Contig 002172:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A05Sequence544002172 (9)ref|XP_011078818.1|2e-17PREDICTED: protein trichome birefringence-like [Sesamum indicum]193001036 (8)
JMFF006A15Sequence543002172 (9)ref|XP_011078818.1|8e-16PREDICTED: protein trichome birefringence-like [Sesamum indicum]802001036 (8)ref|XP_006362212.1|419PREDICTED: uncharacterized protein LOC102599885 [Solanum tuberosum]
JMFF046J10Sequence504002172 (9)ref|XP_011078818.1|7e-16PREDICTED: protein trichome birefringence-like [Sesamum indicum]332001036 (8)
JMFF046J12Sequence482002172 (9)ref|XP_011078818.1|4e-17PREDICTED: protein trichome birefringence-like [Sesamum indicum]
JMSF006J13Sequence448002172 (9)ref|XP_011078818.1|1e-17PREDICTED: protein trichome birefringence-like [Sesamum indicum]345001036 (8)
JMSF011E19Sequence455002172 (9)ref|XP_011078818.1|2e-17PREDICTED: protein trichome birefringence-like [Sesamum indicum]353001036 (8)
JMSF015M23Sequence241002172 (9)354001036 (8)
JMSF028H14Sequence456002172 (9)ref|XP_011078818.1|2e-17PREDICTED: protein trichome birefringence-like [Sesamum indicum]120020418
JMSF031J20Sequence606002172 (9)ref|XP_011078818.1|2e-16PREDICTED: protein trichome birefringence-like [Sesamum indicum]286001036 (8)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF006A05+ C
                      ____________________________________________________________
consensus C
 
. : . : . : . : . : . :
JMFF006A05+ TGATTATGCAACCCAGAAGAAGACTCCGATGCAGCTGTTGTGTTCCGATTCGACGGCTTC
JMSF031J20+ CGACGGCTTC
                      ____________________________________________________________
consensus TGATTATGCAACCCAGAAGAAGACTCCGATGCAGCTGTTGTGTTCCGATTCGACGGCTTC
 
. : . : . : . : . : . :
JMFF006A05+ AAGATTTCAGCTTTATGATTAGCCTGAGACTGATTTTTCGGGACTTCCGGGTCTTTACTC
JMSF031J20+ AAGATTTCAGCTTTATGATTAGCCTGAGACTGATTTTTCGGGACTTCCGGGTCTTTACTC
                      ____________________________________________________________
consensus AAGATTTCAGCTTTATGATTAGCCTGAGACTGATTTTTCGGGACTTCCGGGTCTTTACTC
 
. : . : . : . : . : . :
JMFF006A05+ AAACTGGGCATTTCGGAGGAACTGTTACTCCGAGATGCCGGGGAAGCAGTAAAGCTGTGG
JMFF046J12+ AGCTGTGG
JMFF046J10+ GGGAAGCAGTAAAGCTGTGG
JMSF031J20+ AAACTGGGCATTTCGGAGGAACTGTTACTCCGAGATGCCGGGGAAGCAGTAAAGCTGTGG
                      ____________________________________________________________
consensus AAACTGGGCATTTCGGAGGAACTGTTACTCCGAGATGCCGGGGAAGCAGTAAAGCTGTGG
 
. : . : . : . : . : . :
JMFF006A05+ GCTTGCTGGGAAGAATTGCGGAAAAAGTAGGAAAAAATCGAAGAGAAATGAGATCCAGAA
JMFF046J12+ GCTTGCTGGGAAGAA-TGGGGAAAAAGTAGGAAAAAATCGAAGAGAAATGAGATCCAGAA
JMFF046J10+ GCTTGCTGGGAAGAATTGGGGAAAAAGTAGGAAAAAATCGAAGAGAAATGAGATCCAGAA
JMSF031J20+ GCTTGCTGGGAAGAATTGGGGAAAAAGTAGGAAAAAATCGAAGAGAAATGAGATCCAGAA
JMSF011E19+ AAAAAGTAGGAAAAANTCGAAGAGAAATGAGATCCAGAA
JMSF006J13+ AAAAATCGAAGAGAAATGAGATCCAGAA
                      ____________________________________________________________
consensus GCTTGCTGGGAAGAATTGGGGAAAAAGTAGGAAAAAATCGAAGAGAAATGAGATCCAGAA
 
. : . : . : . : . : . :
JMFF006A05+ GAGTCATCGGATACACTCCCACCCACCACCATCACCGTCGCCGCCGCCGCTAGTTAAAGA
JMFF046J12+ GAGTCATCGGATACACT-CCCACCACCACCATCACCGTCGCCGCCGCCGCTAGTTAAAGA
JMFF046J10+ GAGTCATCGGATACACT-CCCACCACCACCATCACCGTCGCCGCCGCCGCTAGTTAAAGA
JMSF031J20+ GAGTCATCGGATACACT-CCCACCACCACCATCACCGTCGCCGCCGCCGCTAGTTAAAGA
JMSF011E19+ GAGTCATCGGATACACT-CCCACCACCACCATCACCGTCACCGCCGCCGCTAGTTAAAGA
JMFF006A15+ GCCGCCGCTAGTTAAAGA
JMSF028H14+ TACACT-CCCACCACCACCATCACCGTCGCCGCCGCCGCTAGTTAAAGA
JMSF006J13+ GAGTCATCGGATACACTCCCCACCACCACCATCACCGTCGCCGCCGCCGCTAGTTAAAGA
                      ____________________________________________________________
consensus GAGTCATCGGATACACT-CCCACCACCACCATCACCGTCGCCGCCGCCGCTAGTTAAAGA
 
. : . : . : . : . : . :
JMFF006A05+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
JMFF046J12+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
JMFF046J10+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
JMSF031J20+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
JMSF011E19+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
JMFF006A15+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
JMSF028H14+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
JMSF006J13+ AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
                      ____________________________________________________________
consensus AAATACATTTGTGAACCAAGGAGAAGAGGGGGCTGGCGAAGGACTAAAGGCCAAGAAAAT
 
. : . : . : . : . : . :
JMFF006A05+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMFF046J12+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMFF046J10+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMSF031J20+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMSF011E19+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMFF006A15+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMSF028H14+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMSF006J13+ GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
JMSF015M23+ T
                      ____________________________________________________________
consensus GGTGAAAGCAATGAAAACAAAGACACAGGCGTAGACACAAACCTTGGTTCTCTGGGTTTT
 
. : . : . : . : . : . :
JMFF006A05+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
JMFF046J12+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
JMFF046J10+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCC
JMSF031J20+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
JMSF011E19+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
JMFF006A15+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
JMSF028H14+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
JMSF006J13+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
JMSF015M23+ GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
                      ____________________________________________________________
consensus GATAAAAGAGAAATGGGGTTTCAGTTCTGAAAGTAAATTTCCGCCATTGATGGGAGCATA
 
. : . : . : . : . : . :
JMFF006A05+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGT
JMFF046J12+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
JMSF031J20+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
JMSF011E19+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
JMFF006A15+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
JMSF028H14+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
JMSF006J13+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
JMSF015M23+ CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
                      ____________________________________________________________
consensus CTTTGCAGCATCAGCCATCTGGGGAAGGCGGTGGTCTGGAAACCCAAGAAGAGTTATGGA
 
. : . : . : . : . : . :
JMFF046J12+ TTGGGTGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
JMSF031J20+ TTGGGCGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
JMSF011E19+ TTGGGTGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
JMFF006A15+ TTGGGTGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
JMSF028H14+ TTGGGTGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
JMSF006J13+ TTGGGTGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
JMSF015M23+ TTGGGTGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
                      ____________________________________________________________
consensus TTGGGTGAGAGAGAGAAGCGGAGGCGTATTTGTACGGTGTAAACTTTACGCAGAAACACG
 
. : . : . : . : . : . :
JMFF046J12+ GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCAT
JMSF031J20+ GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCATTGTAGCAACG
JMSF011E19+ GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCATTGTAGCAACGAT
JMFF006A15+ GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCATTGTAGCAACGAT
JMSF028H14+ GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCATTGTAGCAACGAT
JMSF006J13+ GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCATTGTAGCAACGAT
JMSF015M23+ GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCATTGTAGCAACGATGCCC
                      ____________________________________________________________
consensus GCGGAGAGAGAATTGTACCGGAAGACAAAAAGTTACAGCGCCATTGTAGCAACGATGCCC