAAAGAAACAGCAAACCCAGATGGGGTTT
                      ____________________________________________________________
consensus             CCCATTTGAGGATTGGGAACAGGCCTTGCAGGAAAGAAACAGCAAACCCAGATGGGGTTT
 
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JMSF027O03+           TCTGGGTTTTAGATAAAGAAGAAGAAGAAGAAAGGGTGTTTGCATCTGGGAGAAGAGTGG
JMSF018J18+           TCTGGGTTTTAGATAAAGAAGAAGAAGAAGAGAGGGTGTTTGCATCTGGGAGAAGAGTGG
JMSF014M06+           TCTGGGTTTTAGATAAAGAAGAAGAAGAAGAGAGGGTGTTTGCATCTGGGAGAAGAGTGG
JMSF017N03+           TCTGGGTTTTAGATAAAGAAGAAGAAGAAGAAAGGGTGTTTGCATCTGGGAGAAGAGTGG
                      ____________________________________________________________
consensus             TCTGGGTTTTAGATAAAGAAGAAGAAGAAGAGAGGGTGTTTGCATCTGGGAGAAGAGTGG
 
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JMSF027O03+           CCTTGAGGGAAGTGATGAGTTGTTGGCATAGGGTGGGGGGTTGAGGAGAGTCAAGAAGCC
JMSF018J18+           CCTTGAGGGAAGTGATGAGTTGTTGGCATAGGGTGGGGGGTTGAGGAGAGTCAAGAAGCC
JMSF014M06+           CCTTGAGGGAAGTGATGAGTTGTTGGCATAGGGTGGGGGGTTGAGGAGAGTCAAGAAGCC
JMSF017N03+           CCTTGAGGGAAGTGATGAGTTGTTGGCATAGGGTGGGGGGTTGAGGAGAGTCAAGAAGCC
                      ____________________________________________________________
consensus             CCTTGAGGGAAGTGATGAGTTGTTGGCATAGGGTGGGGGGTTGAGGAGAGTCAAGAAGCC
 
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JMSF027O03+           ATTGAGCTCTCTCCTTTCTTCTGCCATCGTAATTTGCAGAAGCATTCAGGTGGTCAAGCT
JMSF018J18+           ATTGAGCTCTCTCCTTTCTTCTGCCATCGTAATTTGCAGAAGCATTCAGGTGGTCAAGCT
JMSF014M06+           ATTGAGCTCTCTCCTTTCTTCTGCCATCGTAATTTGCAGAAGCATTCAGGTGGTCAAGCT
JMSF017N03+           ATTGAGCTCTCTCCTTTCTTCTGCCATCGTAATTTGCAGAAGCATTCAGGTGGTCAAGCT
                      ____________________________________________________________
consensus             ATTGAGCTCTCTCCTTTCTTCTGCCATCGTAATTTGCAGAAGCATTCAGGTGGTCAAGCT
 
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JMSF027O03+           CAATGCTGAAGCTCTCACTACCCATATATATTATTATTGATTTCAGATCAGAGTTTTGTT
JMSF018J18+           CAATGCTGAAGCTCTCACTACCCATATATATTATTATTGATTTCAGATCAGAGTTTTGTT
JMSF014M06+           CAATGCTGAAGCTCTCACTACCCATATATATTATTATTGATTTCAGATCAGAGTTTTGTT
JMSF017N03+           CAATGCTGAAGCTCTCACTACCCATATATATTATTATTGATTTCAGATCAGAGTTTTGTT
                      ____________________________________________________________
consensus             CAATGCTGAAGCTCTCACTACCCATATATATTATTATTGATTTCAGATCAGAGTTTTGTT
 
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JMSF027O03+           TAATTTGAAGTGTTTGGGTTAACTCTTGGGATCGATCACTGAATGTGATGATGAT     
JMSF018J18+           TAATTTGAAGTGTTTGGGTTAACTCTTGGGATCGATCACTGAATGTGATGATGAT     
JMSF014M06+           TAATTTGAAGTGTTTGGGTTAACTCTTGGGATCGATC                       
JMSF017N03+           TAATTTGAAGTGTTTGGGTTAACTCTTGGGATCGATCACTGAATGTGATGATGATCACTC
                      ____________________________________________________________
consensus             TAATTTGAAGTGTTTGGGTTAACTCTTGGGATCGATCACTGAATGTGATGATGATCACTC