Contig 002152:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013C21Sequence232002152 (5)757002978 (4)gb|KJB41341.1|3e-132hypothetical protein B456_007G099700 [Gossypium raimondii]
JMSF029E14Sequence673002152 (5)emb|CDP08805.1|1e-79unnamed protein product [Coffea canephora]747023558ref|XP_002274726.1|2e-32PREDICTED: signal peptide peptidase-like 4 [Vitis vinifera] emb|CBI40384.3| unna
JMSF034J19Sequence597002152 (5)emb|CDP08805.1|8e-74unnamed protein product [Coffea canephora]734002978 (4)gb|KJB41341.1|9e-113hypothetical protein B456_007G099700 [Gossypium raimondii]
JMSF045F20Sequence811002152 (5)ref|XP_009784968.1|2e-125PREDICTED: signal peptide peptidase-like 4 [Nicotiana sylvestris]776002978 (4)gb|KJB41341.1|2e-116hypothetical protein B456_007G099700 [Gossypium raimondii]
JMSF050N24Sequence222002152 (5)665002978 (4)gb|KJB41341.1|2e-86hypothetical protein B456_007G099700 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045F20+ CTAGACTGTGTAGCCTCCATGCCACAGTATTCATCCGAGCCATCTTT
                      ____________________________________________________________
consensus CTAGACTGTGTAGCCTCCATGCCACAGTATTCATCCGAGCCATCTTT
 
. : . : . : . : . : . :
JMSF045F20+ CAACAGCTTATCCTGCTGAATTGCAGCTTCTCTGGCAGTCCATGCAGACCAGTACGATGC
                      ____________________________________________________________
consensus CAACAGCTTATCCTGCTGAATTGCAGCTTCTCTGGCAGTCCATGCAGACCAGTACGATGC
 
. : . : . : . : . : . :
JMSF045F20+ ACATAAAATGGTAGCAACAGCCATAAGCCACAGAAATACTTCAGCTACATCAACCACAGG
                      ____________________________________________________________
consensus ACATAAAATGGTAGCAACAGCCATAAGCCACAGAAATACTTCAGCTACATCAACCACAGG
 
. : . : . : . : . : . :
JMSF029E14+ TTTTCTATCAT
JMSF045F20+ GCGCCTTGGAGAATACAGCTGCACAGAAACCATTGACTTGTTCATTATATTTTCTATCAA
                      ____________________________________________________________
consensus GCGCCTTGGAGAATACAGCTGCACAGAAACCATTGACTTGTTCATTATATTTTCTATCAT
 
. : . : . : . : . : . :
JMSF029E14+ GCTTTGACCAGCATCTTGTGGGAGCATAATCGCAGGTATGCCAATATCCAGATCAGTTTC
JMSF045F20+ GCTTAGACCAGCATCTTGTGGGAGCATGATAGCAGGTATGCCAATAACCAAATCAGTCTC
                      ____________________________________________________________
consensus GCTTTGACCAGCATCTTGTGGGAGCATGATCGCAGGTATGCCAATATCCAGATCAGTTTC
 
. : . : . : . : . : . :
JMSF034J19+ CAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
JMSF029E14+ GTTTTTTTCACAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
JMSF045F20+ ATTTCCTTCGCAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
                      ____________________________________________________________
consensus GTTTTTTTCGCAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
 
. : . : . : . : . : . :
JMSF034J19+ AGCACCGGCATCATCTGCAACATTTGCTTTGGTAGTGAAACTGCAATTGCCACGATGTAC
JMSF029E14+ AGCACCAGCAGCTTCAGCAACATTTGCTTTGGTAGTGAAGCTGCAATTGCCCCGATGCAC
JMSF045F20+ AGCACCGGCATCATCTGCAACATTTGCTTTGGTAGTGAAACTGCAATTGCCACGATGTAC
                      ____________________________________________________________
consensus AGCACCGGCATCATCTGCAACATTTGCTTTGGTAGTGAAACTGCAATTGCCACGATGTAC
 
. : . : . : . : . : . :
JMSF034J19+ TAATATGGCCTCACCAGTAAGCTTATTCCTCGGTTTGCTACAACAATCAGGTGGGTCAGC
JMSF029E14+ CAATATTGCCTCACCAGTGAGCTTATTCCTTGGTACACTACAACAATCAGGAGGGTCAGC
JMSF045F20+ TAATATGGCCTCACCAGTAAGCTTATTCCTCGGTTTGCTACAACAATCAGGTGGGTCAGC
                      ____________________________________________________________
consensus TAATATGGCCTCACCAGTAAGCTTATTCCTCGGTTTGCTACAACAATCAGGTGGGTCAGC
 
. : . : . : . : . : . :
JMSF034J19+ AAGAGCAAGTCTTGTTTGATTTGCTCGCTTCTCCTTCGACTCCAAGGTGGGGCCGAATCT
JMSF029E14+ AAGTGCGAGCCTTATTTGATTGGCACGCTTCTCCTTCGACTCCAAGGTGAGGCCAAATCG
JMSF045F20+ AAGAGCAAGTCTTGTTTGATTTGCTCGCTTCTCCTTCGACTCCAAGGTGGGGCCGAATCT
                      ____________________________________________________________
consensus AAGAGCAAGTCTTGTTTGATTTGCTCGCTTCTCCTTCGACTCCAAGGTGGGGCCGAATCT
 
. : . : . : . : . : . :
JMSF034J19+ CGCACCAACTCCAACAAATTCCATTTCTTCTTTACCATTGATCCAGGTTGCAACTTTTAC
JMSF029E14+ AGCACCAATCCCAACAAATTCCATTTCTTCCTTACCATTAATCCAGGTCGCGACTTCTAC
JMSF045F20+ CGCACCAACTCCAACAAATTCCATTTCTTCTTTACCATTGATCCAGGTTGCAACTTTTAC
                      ____________________________________________________________
consensus CGCACCAACTCCAACAAATTCCATTTCTTCTTTACCATTGATCCAGGTTGCAACTTTTAC
 
. : . : . : . : . : . :
JMSF034J19+ CAGAACAAAATTGTTATCACAACCAGCTCTCCTTGGAGCCACATCATCATGGTGAACTAT
JMSF029E14+ CAGAACAAAGTTGTTATCACAACCAGGTCTCCTTGGAGTCTTATCATCATGGTGAACAAT
JMSF045F20+ CAGAACAAAATTGTTATCACAACCAGCTCTCCTTGGAGCCACATCATCATGGTGAACTAT
JMSF050N24+ GCCACATCATCATGGTGAACTAT
                      ____________________________________________________________
consensus CAGAACAAAATTGTTATCACAACCAGCTCTCCTTGGAGCCACATCATCATGGTGAACTAT
 
. : . : . : . : . : . :
JMSF034J19+ ATCACCGCCATGAACCA
JMSF029E14+ ATCGCCACCTTGAACCA
JMSF045F20+ ATCACCGCCATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
JMSF050N24+ ATCACCGCCATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
JMSF013C21+ CATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
                      ____________________________________________________________
consensus ATCACCGCCATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
 
. : . : . : . : . : . :
JMSF045F20+ AGAACAGTACGGAGCCGTACTTCTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
JMSF050N24+ AGAACAGTACGGAGCCGTACTTNTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
JMSF013C21+ AGAACAGTACGGAGCCGTACTTCTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
                      ____________________________________________________________
consensus AGAACAGTACGGAGCCGTACTTCTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
 
. : . : . : . : . : . :
JMSF045F20+ CCTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTT
JMSF050N24+ CNTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTTCTTCCTNGTTTATTTTTT
JMSF013C21+ CCTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTTCTTCCTTGTTTATTTTTT
                      ____________________________________________________________
consensus CCTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTTCTTCCTTGTTTATTTTTT
 
. : . : . : . : . : . :
JMSF050N24+ TTTNTATTATTATNTATTT
JMSF013C21+ TTTCTATTATTATTTATTTTTTGTTTGGGTGCGACATGTGAAGAGACAGTCAAAAGCACC
                      ____________________________________________________________
consensus TTTCTATTATTATTTATTTTTTGTTTGGGTGCGACATGTGAAGAGACAGTCAAAAGCACC