Contig 002131:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+                            CTTCACTAGAACTAACAAATTCAATTAGATGAGGTCGACTGTA
                      ____________________________________________________________
consensus                              CTTCACTAGAACTAACAAATTCAATTAGATGAGGTCGACTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           ATTCAATGCATGGGCATCGAATTGTTCCCCCAGACAGAACCCTGGCCATCAATAGTTCCA
                      ____________________________________________________________
consensus             ATTCAATGCATGGGCATCGAATTGTTCCCCCAGACAGAACCCTGGCCATCAATAGTTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           TTATTGCCTGTTATTGCAACATCAACTAAATTATTTCCCGTGATCAAGCTGCGATATCTT
                      ____________________________________________________________
consensus             TTATTGCCTGTTATTGCAACATCAACTAAATTATTTCCCGTGATCAAGCTGCGATATCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           TGACCTGGCACATCAATACCTCGCCCATAAGATGGTAAGGGATCAACTACATCCCAATGA
                      ____________________________________________________________
consensus             TGACCTGGCACATCAATACCTCGCCCATAAGATGGTAAGGGATCAACTACATCCCAATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           GTGTAATCCTCGGATCCTAGAATAATGGCATTTTTTTCCAGGAAGAGTGTAAGGTGACTG
                      ____________________________________________________________
consensus             GTGTAATCCTCGGATCCTAGAATAATGGCATTTTTTTCCAGGAAGAGTGTAAGGTGACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           GTAAGGTTGATGCTACCAGTCAGCCACCTGCCAGCTGGAACATAGAGTTGTGCGCCCCCC
                      ____________________________________________________________
consensus             GTAAGGTTGATGCTACCAGTCAGCCACCTGCCAGCTGGAACATAGAGTTGTGCGCCCCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           TTGTCAGCAAATGACTTAAGATAAAATACCGCATTCTGAAATGCAACAGTATTCGATGTT
                      ____________________________________________________________
consensus             TTGTCAGCAAATGACTTAAGATAAAATACCGCATTCTGAAATGCAACAGTATTCGATGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           TTCCCGTCCCCCACAGCACCAAAGTCCAAAACCGATGCTCTGTGAGGCCTGGGTTTCACC
                      ____________________________________________________________
consensus             TTCCCGTCCCCCACAGCACCAAAGTCCAAAACCGATGCTCTGTGAGGCCTGGGTTTCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           GGTTTACTGAGAGTGCATTCTCCCTCGATTTGAGCTTCAGTATGCTCTACACTGTCATTC
JMSF011B08+                     GAGTGCATTCTCCCTCGATTTGAGCTTCAGTATGCTCTACACTGTCATTC
                      ____________________________________________________________
consensus             GGTTTACTGAGAGTGCATTCTCCCTCGATTTGAGCTTCAGTATGCTCTACACTGTCATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           AAAACCAATAGCAAAAGGAGAACTACTTACTAGCCCCTTCATGGGTTTCCTGTCTTTCTC
JMSF011B08+           AAAACCAATAGCAAAAGGAGAAC----TACTAGCCCCTTCATGGGTTTCCTGTCTTTCTC
                      ____________________________________________________________
consensus             AAAACCAATAGCAAAAGGAGAACTACTTACTAGCCCCTTCATGGGTTTCCTGTCTTTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           CCGCATTGTGGTTAGAGTGAAAAGGCAGGACCACAAGTCCACCACACCACCCACCCTCTG
JMSF011B08+           CCGCATTGTGGTTAGAGTGAAAAGGCAGGACCACAAGTCCACCACACCACCCACCCTCTG
                      ____________________________________________________________
consensus             CCGCATTGTGGTTAGAGTGAAAAGGCAGGACCACAAGTCCACCACACCACCCACCCTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF024C05+           ATAGGCTTGAGCAGAGTGAAGAAGACGCAGAGAGGCGTATGGCAGT              
JMSF011B08+           ATAGGCTTGAGCAGAGTGAAGAAGACGCAGAGAGGCGTATGGCAGTGAAGTGTGAATATC
                      ____________________________________________________________
consensus             ATAGGCTTGAGCAGAGTGAAGAAGACGCAGAGAGGCGTATGGCAGTGAAGTGTGAATATC