| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS096G10 | Sequence | 627 | 002135 (5) | ref|XP_004245034.1| | 6e-19 | PREDICTED: polyadenylate-binding protein-interacting protein 7 [Solanum lycoper | |||||
| JMSF011N23 | Sequence | 226 | 002135 (5) | 699 | 004213 (4) | ref|XP_006353838.1| | 4e-66 | PREDICTED: protein CTC-INTERACTING DOMAIN 7-like isoform X1 [Solanum tuberosum] | |||
| JMSF027D07 | Sequence | 629 | 002135 (5) | ref|XP_009783102.1| | 1e-17 | PREDICTED: polyadenylate-binding protein-interacting protein 7 [Nicotiana sylve | 561 | 007540 (5) | ref|XP_011077495.1| | 4e-30 | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Sesamu |
| JMSF029F11 | Sequence | 274 | 002135 (5) | 701 | 004213 (4) | ref|XP_006353838.1| | 4e-50 | PREDICTED: protein CTC-INTERACTING DOMAIN 7-like isoform X1 [Solanum tuberosum] | |||
| JMSF049H22 | Sequence | 345 | 002135 (5) | 156 | 017270 | ||||||
This contig is upended
. : . : . : . : . : . :
JMFS096G10+ GCAACGCC
____________________________________________________________
consensus GCAACGCC
. : . : . : . : . : . :
JMFS096G10+ AGTAGCGGCGCACTTCATCATCGGAGTTATTTGAAACAGATGATTCCGATCTATCTAATA
JMSF027D07+ TGAAACAGATGATTCCGATCTATCTAATA
____________________________________________________________
consensus AGTAGCGGCGCACTTCATCATCGGAGTTATTTGAAACAGATGATTCCGATCTATCTAATA
. : . : . : . : . : . :
JMFS096G10+ CAGATTTCCCTAGTGTGCTTGTGTTCACATCAGCAAACTTTGATGCATCCGTATTGCTAG
JMSF027D07+ CAGATTTCCCTAGTGTGCTTGTGTTCACATCAGCAAACTTTGATGCATCCGTATTGCTAG
____________________________________________________________
consensus CAGATTTCCCTAGTGTGCTTGTGTTCACATCAGCAAACTTTGATGCATCCGTATTGCTAG
. : . : . : . : . : . :
JMFS096G10+ TATTGCCAGAGGGTGATCTTAGTGCAAAAGGAATAAATTCTGCTGCATTTGGATTCAAAG
JMSF027D07+ TATTGCCAGAGGGTGATCTTAGTGCAAAAGGAATAAATTCTGCTGCANTTGGATTCAAAG
____________________________________________________________
consensus TATTGCCAGAGGGTGATCTTAGTGCAAAAGGAATAAATTCTGCTGCATTTGGATTCAAAG
. : . : . : . : . : . :
JMFS096G10+ TTGTTGCCTTGGCTGAACTGTGATCTCTGTCACCGGTAGGAATCCCTTTTCCCAAAAAGC
JMSF027D07+ TTGTTGCCTNGGCTGAACTGTGACCTCAGTCACCGGTAGGAATCCCTTTTCCCAAAAAGC
____________________________________________________________
consensus TTGTTGCCTTGGCTGAACTGTGATCTCTGTCACCGGTAGGAATCCCTTTTCCCAAAAAGC
. : . : . : . : . : . :
JMFS096G10+ TCATTCTTTTTCTCTTCCTTGTTCAAATAGTAGATAGATAAGAAAAAACAGTTTCTACTA
JMSF027D07+ TCATTCTTTTTCTCTTCCTNGTTCAAATAGTAGATAGATAAGAAAAAACAGTTTCTACTA
____________________________________________________________
consensus TCATTCTTTTTCTCTTCCTTGTTCAAATAGTAGATAGATAAGAAAAAACAGTTTCTACTA
. : . : . : . : . : . :
JMFS096G10+ GCACAAAATAACTTCTAATGGTTACAAAGTAGCAATATTGCAGAGCATATCAGCCAAAAC
JMSF049H22+ TAATGGNTACAAAGTAGCNATATTGCAGNGCATATCNGCCNAAAC
JMSF027D07+ GCACAAAATAACTTCTAATGGTTACAAAGTAGCAATATTGCAGAGCATATCAGCCAAAAC
____________________________________________________________
consensus GCACAAAATAACTTCTAATGGTTACAAAGTAGCAATATTGCAGAGCATATCAGCCAAAAC
. : . : . : . : . : . :
JMFS096G10+ CTTTACGAAGCTCTATAATCGAGAGCGCCATATCCAAAGGTTCCATTAGCGATTACGAGA
JMSF029F11+ ATCGAGAGCGCCNTATCCNAAGGTTCCCNTAGCGNTTNCGAGA
JMSF049H22+ CNTTNCGNAGCTCTATNATCGAGAGCGCCNTATCCNAAGGNTCCCNTAGCGATTACGAGA
JMSF027D07+ CTTTACGAAGCTCTATAATCGAGAGCGCCATATCCAAAGGTTCCANTAGCGATTACGAGA
____________________________________________________________
consensus CTTTACGAAGCTCTATAATCGAGAGCGCCATATCCAAAGGTTCCCTTAGCGATTACGAGA
. : . : . : . : . : . :
JMFS096G10+ AACAGTTGTAGAGAGAGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACAGAGAAA
JMSF029F11+ AACNNTTGTAGAGAGNGAAAGCGATAGAATAGAAAGNGGAAGTGNTAAAATACNGNGAAA
JMSF049H22+ AACNNTTGTAGAGNGNGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACNGNGAAA
JMSF027D07+ AACAGTTGTAGAGAGAGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACAGAGAAA
JMSF011N23+ GAAAGCGATAGAATAGAAAGAGGAAGTGNTAAAATACNGNGAAA
____________________________________________________________
consensus AACAGTTGTAGAGAGAGAAAGCGATAGAATAGAAAGAGGAAGTGATAAAATACAGAGAAA
. : . : . : . : . : . :
JMFS096G10+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF029F11+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF049H22+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF027D07+ AGAAGAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
JMSF011N23+ AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
____________________________________________________________
consensus AAAAAAAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGTGGGAGTATATCCTATTCACTA
. : . : . : . : . : . :
JMFS096G10+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
JMSF029F11+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTTTTC
JMSF049H22+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
JMSF027D07+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
JMSF011N23+ ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
____________________________________________________________
consensus ATTAGCACAGAAAAAGAGATTGAATTCTCGTTGTTGTTCATTTCCTTCCTCTTCTTCTTC
. : . : . : . : . : . :
JMFS096G10+ TTCTTCTTCTTCTTCTTCT
JMSF029F11+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTT
JMSF049H22+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC
JMSF027D07+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC
JMSF011N23+ TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC
____________________________________________________________
consensus TTCTTCTTCTTCTTCTTCTTCTTCGAGGATTGTGGCGAGAGGGTTTAATTTCGTTTTTCC