Contig 002186:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS017B11+                                                                GAATCAA
                      ____________________________________________________________
consensus                                                                  GAATCAA
 
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JMFS017B11+           GTCAGCCAAAGCAGCCATCTGAACAGAATCGCTCTGTGTCATCCGAACAAAAAAGGGGAA
                      ____________________________________________________________
consensus             GTCAGCCAAAGCAGCCATCTGAACAGAATCGCTCTGTGTCATCCGAACAAAAAAGGGGAA
 
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JMFS017B11+           CTGAGATGCAGACAGGCTCGGATCGCTAGCAGAAAACGAGATAAGAGGCACTTCAAGACC
JMFF046M08+                                                                CAAGACC
                      ____________________________________________________________
consensus             CTGAGATGCAGACAGGCTCGGATCGCTAGCAGAAAACGAGATAAGAGGCACTTCAAGACC
 
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JMFS017B11+           AGTAGCTATGAAAGAAATCATATGAACTATTGATGAGGACTCTGGACCTATAATTGCCAC
JMFF046M08+           AGTAGCTATGAAAGAAATCATATGAACTATTGATGAGGACTCTGGACCTATAATTGCCAC
                      ____________________________________________________________
consensus             AGTAGCTATGAAAGAAATCATATGAACTATTGATGAGGACTCTGGACCTATAATTGCCAC
 
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JMFS017B11+           CGCTTTCTTATCGATAAC--------CTCCAATGGACCCCAAAAAAGCACTGGAATTTGC
JMFF046M08+           CGCTTTCTTATCGATAACCTGAAACGCTCCAATGGACCCCAAAAAAGCACTGGAATTTGC
                      ____________________________________________________________
consensus             CGCTTTCTTATCGATAACCTGAAACGCTCCAATGGACCCCAAAAAAGCACTGGAATTTGC
 
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JMFS017B11+           ATCCACCTTGATCAAGTTCAGCTTTGTTCCATTCAGAATAGAAGGATCACCATTGACATC
JMFF046M08+           ATCCACCTTGATCAAGTTCAGCTTTGTTCCATTCAGAATAGAAGGATCACCATTGACATC
                      ____________________________________________________________
consensus             ATCCACCTTGATCAAGTTCAGCTTTGTTCCATTCAGAATAGAAGGATCACCATTGACATC
 
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JMFS017B11+           AGAGACTGCAATCTCCATGGCTGTCTTTGCTGCCCTCCCTGAGACTGAATTGAAGGTGAA
JMFF046M08+           AGAGACTGCAATCTCCATGGCTGTCTTTGCTGCCCTCCCTGAGACTGAATTGAAGGTGAA
                      ____________________________________________________________
consensus             AGAGACTGCAATCTCCATGGCTGTCTTTGCTGCCCTCCCTGAGACTGAATTGAAGGTGAA
 
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JMFS017B11+           AACAGCCCCAACATTCACAACAGCAGGCCTCTCACACTTCACAGTCACAGTAAGCAACCC
JMFF046M08+           AACAGCCCCAACATTCACAACAGCAGGCCTCTCACACTTCACAGTCACAGTAAGCAACCC
JMSF017M23+                                                  CACAGTCACAGTAAGCAACCC
                      ____________________________________________________________
consensus             AACAGCCCCAACATTCACAACAGCAGGCCTCTCACACTTCACAGTCACAGTAAGCAACCC
 
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JMFS017B11+           CAGAACCAAAATAGCCATACCCACAGCCAAAAGGAGCTTCATTCTTGATGCTTCAAAGGC
JMFF046M08+           CAGAACCAAAATAGCCATACCCACAGCCAAAAGAAGCTTCATTCTTGATGCTTCAAAGGC
JMSF017M23+           CAGAACCAAAATAGCCATACCCACAGCCAAAAGAAGCTTCATTCTTGATGCTTCAAAGGC
                      ____________________________________________________________
consensus             CAGAACCAAAATAGCCATACCCACAGCCAAAAGAAGCTTCATTCTTGATGCTTCAAAGGC
 
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JMFS017B11+           CAAAGACAACAGAGCCACAAACCTCTAATCAAGAAACTGTTTCATGTGAAATATTTGGAG
JMFF046M08+           CAAAGACAACAGAGCCACAAACCTCTAATCAAGAAGCTGTTTCATGTGAAATATTTGGAG
JMSF017M23+           CAAAGACAACAGAGCCACAAACCTCTAATCAAGAAACTGTTTCATGTGAAATATTTGGAG
                      ____________________________________________________________
consensus             CAAAGACAACAGAGCCACAAACCTCTAATCAAGAAACTGTTTCATGTGAAATATTTGGAG
 
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JMFS017B11+           AAACTAAGCACAACCCAGAGTTGAAGTGAGCATAATTTTGTGAAAAACATGGTCTTTGAG
JMFF046M08+           AAACTAAGCACAACCCAGAGTTGAAGTGAGCATAATTTTGTGAAAAACATGGTCTTTGAG
JMSF017M23+           AAACTAAGCACAACCCAGAGTTGAAGTGAGCATAATTTTGTGAAAAACATGGTCTTTGAG
                      ____________________________________________________________
consensus             AAACTAAGCACAACCCAGAGTTGAAGTGAGCATAATTTTGTGAAAAACATGGTCTTTGAG
 
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JMFS017B11+           CAGCCTCTTGAGAATTCAA                                         
JMFF046M08+           CAGCCTCTTGAGAATTCAAAAGTGGCAGGTATTGCTGTGTGGTTGGTGTGAAAGGC    
JMSF017M23+           CAGCCTCTTGAGAATTCAAAAGTGGCAGGTATTGCTGTGTGGTTGGTGTGAAAGGCACTC
                      ____________________________________________________________
consensus             CAGCCTCTTGAGAATTCAAAAGTGGCAGGTATTGCTGTGTGGTTGGTGTGAAAGGCACTC