Contig 002160:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043N07+                                                               CACAATAA
                      ____________________________________________________________
consensus                                                                 CACAATAA
 
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JMSF043N07+           ATGACATATAGTACTAACTACTAAAATCACATTCACAGTGATAAATCACAATACTCTGTC
                      ____________________________________________________________
consensus             ATGACATATAGTACTAACTACTAAAATCACATTCACAGTGATAAATCACAATACTCTGTC
 
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JMSF043N07+           TTCACAAACATACACTAAAATACTAAATAAAAGTCATAGCCACATGCCTATTGCCCATAC
                      ____________________________________________________________
consensus             TTCACAAACATACACTAAAATACTAAATAAAAGTCATAGCCACATGCCTATTGCCCATAC
 
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JMSF043N07+           TGCCATAGCCAAATTGCCAAATTGTCAATCTTACCATAGTTCATTAGGAAAAAAAATAAA
                      ____________________________________________________________
consensus             TGCCATAGCCAAATTGCCAAATTGTCAATCTTACCATAGTTCATTAGGAAAAAAAATAAA
 
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JMSF043N07+           CATGCTTCCACAGTTCCACATACTGCTAATCTGCCGCACCACTAAATAAACATACTGCCA
JMSF014L02+                                                         TAAACATACTGCCA
                      ____________________________________________________________
consensus             CATGCTTCCACAGTTCCACATACTGCTAATCTGCCGCACCACTAAATAAACATACTGCCA
 
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JMSF043N07+           ATCTGCCACTAAATAAAAATCTTCCAATCTGTGTGAATTTTTTTTTATATGAATCAAACT
JMSF014L02+           ATCTGCCACTAAATAAAAATCTTCCAATCTGTGTGAATTTTTTTTTATATGAATCAAACT
                      ____________________________________________________________
consensus             ATCTGCCACTAAATAAAAATCTTCCAATCTGTGTGAATTTTTTTTTATATGAATCAAACT
 
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JMSF043N07+           ATCAAAGTGAACAAATTACAATTTACAGATACTCAAATAGAAATTATAAAATTAATATTA
JMSF014L02+           ATCAAAGTGAACAAATTACAATTTACAGATACTCAAATAGAAATTATAAAATTAATATTA
                      ____________________________________________________________
consensus             ATCAAAGTGAACAAATTACAATTTACAGATACTCAAATAGAAATTATAAAATTAATATTA
 
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JMSF043N07+           GTAACTTACCCTTAAGAGTTGGAACTTGGAAGAAGTGAAGAACCCAAAATCGGAACAAGT
JMSF014L02+           GTAACTTACCCTTAAGAGTTGGAACTTGGAAGAAGTGAAGAACCCAAAATCGGAACAAGT
                      ____________________________________________________________
consensus             GTAACTTACCCTTAAGAGTTGGAACTTGGAAGAAGTGAAGAACCCAAAATCGGAACAAGT
 
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JMSF043N07+           CTGAGGACTGAGATGGGTGAGGGCGTGAGGCGGTGAGCGGCGAGCCGGCAACTGGGGGGC
JMSF014L02+           CTGAGGACTGAGATGGGTGAGGGCGTGAGGCGGTGAGCGGCGAGCCGGCAACTGGGGGGC
                      ____________________________________________________________
consensus             CTGAGGACTGAGATGGGTGAGGGCGTGAGGCGGTGAGCGGCGAGCCGGCAACTGGGGGGC
 
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JMSF043N07+           GTGAGTGAAAGCTGCGCGATTTAGGGTTCGATTGTTCGAGAGGGGTAGTGAGGGTTGAGC
JMSF014L02+           GTGAGTGAAAGCTGCGCGATTTAGGGTTCGATTGTTCGAGAGGGGTAGTGAGGGTTGAGC
                      ____________________________________________________________
consensus             GTGAGTGAAAGCTGCGCGATTTAGGGTTCGATTGTTCGAGAGGGGTAGTGAGGGTTGAGC
 
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JMSF043N07+           CGTGAGGCAGTCTAGGCGTCTAGCAGTGACTCGGTGTGCTATGATTCTATGAGGATTGAG
JMSF014L02+           CGTGAGGCAGTCTAGGCGTCTAGCAGTGACTCGGTGTGCTATGATTCTATGAGGATTGAG
                      ____________________________________________________________
consensus             CGTGAGGCAGTCTAGGCGTCTAGCAGTGACTCGGTGTGCTATGATTCTATGAGGATTGAG
 
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JMSF043N07+           GGTGTGAGAGTGAAAGCTTCGCGATTTAGGATTTTAGGGTTCGAGAGTGAGAACTGAGAG
JMSF014L02+           GGTGTGAGAGTGAAAGCTTCGCGATTTAGGATTTTAGGGTTCGAGAGTGAGAACTGAGAG
                      ____________________________________________________________
consensus             GGTGTGAGAGTGAAAGCTTCGCGATTTAGGATTTTAGGGTTCGAGAGTGAGAACTGAGAG
 
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JMSF043N07+           AGGGGCAGAGTTTTAGGGTTGCAAATAGAGGTTGTCT                       
JMSF014L02+           AGGGGCAGAGTTTTAGGGTTGCAAATAGAGGTTGTCTGCCAAACTTCTATTTTTCCCCTC
                      ____________________________________________________________
consensus             AGGGGCAGAGTTTTAGGGTTGCAAATAGAGGTTGTCTGCCAAACTTCTATTTTTCCCCTC