Contig 002132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS001C08Sequence561002132 (5)ref|XP_009587346.1|156PREDICTED: uncharacterized protein LOC104085097 [Nicotiana tomentosiformis]
JMFS013E07Sequence598002132 (5)ref|XP_009587346.1|190PREDICTED: uncharacterized protein LOC104085097 [Nicotiana tomentosiformis]
JMFS158D12Sequence486002132 (5)ref|XP_009587346.1|144PREDICTED: uncharacterized protein LOC104085097 [Nicotiana tomentosiformis]
JMFS166H08Sequence158002132 (5)emb|CDO97824.1|2e-16unnamed protein product [Coffea canephora]
JMSF011B18Sequence232002132 (5)emb|CAN65011.1|1e-11hypothetical protein VITISV_027350 [Vitis vinifera]724020316ref|XP_009605786.1|3e-119PREDICTED: nuclear pore complex protein Nup107, partial [Nicotiana tomentosifor

Alignment

This contig is upended


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JMFS013E07+                              GTCCTCCACAATTCTGTGCCTTCCACTAAACCCAAATCTAA
                      ____________________________________________________________
consensus                                GTCCTCCACAATTCTGTGCCTTCCACTAAACCCAAATCTAA
 
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JMFS013E07+           TTGACTCTGAAACATTGCGGCAAGAATTCTCAAAATGTAATACCAATTCAGGTATAGTCA
JMFS001C08+                                           AAATGTAATACCAATTCAGGTATAGTCA
                      ____________________________________________________________
consensus             TTGACTCTGAAACATTGCGGCAAGAATTCTCAAAATGTAATACCAATTCAGGTATAGTCA
 
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JMFS013E07+           TTAACCCTTTAAGAGCTGAATCCAATAGCGAAGCAAATAAAGAAAAGGTTGTGCCCTCAT
JMFS158D12+                                                   AGAAAAGGTTGTGCCCTCAT
JMFS001C08+           TTAACCCTTTAAGAGCTGAATCCAATAGCGAAGCAAATAAAGAAAAGGTTGTGCCCTCAT
                      ____________________________________________________________
consensus             TTAACCCTTTAAGAGCTGAATCCAATAGCGAAGCAAATAAAGAAAAGGTTGTGCCCTCAT
 
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JMFS013E07+           CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
JMFS158D12+           CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
JMFS001C08+           CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
                      ____________________________________________________________
consensus             CATCTACCACTGCATCATGCTCCTCCTTGCATGTTTTAAGGGAAATGCTTCCACCTTGGC
 
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JMFS013E07+           GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
JMFS158D12+           GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
JMFS001C08+           GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
                      ____________________________________________________________
consensus             GAGTGGCATCGACACCAAAATCTGTCCCGGAAATTACATGGCTCTCGAGAGAAGATCTCC
 
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JMFS013E07+           ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
JMFS158D12+           ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
JMFS001C08+           ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
                      ____________________________________________________________
consensus             ATTTTGTGTCATTTTGCATCTTTAGAGGTGTTGTTACATGATCACTATGAAGGCTTTCAA
 
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JMFS166H08-                       TACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
JMFS013E07+           ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
JMFS158D12+           ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
JMFS001C08+           ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
                      ____________________________________________________________
consensus             ATTCTTGCTTGATACTTTCCAGAAAAAGAGCTGAATTTGACCTAACCTCTGCTAACCTAT
 
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JMFS166H08-           CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMFS013E07+           CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMFS158D12+           CAGCTGATTTTTCTCGGTGCGGACACAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMFS001C08+           CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
JMSF011B18+                   TTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
                      ____________________________________________________________
consensus             CAGCTGATTTTTCTCGGTGCGGAGATAGGCTAGAAGGAGAATGTCGTTTGCCGTATCGAC
 
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JMFS166H08-           GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAA          
JMFS013E07+           GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
JMFS158D12+           GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
JMFS001C08+           GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
JMSF011B18+           GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
                      ____________________________________________________________
consensus             GAAAGCGCTGTCTGATACTGAGATCTTCGGGGTCAAAGCTGCTGGGGGAAGTCTCCATAT
 
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JMFS013E07+           CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
JMFS158D12+           CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCCGC
JMFS001C08+           CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
JMSF011B18+           CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
                      ____________________________________________________________
consensus             CCACCTCCATTGTGGTAAACACCGAAATTTGATGGTCCCAAATTCGTGAAAAATCTCTGC
 
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JMFS013E07+           AACGGTGGTACTTGAAG                                           
JMFS158D12+           ACCGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGC              
JMFS001C08+           AACGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGC              
JMSF011B18+           AACGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGCGGGAAGGGTACTCC
                      ____________________________________________________________
consensus             AACGGTGGTACTTGAAGTAAAGCTTAAACCCTAGAGCTCTAAGCGCGGGAAGGGTACTCC