Contig 002135:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS096G10Sequence627002135 (5)ref|XP_004245034.1|6e-19PREDICTED: polyadenylate-binding protein-interacting protein 7 [Solanum lycoper
JMSF011N23Sequence226002135 (5)699004213 (4)ref|XP_006353838.1|4e-66PREDICTED: protein CTC-INTERACTING DOMAIN 7-like isoform X1 [Solanum tuberosum]
JMSF027D07Sequence629002135 (5)ref|XP_009783102.1|1e-17PREDICTED: polyadenylate-binding protein-interacting protein 7 [Nicotiana sylve561007540 (5)ref|XP_011077495.1|4e-30PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Sesamu
JMSF029F11Sequence274002135 (5)701004213 (4)ref|XP_006353838.1|4e-50PREDICTED: protein CTC-INTERACTING DOMAIN 7-like isoform X1 [Solanum tuberosum]
JMSF049H22Sequence345002135 (5)156017270

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS096G10+ GCAACGCC
                      ____________________________________________________________
consensus GCAACGCC
 
. : . : . : . : . : . :
JMFS096G10+ AGTAGCGGCGCACTTCATCATCGGAGTTATTTGAAACAGATGATTCCGATCTATCTAATA
JMSF027D07+ TGAAACAGATGATTCCGATCTATCTAATA
                      ____________________________________________________________
consensus AGTAGCGGCGCACTTCATCATCGGAGTTATTTGAAACAGATGATTCCGATCTATCTAATA
 
. : . : . : . : . : . :
JMFS096G10+ CAGATTTCCCTAGTGTGCTTGTGTTCACATCAGCAAACTTTGATGCATCCGTATTGCTAG
JMSF027D07+ CAGATTTCCCTAGTGTGCTTGTGTTCACATCAGCAAACTTTGATGCATCCGTATTGCTAG
                      ____________________________________________________________
consensus CAGATTTCCCTAGTGTGCTTGTGTTCACATCAGCAAACTTTGATGCATCCGTATTGCTAG
 
. : . : . : . : . : . :
JMFS096G10+ TATTGCCAGAGGGTGATCTTAGTGCAAAAGGAATAAATTCTGCTGCATTTGGATTCAAAG
JMSF027D07+ TATTGCCAGAGGGTGATCTTAGTGCAAAAGGAATAAATTCTGCTGCANTTGGATTCAAAG
                      ____________________________________________________________
consensus TATTGCCAGAGGGTGATCTTAGTGCAAAAGGAATAAATTCTGCTGCATTTGGATTCAAAG
 
. : . : . : . : . : . :
JMFS096G10+ TTGTTGCCTTGGCTGAACTGTGATCTCTGTCACCGGTAGGAATCCCTTTTCCCAAAAAGC
JMSF027D07+ TTGTTGCCTNGGCTGAACTGTGACCTCAGTCACCGGTAGGAATCCCTTTTCCCAAAAAGC
                      ____________________________________________________________
consensus TTGTTGCCTTGGCTGAACTGTGATCTCTGTCACCGGTAGGAATCCCTTTTCCCAAAAAGC
 
. : . : . : . : . : . :
JMFS096G10+ TCATTCTTTTTCTCTTCCTTGTTCAAATAGTAGATAGATAAGAAAAAACAGTTTCTACTA
JMSF027D07+ TCATTCTTTTTCTCTTCCTNGTTCAAATAGTAGATAGATAAGAAAAAACAGTTTCTACTA
                      ____________________________________________________________
consensus TCATTCTTTTTCTCTTCCTTGTTCAAATAGTAGATAGATAAGAAAAAACAGTTTCTACTA
 
. : . : . : . : . : . :
JMFS096G10+ GCACAAAATAACTTCTAATGGTTACAAAGTAGCAATATTGCAGAGCATATCAGCCAAAAC
JMSF049H22+ TAATGGNTACAAAGTAGCNATATTGCAGNGCATATCNGCCNAAAC
JMSF027D07+ GCACAAAATAACTTCTAATGGTTACAAAGTAGCAATATTGCAGAGCATATCAGCCAAAAC
                      ____________________________________________________________
consensus GCACAAAATAACTTCTAATGGTTACAAAGTAGCAATATTGCAGAGCATATCAGCCAAAAC
 
. : . : . : . : . : . :
JMFS096G10+ CTTTACGAAGCTCTATAATCGAGAGCGCCATATCCAAAGGTTCCATTAGCGATTACGAGA
JMSF029F11+ ATCGAGAGCGCCNTATCCNAAGGTTCCCNTAGCGNTTNCGAGA
JMSF049H22+ CNTTNCGNAGCTCTATNATCGAGAGCGCCNTATCCNAAGGNTCCCNTAGCGATTACGAGA
JMSF027D07+ CTTTACGAAGCTCTATAATCGAGAGCGCCATATCCAAAGGTTCCANTAGCGATTACGAGA
                      ____________________________________________________________
consensus CTTTACGAAGCTCTATAATCGAGAGCGCCATATCCAAAGGTTCCCTTAGCGATTACGAGA
 
. : . : . : . : . : . :
JMFS096G10+ AACAGTTGTAGAGAGAGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACAGAGAAA
JMSF029F11+ AACNNTTGTAGAGAGNGAAAGCGATAGAATAGAAAGNGGAAGTGNTAAAATACNGNGAAA
JMSF049H22+ AACNNTTGTAGAGNGNGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACNGNGAAA
JMSF027D07+ AACAGTTGTAGAGAGAGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACAGAGAAA
JMSF011N23+ GAAAGCGATAGAATAGAAAGAGGAAGTGNTAAAATACNGNGAAA
                      ____________________________________________________________
consensus AACAGTTGTAGAGAGAGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACAGAGAAA
 
. : . : . : . : . : . :
JMFS096G10+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF029F11+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF049H22+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF027D07+ AGAAGAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF011N23+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
                      ____________________________________________________________
consensus AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
 
. : . : . : . : . : . :
JMFS096G10+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
JMSF029F11+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTTTTC
JMSF049H22+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
JMSF027D07+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
JMSF011N23+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
                      ____________________________________________________________
consensus ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
 
. : . : . : . : . : . :
JMFS096G10+ TTCTTCTTCTTCTTCTTCT
JMSF029F11+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTT
JMSF049H22+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC
JMSF027D07+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC
JMSF011N23+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC
                      ____________________________________________________________
consensus TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC