Contig 002152:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013C21Sequence232002152 (5)757002978 (4)gb|KJB41341.1|3e-132hypothetical protein B456_007G099700 [Gossypium raimondii]
JMSF029E14Sequence673002152 (5)emb|CDP08805.1|1e-79unnamed protein product [Coffea canephora]747023558ref|XP_002274726.1|2e-32PREDICTED: signal peptide peptidase-like 4 [Vitis vinifera] emb|CBI40384.3| unna
JMSF034J19Sequence597002152 (5)emb|CDP08805.1|8e-74unnamed protein product [Coffea canephora]734002978 (4)gb|KJB41341.1|9e-113hypothetical protein B456_007G099700 [Gossypium raimondii]
JMSF045F20Sequence811002152 (5)ref|XP_009784968.1|2e-125PREDICTED: signal peptide peptidase-like 4 [Nicotiana sylvestris]776002978 (4)gb|KJB41341.1|2e-116hypothetical protein B456_007G099700 [Gossypium raimondii]
JMSF050N24Sequence222002152 (5)665002978 (4)gb|KJB41341.1|2e-86hypothetical protein B456_007G099700 [Gossypium raimondii]

Alignment

This contig is upended


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JMSF045F20+                        CTAGACTGTGTAGCCTCCATGCCACAGTATTCATCCGAGCCATCTTT
                      ____________________________________________________________
consensus                          CTAGACTGTGTAGCCTCCATGCCACAGTATTCATCCGAGCCATCTTT
 
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JMSF045F20+           CAACAGCTTATCCTGCTGAATTGCAGCTTCTCTGGCAGTCCATGCAGACCAGTACGATGC
                      ____________________________________________________________
consensus             CAACAGCTTATCCTGCTGAATTGCAGCTTCTCTGGCAGTCCATGCAGACCAGTACGATGC
 
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JMSF045F20+           ACATAAAATGGTAGCAACAGCCATAAGCCACAGAAATACTTCAGCTACATCAACCACAGG
                      ____________________________________________________________
consensus             ACATAAAATGGTAGCAACAGCCATAAGCCACAGAAATACTTCAGCTACATCAACCACAGG
 
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JMSF029E14+                                                            TTTTCTATCAT
JMSF045F20+           GCGCCTTGGAGAATACAGCTGCACAGAAACCATTGACTTGTTCATTATATTTTCTATCAA
                      ____________________________________________________________
consensus             GCGCCTTGGAGAATACAGCTGCACAGAAACCATTGACTTGTTCATTATATTTTCTATCAT
 
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JMSF029E14+           GCTTTGACCAGCATCTTGTGGGAGCATAATCGCAGGTATGCCAATATCCAGATCAGTTTC
JMSF045F20+           GCTTAGACCAGCATCTTGTGGGAGCATGATAGCAGGTATGCCAATAACCAAATCAGTCTC
                      ____________________________________________________________
consensus             GCTTTGACCAGCATCTTGTGGGAGCATGATCGCAGGTATGCCAATATCCAGATCAGTTTC
 
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JMSF034J19+                     CAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
JMSF029E14+           GTTTTTTTCACAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
JMSF045F20+           ATTTCCTTCGCAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
                      ____________________________________________________________
consensus             GTTTTTTTCGCAAACCATCTTGAAGAGCTCTGTTTGGTTGTTTATAATGAGGATAGCTGA
 
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JMSF034J19+           AGCACCGGCATCATCTGCAACATTTGCTTTGGTAGTGAAACTGCAATTGCCACGATGTAC
JMSF029E14+           AGCACCAGCAGCTTCAGCAACATTTGCTTTGGTAGTGAAGCTGCAATTGCCCCGATGCAC
JMSF045F20+           AGCACCGGCATCATCTGCAACATTTGCTTTGGTAGTGAAACTGCAATTGCCACGATGTAC
                      ____________________________________________________________
consensus             AGCACCGGCATCATCTGCAACATTTGCTTTGGTAGTGAAACTGCAATTGCCACGATGTAC
 
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JMSF034J19+           TAATATGGCCTCACCAGTAAGCTTATTCCTCGGTTTGCTACAACAATCAGGTGGGTCAGC
JMSF029E14+           CAATATTGCCTCACCAGTGAGCTTATTCCTTGGTACACTACAACAATCAGGAGGGTCAGC
JMSF045F20+           TAATATGGCCTCACCAGTAAGCTTATTCCTCGGTTTGCTACAACAATCAGGTGGGTCAGC
                      ____________________________________________________________
consensus             TAATATGGCCTCACCAGTAAGCTTATTCCTCGGTTTGCTACAACAATCAGGTGGGTCAGC
 
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JMSF034J19+           AAGAGCAAGTCTTGTTTGATTTGCTCGCTTCTCCTTCGACTCCAAGGTGGGGCCGAATCT
JMSF029E14+           AAGTGCGAGCCTTATTTGATTGGCACGCTTCTCCTTCGACTCCAAGGTGAGGCCAAATCG
JMSF045F20+           AAGAGCAAGTCTTGTTTGATTTGCTCGCTTCTCCTTCGACTCCAAGGTGGGGCCGAATCT
                      ____________________________________________________________
consensus             AAGAGCAAGTCTTGTTTGATTTGCTCGCTTCTCCTTCGACTCCAAGGTGGGGCCGAATCT
 
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JMSF034J19+           CGCACCAACTCCAACAAATTCCATTTCTTCTTTACCATTGATCCAGGTTGCAACTTTTAC
JMSF029E14+           AGCACCAATCCCAACAAATTCCATTTCTTCCTTACCATTAATCCAGGTCGCGACTTCTAC
JMSF045F20+           CGCACCAACTCCAACAAATTCCATTTCTTCTTTACCATTGATCCAGGTTGCAACTTTTAC
                      ____________________________________________________________
consensus             CGCACCAACTCCAACAAATTCCATTTCTTCTTTACCATTGATCCAGGTTGCAACTTTTAC
 
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JMSF034J19+           CAGAACAAAATTGTTATCACAACCAGCTCTCCTTGGAGCCACATCATCATGGTGAACTAT
JMSF029E14+           CAGAACAAAGTTGTTATCACAACCAGGTCTCCTTGGAGTCTTATCATCATGGTGAACAAT
JMSF045F20+           CAGAACAAAATTGTTATCACAACCAGCTCTCCTTGGAGCCACATCATCATGGTGAACTAT
JMSF050N24+                                                GCCACATCATCATGGTGAACTAT
                      ____________________________________________________________
consensus             CAGAACAAAATTGTTATCACAACCAGCTCTCCTTGGAGCCACATCATCATGGTGAACTAT
 
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JMSF034J19+           ATCACCGCCATGAACCA                                           
JMSF029E14+           ATCGCCACCTTGAACCA                                           
JMSF045F20+           ATCACCGCCATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
JMSF050N24+           ATCACCGCCATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
JMSF013C21+                   CATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
                      ____________________________________________________________
consensus             ATCACCGCCATGAACCAGAGCGGAGCAGCTCAACAGCCACAGTACAACAGCTGTAGGAAC
 
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JMSF045F20+           AGAACAGTACGGAGCCGTACTTCTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
JMSF050N24+           AGAACAGTACGGAGCCGTACTTNTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
JMSF013C21+           AGAACAGTACGGAGCCGTACTTCTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
                      ____________________________________________________________
consensus             AGAACAGTACGGAGCCGTACTTCTCAATTCCATAACCTCGACCACAGAACCCTAGAAATC
 
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JMSF045F20+           CCTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTT                  
JMSF050N24+           CNTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTTCTTCCTNGTTTATTTTTT
JMSF013C21+           CCTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTTCTTCCTTGTTTATTTTTT
                      ____________________________________________________________
consensus             CCTCCGTTTCAGAAGATGAAGAAAAGGGGGCGAATGAATTTTCTTCCTTGTTTATTTTTT
 
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JMSF050N24+           TTTNTATTATTATNTATTT                                         
JMSF013C21+           TTTCTATTATTATTTATTTTTTGTTTGGGTGCGACATGTGAAGAGACAGTCAAAAGCACC
                      ____________________________________________________________
consensus             TTTCTATTATTATTTATTTTTTGTTTGGGTGCGACATGTGAAGAGACAGTCAAAAGCACC