Contig 002157:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013I18Sequence511002157 (2)ref|XP_006340359.1|128PREDICTED: uncharacterized protein LOC102592173 [Solanum tuberosum]735012644 (2)gb|AAT40501.1|1e-63Tryptophan/tyrosine permease family protein [Solanum demissum]
JMSF027A20Sequence668002157 (2)ref|XP_004251243.1|1e-81PREDICTED: uncharacterized protein LOC101267772 isoform X1 [Solanum lycopersicu685012644 (2)gb|AAT40501.1|6e-43Tryptophan/tyrosine permease family protein [Solanum demissum]

Alignment

This contig is upended


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JMSF027A20+                                                                   AATG
                      ____________________________________________________________
consensus                                                                     AATG
 
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JMSF027A20+           GAATGCCAAGGAAGCTTGTTAATATATCTGAAGATCGAGCCACGTAAGCAACAAGAAGAG
                      ____________________________________________________________
consensus             GAATGCCAAGGAAGCTTGTTAATATATCTGAAGATCGAGCCACGTAAGCAACAAGAAGAG
 
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JMSF027A20+           CATAATGAATGAAAATGTATGACCAGCAAGCAATTTGAACTCCTGTATTACCAAGGGTTC
                      ____________________________________________________________
consensus             CATAATGAATGAAAATGTATGACCAGCAAGCAATTTGAACTCCTGTATTACCAAGGGTTC
 
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JMSF027A20+           TCCTGGCCATTGACACCAAGGACACACCACCAGAACCCAGCTCACACATAGTGTTCACAT
                      ____________________________________________________________
consensus             TCCTGGCCATTGACACCAAGGACACACCACCAGAACCCAGCTCACACATAGTGTTCACAT
 
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JMSF027A20+           TCACTTCAGCAATTAGTAGCCCAGTTATGACCATAAAAATCCAACAGCCAATGCAGGTCA
JMSF013I18+                                        ACCATAAAANTCCANCAGCCAATGCAGGTCA
                      ____________________________________________________________
consensus             TCACTTCAGCAATTAGTAGCCCAGTTATGACCATAAAAATCCAACAGCCAATGCAGGTCA
 
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JMSF027A20+           CTGCAGAGGCAAGAAACCCAGATTCTTGTGTCACTGCAGGAATTGCAAGTATCCCTGCAC
JMSF013I18+           CTGCAGAGGCAAGAAACCCAGATTCTTGTGTCACTGCAGGAATTGCAAGTATCCCTGCAC
                      ____________________________________________________________
consensus             CTGCAGAGGCAAGAAACCCAGATTCTTGTGTCACTGCAGGAATTGCAAGTATCCCTGCAC
 
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JMSF027A20+           CTATTGTGGTGCCAGCAACAAGAAAAATGGCACTGCTAAGGCTTCCTGGTTCTCTCTTCA
JMSF013I18+           CTATTGTGGTGCCAGCAACAAGAAAAATGGCACTGCTAAGGCTTCCTGGTTCTCTCTTCA
                      ____________________________________________________________
consensus             CTATTGTGGTGCCAGCAACAAGAAAAATGGCACTGCTAAGGCTTCCTGGTTCTCTCTTCA
 
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JMSF027A20+           AAGTAGCTTGATTGAGGTTAGAAAACAACCTCTCAAATTCATACACTTGTTCATCTTCCT
JMSF013I18+           AAGTAGCTTGATTGAGGTTAGAAAACAACCTCTCAAATTCATACACTTGTTCATCTTCCT
                      ____________________________________________________________
consensus             AAGTAGCTTGATTGAGGTTAGAAAACAACCTCTCAAATTCATACACTTGTTCATCTTCCT
 
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JMSF027A20+           GTTGTCCAGAGGATGCTGACGACGGTTTTCCAGATAATGACTTGAAAGCATCAAGACGGC
JMSF013I18+           GTTGTCCAGAGGATGCTGACGACGGTTTTCCAGATAATGACTTGAAAGCATCAAGACGGC
                      ____________________________________________________________
consensus             GTTGTCCAGAGGATGCTGACGACGGTTTTCCAGATAATGACTTGAAAGCATCAAGACGGC
 
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JMSF027A20+           GTCGTCCATCAGATGAAATCCAAGTTGGCAGCATTAAAGAATGGTTCTTGGAATTCCAAT
JMSF013I18+           GTCGTCCATCAGATGAAATCCAAGTTGGCAGCATTAAAGAATGGTTCTTGGAATTCCAAT
                      ____________________________________________________________
consensus             GTCGTCCATCAGATGAAATCCAAGTTGGCAGCATTAAAGAATGGTTCTTGGAATTCCAAT
 
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JMSF027A20+           TGGAAGTAAATTTATGAAATGGGTTTGCTGCATTGCTTCTGTGATTGTGAAGTGCAGCCT
JMSF013I18+           TGGAAGTAAATTTATGAAATGGGTTTGCTGCATTGCTTCTGTGATTGTGAAGTGCAGCCT
                      ____________________________________________________________
consensus             TGGAAGTAAATTTATGAAATGGGTTTGCTGCATTGCTTCTGTGATTGTGAAGTGCAGCCT
 
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JMSF027A20+           TGGGACGACAAAGGAATTTTGCAGAAGAGGATAAAGATGAGGCTGCCATTATCATACTGC
JMSF013I18+           TGGGACGACAAAGGAATTTTGCAGAAGAGGATAAAGATGAGGCTGCCATTATCATACTGC
                      ____________________________________________________________
consensus             TGGGACGACAAAGGAATTTTGCAGAAGAGGATAAAGATGAGGCTGCCATTATCATACTGC
 
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JMSF027A20+           TCT                                                         
JMSF013I18+           TCTGCTATGTTTCTTGCGTGTATTGGGTCTTCAATTCTTCTGGGTTGCGATGTCTGCTCC
                      ____________________________________________________________
consensus             TCTGCTATGTTTCTTGCGTGTATTGGGTCTTCAATTCTTCTGGGTTGCGATGTCTGCTCC