Contig 002141:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029J13Sequence407002141 (3)sp|Q6T7E8.1|PURA_TOBAC6e-37RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=767006878 (3)emb|CDP10068.1|1e-91unnamed protein product [Coffea canephora]
JMFF040H18Sequence596002141 (3)sp|Q6T7E8.1|PURA_TOBAC6e-79RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=710006878 (3)emb|CDP10068.1|2e-102unnamed protein product [Coffea canephora]
JMSF012F16Sequence453002141 (3)sp|Q6T7E8.1|PURA_TOBAC1e-36RecName: Full=Adenylosuccinate synthetase, chloroplastic; Short=AMPSase; Short=769006878 (3)emb|CDP10068.1|1e-96unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF040H18+                             AATAAAAGATGAGCCCGATCAGACACCAAGATCNTTCCTTTG
                      ____________________________________________________________
consensus                               AATAAAAGATGAGCCCGATCAGACACCAAGATCNTTCCTTTG
 
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JMFF040H18+           CATGAGACTCCATTCGCTTAAAGGCCATCAATTTCCTTAAAAAGTCCTGGCAGGTGCACC
                      ____________________________________________________________
consensus             CATGAGACTCCATTCGCTTAAAGGCCATCAATTTCCTTAAAAAGTCCTGGCAGGTGCACC
 
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JMFF040H18+           ACTACTCCATTACCAATGACACAAATAGTCTCCTCGTTAAGAATCCCAGAGGGAACAAGG
                      ____________________________________________________________
consensus             ACTACTCCATTACCAATGACACAAATAGTCTCCTCGTTAAGAATCCCAGAGGGAACAAGG
 
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JMFF040H18+           TGAAGTGCAAACTTCTTCCCCTCTGAATTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
JMFF029J13+                                      TTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
JMSF012F16+                                      TTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
                      ____________________________________________________________
consensus             TGAAGTGCAAACTTCTTCCCCTCTGAATTGTAGATGGTGTGCCCAGCATTAGCACCGCCC
 
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JMFF040H18+           TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCC
JMFF029J13+           TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCT
JMSF012F16+           TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCT
                      ____________________________________________________________
consensus             TGACAACGAGCGACGACGTCAAAATGCTTAGCTAAAACGTCAACGAGCTTGCCTTTACCT
 
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JMFF040H18+           TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
JMFF029J13+           TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
JMSF012F16+           TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
                      ____________________________________________________________
consensus             TCATCGCCCCACTGGCACCCCAGAACACCGGAGACCTGGCTAAGCGACTCAATCCGACTC
 
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JMFF040H18+           AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
JMFF029J13+           AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
JMSF012F16+           AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
                      ____________________________________________________________
consensus             AGTCTCGACTCGGTTGCTTCCCCGGACTCCACCACAGCCGACGTTTGCTTGGCAGAGCAC
 
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JMFF040H18+           ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
JMFF029J13+           ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
JMSF012F16+           ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
                      ____________________________________________________________
consensus             ACCGTGAGAGAAAAAGCAGGGGCCGCCATCTTCCTTAGCTGAAGCGGGAGAAACCTACAG
 
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JMFF040H18+           CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
JMFF029J13+           CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
JMSF012F16+           CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
                      ____________________________________________________________
consensus             CCTTGACCCCCACTCCGATACGGAGGAGGAATCGGCGGCGCGTAGATTGCGGACGAGTCA
 
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JMFF040H18+           AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
JMFF029J13+           AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
JMSF012F16+           AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
                      ____________________________________________________________
consensus             AGCCTGAGCGTTGAGGGATTCATGGTGGCGCTTAAAAGATTGAAACTCAAGGGAGAAGAA
 
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JMFF040H18+           GAGAAGGCGGAGAG                                              
JMFF029J13+           GAGAAGGCGGAGAG                                              
JMSF012F16+           GAGAAGGCGGAGAGGGTTTTGCAGTATTAGGAATTTAGATATATAACTTAGTCACCTGGC
                      ____________________________________________________________
consensus             GAGAAGGCGGAGAGGGTTTTGCAGTATTAGGAATTTAGATATATAACTTAGTCACCTGGC