| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004I24 | Sequence | 311 | 002183 (9) | ref|XP_008466907.1| | 9e-44 | PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2-like, partial [Cucumis m | 721 | 002183 (9) | ref|XP_009592777.1| | 5e-119 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] |
| JMFF021P19 | Sequence | 546 | 002183 (9) | ref|XP_009592777.1| | 1e-89 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] | |||||
| JMSF016H05 | Sequence | 535 | 002183 (9) | ref|XP_009592777.1| | 1e-92 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] | 780 | 002183 (9) | ref|XP_009592777.1| | 4e-130 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] |
| JMSF017H05 | Sequence | 522 | 002183 (9) | ref|XP_009592777.1| | 7e-89 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] | 725 | 002183 (9) | ref|XP_009592777.1| | 5e-120 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] |
| JMSF051D22 | Sequence | 669 | 002183 (9) | ref|XP_009592777.1| | 1e-118 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] | 766 | 002183 (9) | ref|XP_009592777.1| | 5e-121 | PREDICTED: hydroxyphenylpyruvate reductase [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF051D22- AT
____________________________________________________________
consensus AT
. : . : . : . : . : . :
rJMSF051D22- TTCAATCAGTGAAGCTACCAGCCTCTCAATGAGAGAACTTATTCATTTTACATGTTTGTC
rJMSF017H05- ATGAGAGAANTTATTCATTTTACATGTTTGTC
rJMSF016H05- CTCTCAATGAGAGAACTTATTCATTTTACATGTTTGTC
____________________________________________________________
consensus TTCAATCAGTGAAGCTACCAGCCTCTCAATGAGAGAACTTATTCATTTTACATGTTTGTC
. : . : . : . : . : . :
rJMSF051D22- AAGTTCAGAGGCAATGTGCTCTGGTGATAGTAAAGGCAGGCCCCCAAACAATCATGGGTG
rJMSF017H05- AAGTTCAGAGGCAATGTGCTCTGGTGATAGTAAAGGCAGGCCCCCAAACAATCATGGGTG
rJMFF004I24- AGTTCAGAGGCAATGTGCTCTGGTGATAGTAAAGGCAGGCCCCCAAACAATCATGGGTG
rJMSF016H05- AAGTTCAGAGGCAATGTGCTCTGGTGATAGTAAAGGCAGGCCCCCAAACAATCATGGGTG
____________________________________________________________
consensus AAGTTCAGAGGCAATGTGCTCTGGTGATAGTAAAGGCAGGCCCCCAAACAATCATGGGTG
. : . : . : . : . : . :
rJMSF051D22- TGTTCATAACAAATTCAGACCACTGGGGTTAATAGTGGTTTGTTAAGAAAGTGAGCTTCT
rJMSF017H05- TGTTCATAACAAATTCAGACCACTGGGGTTAATAGTGGTTTGTTAAGAAAGTGAGCTTCT
rJMFF004I24- TGTTCATAACAAATTCAGACCACTGGGGTTAATAGTGGTTTGTTAAGAAAGTGAGCTTCT
rJMSF016H05- TGTTCATAACAAATTCAGACCACTGGGGTTAATAGTGGTTTGTTAAGAAAGTGAGCTTCT
____________________________________________________________
consensus TGTTCATAACAAATTCAGACCACTGGGGTTAATAGTGGTTTGTTAAGAAAGTGAGCTTCT
. : . : . : . : . : . :
rJMSF051D22- AAGTTTCCAATCACAAGGTCAGCCATGGCCTTGCGCGTTTCCATTGTTCCACTTCCAACA
rJMSF017H05- AAGTTTCCAATCACAAGGTCAGCCATGGCCTTGCGCGTTTCCATTGTTCCACTTCCAACA
rJMFF004I24- AAGTTTCCAATCACAAGGTCAGCCATGGCCTTGCGCGTTTCCATTGTTCCACTTCCAACA
rJMSF016H05- AAGTTTCCAATCACAAGGTCAGCCATGGCCTTGCGCGTTTCCATTGTTCCACTTCCAACA
____________________________________________________________
consensus AAGTTTCCAATCACAAGGTCAGCCATGGCCTTGCGCGTTTCCATTGTTCCACTTCCAACA
. : . : . : . : . : . :
rJMSF051D22- TGGGGCAGCAGCACAACGTTATCAAGTCCAAAGAGCTCCTCAGGCACTTCAGGTTCATTT
rJMSF017H05- TGGGGCAGCAGCACAACGTTATCAAGTCCAAAGAGCTCCTCAGGCACTTCAGGTTCATTT
rJMFF004I24- TGGGGCAGCAGCACAACGTTATCAAGTCCAAAGAGCTCCTCAGGCACTTCAGGTTCATTT
rJMSF016H05- TGGGGCAGCAGCACAACGTTATCAAGTCCAAAGAGCTCCTCAGGCACTTCAGGTTCATTT
____________________________________________________________
consensus TGGGGCAGCAGCACAACGTTATCAAGTCCAAAGAGCTCCTCAGGCACTTCAGGTTCATTT
. : . : . : . : . : . :
rJMSF051D22- TCAAATACGTCGAGCCCAGCACCACCCAAGCGGCCTTCAACAAGAGCAGATACCATCTCG
rJMSF017H05- TCAAATACGTCGAGCCCAGCACCACCCAAGCGGCCTTCAACAAGAGCAGATACCATCTCG
rJMFF004I24- TCAAATACGTCGAGCCCAGCACCACCCNAGNGGCCTTCAACAAGAGCAGATACCATCTCG
rJMSF016H05- TCAAATACGTCGAGCCCAGCACCACCCAAGCGGCCTTCAACAAGAGCAGATACCATCTCG
____________________________________________________________
consensus TCAAATACGTCGAGCCCAGCACCACCCAAGCGGCCTTCAACAAGAGCAGATACCATCTCG
. : . : . : . : . : . :
rJMSF051D22- CGCTCATCAACGTGGGGACCCCTACCAATGTTGATGAGAACTCCTTGTGGACCTAGTGCG
rJMSF017H05- CGCTCATCAACGTGGGGACCCCTACCAATGTTGATGAGAACTCCTTGTGGACCTAGTGCG
rJMFF004I24- CGCTCATCAACGTGGGGACCCCTACCAATGTTGATGAGAACTCCTTGTGGACCTAGTGCG
rJMSF016H05- CGCTCATCAACGTGGGGACCCCTACCAATGTTGATGAGAACTCCTTGTGGACCTAGTGCG
____________________________________________________________
consensus CGCTCATCAACGTGGGGACCCCTACCAATGTTGATGAGAACTCCTTGTGGACCTAGTGCG
. : . : . : . : . : . :
rJMSF051D22- TCGATGACTTCGCGGTTGACAATGTGGCGAGTCTCGGGAGTTAATGCGCACGCAACAACC
rJMSF017H05- TCGATGACTTCGCGGTTGACAATGTGGCGAGTCTCGGGAGTTAATGCGCACGCAACAACC
rJMFF004I24- TCGATGACTTCGCGGTTGACAATGTGGCGAGTCTCGGGAGTTAATGCGCACGCAACAACC
rJMSF016H05- TCGATGACTTCGCGGTTGACAATGTGGCGAGTCTCGGGAGTTAATGCGCACGCAACAACC
JMSF051D22+ CGGGAGTTAATGCGCACGCAACAACC
____________________________________________________________
consensus TCGATGACTTCGCGGTTGACAATGTGGCGAGTCTCGGGAGTTAATGCGCACGCAACAACC
. : . : . : . : . : . :
rJMSF051D22- AAAATCTGACAATTGGAAGCCAACTCTACTACACTGGGGTAGTACTTATACTTGGTGTTT
rJMSF017H05- AAAATCTGACAATTGGAAGCCAACTCTACTACACTGGGGTAGTACTTATACTTGGTGTTT
rJMFF004I24- AAAATCTGACAATTGGAAGCCAACTCTACTACACTGGGGTAGTACTTATACTTGGTGTTT
rJMSF016H05- AAAATCTGACAATTGGAAGCCAACTCTACTACACTGGGGTAGTACTTATACTTGGTGTTT
JMSF051D22+ AAAATCTGACAATTGGAAGCCAACTCTACTACACTGGGGTAGTACTTATACTTGGTGTTT
____________________________________________________________
consensus AAAATCTGACAATTGGAAGCCAACTCTACTACACTGGGGTAGTACTTATACTTGGTGTTT
. : . : . : . : . : . :
rJMSF051D22- GGTTTCTCTGATCTGGTGTGGTAGCAGATTGGACAATCAAAAGCCTCTGCTCTCTTGGCA
rJMSF017H05- GGTTTCTCTGATCTGGTGTGGTAGCAGATTGGACAATCAAAAGCCTCTGCTCTCTTGGCA
rJMFF004I24- GGTTTCTCTGATCTGGTGTGGTAGCAGATTGGACAATCAAAAGCCTCTGCTCTCTTGGCA
rJMSF016H05- GGTTTCTCTGATCTGGTGTGGTAGCAGATTGGACAATCAAAAGCCTCTGCTCTCTTGGCA
JMSF051D22+ GGTTTCTCTGATCTGGTGTGGTAGCAGATTGGACAATCAAAAGCCTCTGCTCTCTTGGCA
JMFF021P19+ CTTGGCA
____________________________________________________________
consensus GGTTTCTCTGATCTGGTGTGGTAGCAGATTGGACAATCAAAAGCCTCTGCTCTCTTGGCA
. : . : . : . : . : . :
rJMSF051D22- ATTGCTAAACCAATTCTT-CCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
rJMSF017H05- ATTGCTAAACCAATTCTT-CCNAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
rJMFF004I24- ATTGCTAAACCAATTCTT-CCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
rJMSF016H05- ATTGCTAAACCAATTCTT-CCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
JMSF051D22+ ATTGCTAAACCAATTCTT-CCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
JMFF021P19+ ATTGCTAAACCAATTCTTCCCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
JMSF016H05+ CTAAACCAATTCTT-CCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
JMSF017H05+ T-CCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
____________________________________________________________
consensus ATTGCTAAACCAATTCTT-CCAAGCCCTATAATTCCAACAGTTTTGCCACTAAACTTGGT
. : . : . : . : . : . :
rJMSF051D22- AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
rJMSF017H05- AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
rJMFF004I24- AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
rJMSF016H05- AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
JMSF051D22+ AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
JMFF021P19+ AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
JMSF016H05+ AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
JMSF017H05+ AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
____________________________________________________________
consensus AGTCAACTTGAAGTTACCCATCTTCCACAACCCTGTCCTCACAAATCGATCACACTCGCA
. : . : . : . : . : . :
rJMSF051D22- AATCCTTCTGAGCACAGCCAGCATCAACCCGAT
rJMSF017H05- AATCCTTCTGAGCACAGCCAGCATCAACCCGATT
rJMFF004I24- AATCCTTCTGAGCACAGCCAGCATCAACCCGATTGCCAAGTCGGCGACGTCCTCCG
rJMSF016H05- AATCCTTCTGAGCACAGCCAGCATCAACCCGATGGCCANGTCGGCGACGTCCTCCGTCAA
JMSF051D22+ AATCCTTCTGAGCACAGCCAGCATCAACCCGATTGCCAAGTCGGCGACGTCCTCCGTCAA
JMFF021P19+ AATCCTTCTGAGCACAGCCAGCATCAACCCGATTGCCAAGTCGGCGACGTCCTCCGTCAA
JMSF016H05+ AATCCTTCTGAGCACAGCCAGCATCAACCCGATTGCCAAGTCGGCGACGTCCTCCGTCAA
JMSF017H05+ AATCCTTCTGAGCACAGCCAGCATCAACCCGATTGCCAAGTCGGCGACGTCCTCCGTCAA
____________________________________________________________
consensus AATCCTTCTGAGCACAGCCAGCATCAACCCGATTGCCAAGTCGGCGACGTCCTCCGTCAA
. : . : . : . : . : . :
rJMSF016H05- GACGTCGGGGGTATGGGTA
JMSF051D22+ GACGTCGGGGGTATTGGTAACCCGAATTCCCTTCTCCCTGCACTTGGCCAAGTCGATCTT
JMFF004I24+ TCTCCCTGCNCTTGCCCAAGTCGATCTT
JMFF021P19+ GACGTCGGGGGTATTGGTAACCCGAATTCCCTTCTCCCTGCACTTGGCCAAGTCGATCTT
JMSF016H05+ GACGTCGGGGGTATTGGTAACCCGAATTCCCTTCTCCCTGCACTTGGCCAAGTCGATCTT
JMSF017H05+ GACGTCGGGGGTATTGGTAACCCGAATTCCCTTCTCCCTGCACTTGGCCAAGTCGATCTT
____________________________________________________________
consensus GACGTCGGGGGTATTGGTAACCCGAATTCCCTTCTCCCTGCACTTGGCCAAGTCGATCTT
. : . : . : . : . : . :
JMSF051D22+ ATCCAAGCCGACGCTGAAACTAGAGACTATCTCCAGCTTGGGGAGCGCATCAATCAGCTC
JMFF004I24+ ATCCAANCCGACGCTGAAACTAGAGACTATCTCCAGCTTGGGGAGCGCATCAATCAGCTC
JMFF021P19+ ATCCAAGCCGACGCTGAAACTAGAGACTATCTCCAGCTTGGGGAGCGCATCAATCAGCTC
JMSF016H05+ ATCCAAGCCGACGCTGAAACTAGAGACTATCTCCAGCTTGGGGAGCGCATCAATCAGCTC
JMSF017H05+ ATCCAAGCCGACGCTGAAACTAGAGACTATCTCCAGCTTGGGGAGCGCATCAATCAGCTC
____________________________________________________________
consensus ATCCAAGCCGACGCTGAAACTAGAGACTATCTCCAGCTTGGGGAGCGCATCAATCAGCTC
. : . : . : . : . : . :
JMSF051D22+ GGCGTCAGCCCCGGCGGAGGCGTTTCCGACGACGGCGCGGATCGCGTTGGCGTTCTCCCT
JMFF004I24+ GGCGTCAGCCCCGGCGGAGGCGTTTCCGACGACGGCGCGGATCGCGTTGGCGTTCTCCCT
JMFF021P19+ GGCGTCAGCCCCGGCGGAGGCGTTTCCGACGACGGCGCGGATCGCGTTGGCGTTCTCCCT
JMSF016H05+ GGCGTCAGCCCCGGCGGAGGCGTTTCCGACGACGGCGCGGATCGCGTTGGCGTTCTCCCT
JMSF017H05+ GGCGTCAGCCCCGGCGGAGGCGTTTCCGACGACGGCGCGGATCGCGTTGGCGTTCTCCCT
____________________________________________________________
consensus GGCGTCAGCCCCGGCGGAGGCGTTTCCGACGACGGCGCGGATCGCGTTGGCGTTCTCCCT
. : . : . : . : . : . :
JMSF051D22+ CAGGAATTCCTTCTTCTGCGGGAAGTTCCAGAAGCGGAAGAGCTTGAACCGCTTGTCGAG
JMFF004I24+ CAGGAATTCCTTCTTCTGCGGGAAGTTCCAGAAGCGGAAGAGCTTGAACCGCTTGTCGAG
JMFF021P19+ CAGGAATTCCTTCTTCTGCGGGAAGTTCCAGAAGCGGAAGAGCTTGAACCGCTTGTCGAG
JMSF016H05+ CAGGAATTCCTTCTTCTGCGGGAAGTTCCAGAAGCGGAAGAGCTTGAACCGCTTGTCGAG
JMSF017H05+ CAGGAATTCCTTCTTNTGCGGGAAGTTCCAGAAGCGGAAGAGCTTGAACCGCTTGTCGAG
____________________________________________________________
consensus CAGGAATTCCTTCTTCTGCGGGAAGTTCCAGAAGCGGAAGAGCTTGAACCGCTTGTCGAG
. : . : . : . : . : . :
JMSF051D22+ TTCCTGTTCCAAGTAAGGGTTCATCGGAATCGCCATCAGCACTCCAATACTCTCCATTTC
JMFF004I24+ TTCCTGTTCCAAGTAAGGGTTCATCGGAATCGCCATCAGCACTCCAATACTCTCCATTTC
JMFF021P19+ TTCCTGTTCCAAGTAAGGGTTCATCGGAATCGCCATCAGCACTCCAATACTCTCCATTTC
JMSF016H05+ TTCCTGTTCCAAGTAAGGGTTCATCGGAATCGCCATCAGCACTCCAATACTCTCCATTTC
JMSF017H05+ TTCCTGTTCCAAGTAAGGGTTCATCGGAATCGCCATCAGCACTCCAATACTCTCCATTTC
____________________________________________________________
consensus TTCCTGTTCCAAGTAAGGGTTCATCGGAATCGCCATCAGCACTCCAATACTCTCCATTTC
. : . : . : . : . : . :
JMSF051D22+ TTCGTCCCAGATCCGGAGAGGACCTCAATTGTGATTTTGCGGT
JMFF004I24+ TTCGTCCCAGATCCGGAGAGGACTTCAATTGTGATTTTGCGGT
JMFF021P19+ TTCGTCCCAGATCCGGAGAGGACTTCAATTGTGATTTTGCGGTGCTTGTGGTTACTGCC
JMSF016H05+ TTCGTCCCAGATCCGGAGAGGACTTCAATTGTGATTTTGCGGTGCTTGTGGTTACTGCC
JMSF017H05+ TTCGTCCCAGATCCGGAGAGGACTTCAATTGTGATTTTGCGGTGCTTGTGGTTACTGCCA
____________________________________________________________
consensus TTCGTCCCAGATCCGGAGAGGACTTCAATTGTGATTTTGCGGTGCTTGTGGTTACTGCCA