Contig 002182:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS014A02Sequence648002182 (2)ref|XP_006342878.1|8e-44PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Solanum tuberosum]
JMSF017F18Sequence382002182 (2)

Alignment

This contig is upended


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JMFS014A02+                        CCAAGTCATAAAGGAAAAATCAAGAACCATGATTGCAGGAGAGATGC
                      ____________________________________________________________
consensus                          CCAAGTCATAAAGGAAAAATCAAGAACCATGATTGCAGGAGAGATGC
 
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JMFS014A02+           TGCAGAGGGAAGAGGGAATTCCTCCATGGAAGCTATTGTTGCTGAAATTTAGACTAACCA
                      ____________________________________________________________
consensus             TGCAGAGGGAAGAGGGAATTCCTCCATGGAAGCTATTGTTGCTGAAATTTAGACTAACCA
 
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JMFS014A02+           AGGTGGTTGCAGGCTGGAAAAATGAAGTCTGGATTGTCCCATTAAAGTGGTTGCTGGAGA
                      ____________________________________________________________
consensus             AGGTGGTTGCAGGCTGGAAAAATGAAGTCTGGATTGTCCCATTAAAGTGGTTGCTGGAGA
 
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JMFS014A02+           GATTCACAGCCCGGATAGAAGATGGCAACCTCTCATCTGATGCAACTTCTCCAGTTAACC
                      ____________________________________________________________
consensus             GATTCACAGCCCGGATAGAAGATGGCAACCTCTCATCTGATGCAACTTCTCCAGTTAACC
 
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JMFS014A02+           GATTATAGCTCAGGTCAATCACCTGCAGGCTATTCAAGGCAGAGAAGAACACATCAGGCA
                      ____________________________________________________________
consensus             GATTATAGCTCAGGTCAATCACCTGCAGGCTATTCAAGGCAGAGAAGAACACATCAGGCA
 
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JMFS014A02+           GAGAACCAGACAGCCTATTGTTTGACAGGTTGAGTTGGGAGAGACTGGTGAGGTTTGCCA
                      ____________________________________________________________
consensus             GAGAACCAGACAGCCTATTGTTTGACAGGTTGAGTTGGGAGAGACTGGTGAGGTTTGCCA
 
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JMFS014A02+           CTGCAGGAGCAATGCTTCCAACAAGGTCCCTTGATGGCAGCCATAGCCGTGTCACTCTCC
                      ____________________________________________________________
consensus             CTGCAGGAGCAATGCTTCCAACAAGGTCCCTTGATGGCAGCCATAGCCGTGTCACTCTCC
 
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JMFS014A02+           CATTTCCATCACACCCCACACCCTCCCACTCACAGCACTCACTTGAATTGGGCCAATCCA
JMSF017F18+                                                 TCACTTGAATTGGGCCAATCCA
                      ____________________________________________________________
consensus             CATTTCCATCACACCCCACACCCTCCCACTCACAGCACTCACTTGAATTGGGCCAATCCA
 
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JMFS014A02+           AGGGAGAAGATGAACTGGAGATGTTAAGGGAGAAGGACACCAAAGCCTCACGGTCAAATT
JMSF017F18+           AGGGAGAAGATGAACTGGAGATGTTAAGGGAGAAGGACNCCAAAGCCTCNCGGTCAAATT
                      ____________________________________________________________
consensus             AGGGAGAAGATGAACTGGAGATGTTAAGGGAGAAGGACACCAAAGCCTCACGGTCAAATT
 
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JMFS014A02+           CATTGCAGGCGCCACTACAGGTAATCACAACAGAAGAAAGAAGTAAAACTGCTGCTATTA
JMSF017F18+           CATTGCNGGNGCCACTNCAGGTAATCNCAACAGAAGAAAGAAGTAAAACTGCTGCTATTA
                      ____________________________________________________________
consensus             CATTGCAGGCGCCACTACAGGTAATCACAACAGAAGAAAGAAGTAAAACTGCTGCTATTA
 
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JMFS014A02+           CCAAGAACCCAAACCCAGAAAGATT-AAACAACAACAGTTATGCCTAGCCAAAGAAGATG
JMSF017F18+           CCAAGAACCCAAACCCNGAAAGATTGAAACAACAACAGTTNTGCCTAGCCAAAGAAGATG
                      ____________________________________________________________
consensus             CCAAGAACCCAAACCCAGAAAGATTGAAACAACAACAGTTATGCCTAGCCAAAGAAGATG
 
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JMFS014A02+           AA                                                          
JMSF017F18+           AATGGAGGGGTCCCCCCNGGAGCATGGCTGCTTTAATAAGCCAATAATATGCCAGACTAA
                      ____________________________________________________________
consensus             AATGGAGGGGTCCCCCCNGGAGCATGGCTGCTTTAATAAGCCAATAATATGCCAGACTAA
 
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JMSF017F18+           TCCGTNGGCCGGCCTTCCAGAAAAAAGNCNCAAAGAAGAAGAAGAAGAAGAAGAGAGTTG
                      ____________________________________________________________
consensus             TCCGTNGGCCGGCCTTCCAGAAAAAAGNCNCAAAGAAGAAGAAGAAGAAGAAGAGAGTTG
 
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JMSF017F18+           AAGATGGCAAGATACTCCAATCAATCATGTGGGGTTATTTTTTTTTTCCCCCACTTCCCC
                      ____________________________________________________________
consensus             AAGATGGCAAGATACTCCAATCAATCATGTGGGGTTATTTTTTTTTTCCCCCACTTCCCC