Contig 002175:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS050H12+                                                            GGTCCTGCCTT
                      ____________________________________________________________
consensus                                                              GGTCCTGCCTT
 
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JMFS050H12+           GTAAGGGCGGGGAGGATGATAAGGCTCATTGCTCTTGCTAAGTTGATAATGATCATTTCC
                      ____________________________________________________________
consensus             GTAAGGGCGGGGAGGATGATAAGGCTCATTGCTCTTGCTAAGTTGATAATGATCATTTCC
 
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JMFS050H12+           CCGCGTTTTTGACGCAGGTATTCCAGACGCATATACAGATGGTCTTGGAAATGAACCGCT
JMFS064G08+                  TTTGACGCAGGTATTCCAGACGCATATACAGATGGTCTTGGAAATGAACCGCT
                      ____________________________________________________________
consensus             CCGCGTTTTTGACGCAGGTATTCCAGACGCATATACAGATGGTCTTGGAAATGAACCGCT
 
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JMFS050H12+           TCCAAGAAGTCCATCATGCTCAGGAGTCTGCCAAGACCGCCGGGGTTGATTTCCATGGCG
JMFS064G08+           TCCAAGAAGTCCATCATGCTCAGGAGTCTGCCAAGACCGCCGGGGTTGATTTCCATGGCG
                      ____________________________________________________________
consensus             TCCAAGAAGTCCATCATGCTCAGGAGTCTGCCAAGACCGCCGGGGTTGATTTCCATGGCG
 
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JMFS050H12+           CTTAACAGATTCTGAATCCCGAGCAGATTGTGTATCGCTTTCCAGATCACTTCGTGCAGA
JMFS064G08+           CCTAACAGATTCTGAATCCCGAGCAGATTGTGTATCGCTTTCCAGATCACTTCGTGCAGA
                      ____________________________________________________________
consensus             CTTAACAGATTCTGAATCCCGAGCAGATTGTGTATCGCTTTCCAGATCACTTCGTGCAGA
 
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JMFS050H12+           GAAACGGTTTTCCCATCTTCCATAAATCACTCTAGTAGGAGGAGATGAACCATAATCATT
JMFS064G08+           GAAACGGTTTTCCCATCTTCCATAAATCACTCTAGTAGGAGGAGATGAACCATAATCATT
                      ____________________________________________________________
consensus             GAAACGGTTTTCCCATCTTCCATAAATCACTCTAGTAGGAGGAGATGAACCATAATCATT
 
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JMFS050H12+           GCGTCTGAAGCCTTGTAAAGGAGGCGCAGCAGCAGAGATTCTTTGGCGATCTGGTTCGTC
JMFS064G08+           GCGTCTGAAGCCTTGTAAAGGAGGCGCAGCAGCAGAGATTCTTTGGCGATCTGGTTCGTC
                      ____________________________________________________________
consensus             GCGTCTGAAGCCTTGTAAAGGAGGCGCAGCAGCAGAGATTCTTTGGCGATCTGGTTCGTC
 
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JMFS050H12+           ATATGGAGTACTATCGAGCTCACTCGGAAGTGCTGGCTCAATCCCACTTGGTAGCTTCTT
JMFF012I05+                                 CTCGGAAGTGCTGGCTCAATCCCACTTGGTAGCTTCTT
JMFS064G08+           ATATGGAGTACTATCGAGCTCACTCGGAAGTGCTGGCTCAATCCCACTTGGTAGCTTCTT
rJMSF030P23-                                CTCGGAAGTGCTGGCTCAATCCCACTTGGTAGCTTCTT
rJMSF016C16-                                CTCGGAAGTGCTGGCTCAATCCCACTTGGTAGCTTCTT
                      ____________________________________________________________
consensus             ATATGGAGTACTATCGAGCTCACTCGGAAGTGCTGGCTCAATCCCACTTGGTAGCTTCTT
 
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JMFS050H12+           ACATATCTCCAATTCACTCAAGGACAAAAGGAACTCCCGTGAATAAGATA          
JMFF012I05+           ACATATCTCCAATTCACTCAAGGACAAAAGGAACTCCCGTGTATAAGATATTTTTGAATG
JMFS064G08+           ACATATCTCCAATTCACTCAAGGACAAAAGGAACTCCCGTGTATAAGATATTTTTGAATG
rJMSF030P23-          ACATATCTCCAATTCACTCAAGGACAAAAGGAACTCCCGTGTATAAGATATTTTTGAATG
rJMSF016C16-          ACATATCTCCAATTCACTCAAGGACAAAAGGAACTCCCGTGTATAAGATATTTTTGAATG
                      ____________________________________________________________
consensus             ACATATCTCCAATTCACTCAAGGACAAAAGGAACTCCCGTGTATAAGATATTTTTGAATG
 
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JMFF012I05+           CTTCTGGCTATGTATACTGGAGGATTCTTCTGGGAGACTTGGATCTTCATTATCTAAGCT
JMFS064G08+           CTTCTGGCTATGTATACTGGAGGATTCTTCTGGGAGACTTGGATCTTCATTATCTAAGCT
rJMSF030P23-          CTTCTGGCTATGTATACTGGAGGATTCTTCTGGGAGACTTGGATCTTCATTATCTAAGCT
rJMSF016C16-          CTTCTGGCTATGTATACTGGAGGATTCTTCTGGGAGACTTGGATCTTCATTATCTAAGCT
                      ____________________________________________________________
consensus             CTTCTGGCTATGTATACTGGAGGATTCTTCTGGGAGACTTGGATCTTCATTATCTAAGCT
 
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JMFF012I05+           CATTCTGAGAGATTTGAGATTACTTTCCAGAACCAGCTAATACAAG              
JMFS064G08+           CATTCTGAGAGATTTGAGATTACTTTCCAGAACCAGCTAATACAAGCAGACCCCTGAACT
rJMSF030P23-          CATTCTGAGAGATTTGAGATTACTTTCCAGAACCAGCTAATACAAGCAGACCCCTGAACT
rJMSF016C16-          CATTCTGAGAGATTTGAGATTACTTTCCAGAACCAGCTAATACAAGCAGACCCCTGAACT
                      ____________________________________________________________
consensus             CATTCTGAGAGATTTGAGATTACTTTCCAGAACCAGCTAATACAAGCAGACCCCTGAACT
 
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JMFS064G08+           GATAATTGTCCACCACTACCAACAATCTATCTACTCGTATTCATTACCAAAAAACATCAT
rJMSF030P23-          GATAATTGTCCACCACTACCAACAATCTATCTACTCGTATTCATTACCAAAAAACATCAT
rJMSF016C16-          GATAATTGTCCACCACTACCAACAATCTATCTACTCGTATTCATTACCAAAAAACATCAT
                      ____________________________________________________________
consensus             GATAATTGTCCACCACTACCAACAATCTATCTACTCGTATTCATTACCAAAAAACATCAT
 
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JMFS064G08+           CTCTTAGTCATAGCAA                                            
rJMSF030P23-          CTCTTAGTCATAGCAAGCAATATTATCCCGGAAATCCCTAATTAACCCCTGGAGATACAA
rJMSF016C16-          CTCTTAGTCATAGCAAGCAATATTATCCCGGAAATCCCTAATTAACCCCTGGAGATACAA
                      ____________________________________________________________
consensus             CTCTTAGTCATAGCAAGCAATATTATCCCGGAAATCCCTAATTAACCCCTGGAGATACAA
 
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rJMSF030P23-          ATAAACAATATTTTCACGGAATCGTACCCAAAGGCAATTATGTAACGTCAAATTCCAGTC
rJMSF016C16-          ATAAACAATATTTTCACGGAATCGTACCCAAAGGCAATTATGTAACGTCAAATTCCAGTC
JMFS124B11+                                                      AACGTCAAATTCCAGTC
JMFS079G06+                             GAATCGTACCCAAAGGCAATTATGTAACGTCAAATTCCAGTC
                      ____________________________________________________________
consensus             ATAAACAATATTTTCACGGAATCGTACCCAAAGGCAATTATGTAACGTCAAATTCCAGTC
 
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rJMSF030P23-          ACCGGCTCGTTAGTTCATACTACGACCGCCATTGAAAACAACAGAATACGAATGATATAA
rJMSF016C16-          ACCGGCTCGTTAGTTCATACTACGACCGCCATTGAAAACAACAGAATACGAATGATATAA
JMFS124B11+           ACCGGCTCGTTAGTTCATACTACGACCGCCATTGAAAACAACAGAATACGAATGATATAA
JMFS079G06+           ACCGGCTCGTTAGTTCATACTACGACCGCCATTGAAAACAACAGAATACGAATGATATAA
                      ____________________________________________________________
consensus             ACCGGCTCGTTAGTTCATACTACGACCGCCATTGAAAACAACAGAATACGAATGATATAA
 
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rJMSF030P23-          TAGCGCAAAAGCAATAGCAAAGCTACAGATTTCGAATAAACCTAATCCACTTGATCGAGC
rJMSF016C16-          TAGCGCAAAAGCAATAGCAAAGCTACAGATTTCGAATAAACCTAATCCACTTGATCGAGC
JMFS124B11+           TAGCGCAAAAGCAATAGCAAAGCTACAGATTTCGAATAAACCTAATCCACTTGATCGAGC
JMFS019G09+                          AGCAAAGGTACAGGTTTGGAATAAACGTAATCCCCTTGATCGAGC
JMFS079G06+           TAGCGCAAAAGCAATAGCAAAGCTACAGATTTCGAATAAACCTAATCCACTTGATCGAGC
JMSF030P23+                                                        TCCACTTGATCGAGC
                      ____________________________________________________________
consensus             TAGCGCAAAAGCAATAGCAAAGCTACAGATTTCGAATAAACCTAATCCACTTGATCGAGC
 
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rJMSF030P23-          TCAATCTACAAGGAAATCGCGAAAACCATA-CCAATACTCAATCAATCCTAGCTC     
rJMSF016C16-          TCAATCTACAAGGAAATCGCGAAAACCATA-CCAATACTCAATCAATCCTAGCTCCACTC
JMFS124B11+           TCAATCTACAAGGAAATCGCGAAAACCATA-CCAATACTCAATCAATCCTAGCTCCACTC
JMFS019G09+           TCAATCTACAAGGAAATCGCGAAAACCATA-CCAATACTCAATCAATCCTAGCTCCACTC
JMFS079G06+           TCAATCTACAAGGAAATCGCGAAAACCATA-CCAATACTCAATCAATCCTAGCTCCACTC
JMSF030P23+           TCAATCTACAAGGAAATCGCGAAAACCATACCCAATACTCAATCAATCCTAGCTCCACTC
                      ____________________________________________________________
consensus             TCAATCTACAAGGAAATCGCGAAAACCATA-CCAATACTCAATCAATCCTAGCTCCACTC
 
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rJMSF016C16-          CATAAAAAATATCATTCACAACGACATTCATCGAAATCCGACCTCAAACATACGCATCCT
JMFS124B11+           CATAAAAAATATCATTCACAACGACATTCATCGAAATCCGACCTCAAACATACGCATCCT
JMFS019G09+           CATAAAAAATATCATTCACAACGACATTCATCGAAATCCGACCTCAAACATACGCATCCT
JMFS079G06+           CATAAAAAATATCATTCACAACGACATTCATCGAAATCCGACCTCAAACATACGCATCCT
JMSF030P23+           CATAAAAAATATCATTCACAACGACATTCATCGAAATCCGACCTCAAACATACGCATCCT
                      ____________________________________________________________
consensus             CATAAAAAATATCATTCACAACGACATTCATCGAAATCCGACCTCAAACATACGCATCCT
 
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rJMSF016C16-          TACGATGATCTCGAATTCAACAATAACGTTTACG                          
JMFS124B11+           TACGATGATCTCGAATTCAACAATAACGTTTACGAAATCTGAAACCACAAACTCAACCTT
JMFS019G09+           TACGATGATCTCGAATTCAGCAATAACGTTTACGAAATCTGAAACCACAAACTCAACCTT
JMFS079G06+           TACGATGATCTCGAATTCAACAATAACGTTTACGAAATCTGAAACCACAAACTCAACCTT
JMSF030P23+           TACGATGATCTCGAATTCAACAATAACGTTTACGAAATCTGAAACCACAAACTCAACCTT
JMSF016C16+                              ACAATAACGTTTACGAAATCTGAAACCACAAACTCAACCTT
                      ____________________________________________________________
consensus             TACGATGATCTCGAATTCAACAATAACGTTTACGAAATCTGAAACCACAAACTCAACCTT
 
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JMFS124B11+           CAACAACACCCGTGCAAGAGGAAATTCGTAGGTTTTCTTTCCTATTTCTCTCGTAATCTG
JMFS019G09+           CAACAACACCCGTGCAAGAGGAAATTCGTAGGTTTTCTTTCCTATTTCTCTCGTAATCTG
JMFS079G06+           CAACAACACCCGTGCAAGAGGAAATTCGTAGGTTTTCTTTCCTATTTCTCTCGTAATCTG
JMSF030P23+           CAACAACACCCGTGCAAGAGGAAATTCGTAGGTTTTCTTTCCTATTTCTCTCGTAATCTG
JMSF016C16+           CAACAACACCCGTGCAAGAGGAAATTCGTAGGTTTTCTTTCCTATTTCTCTCGTAATCTG
                      ____________________________________________________________
consensus             CAACAACACCCGTGCAAGAGGAAATTCGTAGGTTTTCTTTCCTATTTCTCTCGTAATCTG
 
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JMFS124B11+           ATCTTAACGATTTCAACGCTAGGGTTTACTTTTCTATCTGGATCAAGATACAGAAAAGAG
JMFS019G09+           ATCTTAACGATTTCAACGCTAGGGTTTACTTTTCTATCTGGATCAACATACAGAAAAGAG
JMFS079G06+           ATCTTAACGATTTCAACGCTAGGGTTTACTTTTCTATCTGGATCAAGATACAGAAAAGAG
JMSF030P23+           ATCTTAACGATTTCAACGCTAGGGTTTACTTTTCTATCTGGATCAAGATACAGAAAAGAG
JMSF016C16+           ATCTTAACGATTTCAACGCTAGGGTTTACTTTTCTATCTGGATCAAGATACAGAAAAGAG
                      ____________________________________________________________
consensus             ATCTTAACGATTTCAACGCTAGGGTTTACTTTTCTATCTGGATCAAGATACAGAAAAGAG
 
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JMFS124B11+           AGAGAGTTAGGGCTTCGATGTTCGCAAATTTCCCCACTTCTCCAACTGAATCGCAAGACC
JMFS019G09+           AGAGAGTTAGGGCTTCGATGTTCGCAAATTTCCCCACTTCTCCAACTGAATCGCAAGACC
JMFS079G06+           AGAGAGTTAGGGCTTCGATGTTCGCAAATTTCCCCACTTCTCCAACTGAATCGCAAGACC
JMSF030P23+           AGAGAGTTAGGGCTTCGATGTTCGCAAATTTCCCCACTTCTCCAACTGAATCGCAAGACC
JMSF016C16+           AGAGAGTTAGGGCTTCGATGTTCGCAAATTTCCCCACTTCTCCAACTGAATCGCAAGACC
                      ____________________________________________________________
consensus             AGAGAGTTAGGGCTTCGATGTTCGCAAATTTCCCCACTTCTCCAACTGAATCGCAAGACC
 
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JMFS124B11+           TGAGAGAACAATACAGAGACATATATGGACGTGTATATATATATTATATATAGAGAGAGA
JMFS019G09+           TGAGAGAGCAATACAGAGACATATATGGACGTGTATATATATATTATATATAGAGAGAGA
JMFS079G06+           TGAGAGAACAATACAGAGACATATATGGACGTGTATATATATATTATATATAGAGAGAGA
JMSF030P23+           TGAGAGAACAATACAGAGACATATATGGACGTGTATATATATATTATATATAGAGAGAGA
JMSF016C16+           TGAGAGAACAATACAGAGACATATATGGACGTGTATATATATATTATATATAGAGAGAGA
                      ____________________________________________________________
consensus             TGAGAGAACAATACAGAGACATATATGGACGTGTATATATATATTATATATAGAGAGAGA
 
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JMFS124B11+           GAGAACGAAAGAGAGAAAGA                                        
JMFS019G09+           GAGAACGAAAGAGAGAAAGAGAGGTTCGGTTCC                           
JMFS079G06+           GAGAACGAAAGAGAGAAAGAGAGGTTCGGTTCCGCGGCGGAGGGGA              
JMSF030P23+           GAGAACGAAAGAGAGAAAGAGAGGTTCGGTTCCGCGGCGGAGGGGAGGGGTCCGGAGTCT
JMSF016C16+           GAGAACGAAAGAGAGAAAGAGAGGTTCGGTTCCGCGGCGGAGGGGAGGGGTCCGGAGTCT
                      ____________________________________________________________
consensus             GAGAACGAAAGAGAGAAAGAGAGGTTCGGTTCCGCGGCGGAGGGGAGGGGTCCGGAGTCT
 
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JMSF030P23+           GTAAGGGGTGATTGAGGAGGAAAGCCAAAGAAATGACGTTGGCTACGCTGCACGGCCGGG
JMSF016C16+           GTAAGGGGTGATTGAGGAGGAAAGCCAAAGAAATGACGTTGGCTACGCTGCACGGCCGGG
                      ____________________________________________________________
consensus             GTAAGGGGTGATTGAGGAGGAAAGCCAAAGAAATGACGTTGGCTACGCTGCACGGCCGGG
 
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JMSF030P23+           AAAACTATACTCCGCAATCAATTCACGCGCTGTCTCCATTGCGTGATTCTTGGGC     
JMSF016C16+           AAAACTATACTCCGCAATCAATTCACGCGCTGTCTCCATTGCGTGATTCTTGGGCCCTCC
                      ____________________________________________________________
consensus             AAAACTATACTCCGCAATCAATTCACGCGCTGTCTCCATTGCGTGATTCTTGGGCCCTCC