Contig 002145:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012H06Sequence588002145 (3)ref|XP_004233031.1|1e-49PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]714003974 (3)ref|XP_010277020.1|1e-107PREDICTED: tyrosine-protein kinase Fer-like isoform X2 [Nelumbo nucifera]
JMSF012M03Sequence492002145 (3)ref|XP_004233031.1|3e-14PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]764003974 (3)ref|XP_010277020.1|4e-135PREDICTED: tyrosine-protein kinase Fer-like isoform X2 [Nelumbo nucifera]
JMSF053E03Sequence621002145 (3)ref|XP_004233031.1|1e-40PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]931003974 (3)ref|XP_010277020.1|2e-170PREDICTED: tyrosine-protein kinase Fer-like isoform X2 [Nelumbo nucifera]

Alignment

This contig is upended


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JMFF012H06+                                                                   CTAA
                      ____________________________________________________________
consensus                                                                     CTAA
 
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JMFF012H06+           AGTAAGAGTTAGTTGCTTAATCATGGAAAGTTTCTTATCTTTGAGTGTATCAACAAGAAT
JMSF053E03+                                                  TTTGAGTGTATCAACAAGAAT
                      ____________________________________________________________
consensus             AGTAAGAGTTAGTTGCTTAATCATGGAAAGTTTCTTATCTTTGAGTGTATCAACAAGAAT
 
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JMFF012H06+           AACATTAGGTCTGAGACCCTCTGCATCCAAAGCAAAAAGGTCTTCTAAAGATGGGATAGT
JMSF053E03+           AACATTAGGTCTGAGACCCTCTGCATCCAAAGCAAAAAGGTCTTCTAAAGATGGGATAGT
                      ____________________________________________________________
consensus             AACATTAGGTCTGAGACCCTCTGCATCCAAAGCAAAAAGGTCTTCTAAAGATGGGATAGT
 
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JMFF012H06+           GTCAAAAAGCTCCTTGAATCTTCTTTCCGGAATGACAAAATAAAAACCATCAGGAATTGG
JMSF053E03+           GTCAAAAAGCTCCTTGAATCTTCTTTCCGGAATGACAAAATAAAAACCATCAGGAATTGG
JMSF012M03+                                                           ATCAGGAATTGG
                      ____________________________________________________________
consensus             GTCAAAAAGCTCCTTGAATCTTCTTTCCGGAATGACAAAATAAAAACCATCAGGAATTGG
 
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JMFF012H06+           TTCAGCAAGTTCTCCAGTTTCCCACAGAATCTGTGAGGCTCTCTCTGCTGCCGAACTCTC
JMSF053E03+           TTCAGCAAGTTCTCCAGTTTCCCACAGAATCTGTGAGGCTCTCTCTGCTGCCGAACTCTC
JMSF012M03+           TTCAGCAAGTTCTCCAGTTTCCCACAGAATCTGTGAGGCTCTCTCTGCTGCCGAACTCTC
                      ____________________________________________________________
consensus             TTCAGCAAGTTCTCCAGTTTCCCACAGAATCTGTGAGGCTCTCTCTGCTGCCGAACTCTC
 
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JMFF012H06+           TAGCTCATGTTTGTTTGTTAATCCTTTTGAAGTTGAGGTTTCAGCAGAAGAAACAACAGA
JMSF053E03+           TAGCTCATGTTTGTTTGTTAATCCTTTTGAAGTTGAGGTTTCAGCAGAAGAAACAACAGA
JMSF012M03+           TAGCTCATGTTTGTTTGTTAATCCTTTTGAAGTTGAGGTTTCAGCAGAAGAAACAACAGA
                      ____________________________________________________________
consensus             TAGCTCATGTTTGTTTGTTAATCCTTTTGAAGTTGAGGTTTCAGCAGAAGAAACAACAGA
 
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JMFF012H06+           AACTGACTGTAATTTTTCCATAAAATCAGCTGGCCACCATGGAGCATCAGAATTTGATGC
JMSF053E03+           AACTGACTGTAATTTTTCCATAAAATCAGCTGGCCACCATGGAGCATCAGAATTTGATGC
JMSF012M03+           AACTGACTGTAATTTTTCCATAAAATCAGCTGGCCACCATGGAGCATCAGAATTTGATGC
                      ____________________________________________________________
consensus             AACTGACTGTAATTTTTCCATAAAATCAGCTGGCCACCATGGAGCATCAGAATTTGATGC
 
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JMFF012H06+           CTCAGATGGCCCAGTATCATCTCTTGGTTCCTCCATCTCAATGAAGATTCAAGATAAAAT
JMSF053E03+           CTCAGATGGCCCAGTATCATCTCTTGGTTCCTCCATCTCAATGAAGATTCAAGATAAAAT
JMSF012M03+           CTCAGATGGCCCAGTATCATCTCTTGGTTCCTCCATCTCAATGAAGATTCAAGATAAAAT
                      ____________________________________________________________
consensus             CTCAGATGGCCCAGTATCATCTCTTGGTTCCTCCATCTCAATGAAGATTCAAGATAAAAT
 
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JMFF012H06+           ATCATATTGCACCATTTCTAATCTCAAGAAAATGATTTTGCACAAAGTTGAAAATCTCCA
JMSF053E03+           ATCATATTGCACCATTTCTAATCTCAAGAAAATGATTTTGCACAAAGTTGAAAATCTCCA
JMSF012M03+           ATCATATTGCACCATTTCTAATCTCAAGAAAATGATTTTGCACAAAGTTGAAAATCTCCA
                      ____________________________________________________________
consensus             ATCATATTGCACCATTTCTAATCTCAAGAAAATGATTTTGCACAAAGTTGAAAATCTCCA
 
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JMFF012H06+           CAGGTTCAAACAAAAATTTGCTTGTAGTTCACCAAGATTGAGAACTTCATGACC      
JMSF053E03+           CAGGTTCAAACAAAAATTTGCTTGTAGTTCACCAAGATTGAGAACTTCATGACCTCCAAT
JMSF012M03+           CAGGTTCAAACAAAAATTTGCTTGTAGTTCACCAAGATTGAGAACTTCATGACCTCCAAT
                      ____________________________________________________________
consensus             CAGGTTCAAACAAAAATTTGCTTGTAGTTCACCAAGATTGAGAACTTCATGACCTCCAAT
 
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JMSF053E03+           CAAGCTTAGAAATGCGCTAAGCATCTATGAGGCGTTCAAGTCTGAACAAAAGTATCAAAT
JMSF012M03+           CAAGCTTAGAAATGCGCTAAGCATCTATGAGGCGTTCAAGTCTGAACAAAAGTATCAAAT
                      ____________________________________________________________
consensus             CAAGCTTAGAAATGCGCTAAGCATCTATGAGGCGTTCAAGTCTGAACAAAAGTATCAAAT
 
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JMSF053E03+           TCAAATGTATTCCCAAATGTATAATGTCAGTGAAAAGGGAAATAAAAATGAAGGAAACCC
JMSF012M03+           TCAAATGTATTCCCAAATGTATAATGTCAGTGAAAAGGGAAATAAAAATGAAGGAAACCC
                      ____________________________________________________________
consensus             TCAAATGTATTCCCAAATGTATAATGTCAGTGAAAAGGGAAATAAAAATGAAGGAAACCC