Contig 002141:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029J13Sequence407002141 (3)sp|Q6T7E8.1|PURA_TOBAC6e-37RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=767006878 (3)emb|CDP10068.1|1e-91unnamed protein product [Coffea canephora]
JMFF040H18Sequence596002141 (3)sp|Q6T7E8.1|PURA_TOBAC6e-79RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=710006878 (3)emb|CDP10068.1|2e-102unnamed protein product [Coffea canephora]
JMSF012F16Sequence453002141 (3)sp|Q6T7E8.1|PURA_TOBAC1e-36RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=769006878 (3)emb|CDP10068.1|1e-96unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF040H18+ AATAAAAGATGAGCCCGATCAGACACCAAGATCNTTCCTTTG
                      ____________________________________________________________
consensus AATAAAAGATGAGCCCGATCAGACACCAAGATCNTTCCTTTG
 
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JMFF040H18+ CATGAGACTCCATTCGCTTAAAGGCCATCAATTTCCTTAAAAAGTCCTGGCAGGTGCACC
                      ____________________________________________________________
consensus CATGAGACTCCATTCGCTTAAAGGCCATCAATTTCCTTAAAAAGTCCTGGCAGGTGCACC
 
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JMFF040H18+ ACTACTCCATTACCAATGACACAAATAGTCTCCTCGTTAAGAATCCCAGAGGGAACAAGG
                      ____________________________________________________________
consensus ACTACTCCATTACCAATGACACAAATAGTCTCCTCGTTAAGAATCCCAGAGGGAACAAGG
 
. : . : . : . : . : . :
JMFF040H18+ TGAAGTGCAAACTTCTTCCCCTCTGAATTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
JMFF029J13+ TTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
JMSF012F16+ TTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
                      ____________________________________________________________
consensus TGAAGTGCAAACTTCTTCCCCTCTGAATTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
 
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JMFF040H18+ TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCC
JMFF029J13+ TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCT
JMSF012F16+ TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCT
                      ____________________________________________________________
consensus TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCT
 
. : . : . : . : . : . :
JMFF040H18+ TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
JMFF029J13+ TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
JMSF012F16+ TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
                      ____________________________________________________________
consensus TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
 
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JMFF040H18+ AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
JMFF029J13+ AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
JMSF012F16+ AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
                      ____________________________________________________________
consensus AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
 
. : . : . : . : . : . :
JMFF040H18+ ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
JMFF029J13+ ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
JMSF012F16+ ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
                      ____________________________________________________________
consensus ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
 
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JMFF040H18+ CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
JMFF029J13+ CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
JMSF012F16+ CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
                      ____________________________________________________________
consensus CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
 
. : . : . : . : . : . :
JMFF040H18+ AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
JMFF029J13+ AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
JMSF012F16+ AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
                      ____________________________________________________________
consensus AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
 
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JMFF040H18+ GAGAAGGCGGAGAG
JMFF029J13+ GAGAAGGCGGAGAG
JMSF012F16+ GAGAAGGCGGAGAGGGTTTTGCAGTATTAGGAATTTAGATATATAACTTAGTCACCTGGC
                      ____________________________________________________________
consensus GAGAAGGCGGAGAGGGTTTTGCAGTATTAGGAATTTAGATATATAACTTAGTCACCTGGC