Contig 002125:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+                        AAATGGAAAGCTGCTGGCGGTTTTTGGATTTTTAAGCCAATTAGATG
                      ____________________________________________________________
consensus                          AAATGGAAAGCTGCTGGCGGTTTTTGGATTTTTAAGCCAATTAGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           GGAATGGAGAGGGTGAAGGCCTACAATTGATTAGTAAGCCCTGAACATATTACTCCTTGT
                      ____________________________________________________________
consensus             GGAATGGAGAGGGTGAAGGCCTACAATTGATTAGTAAGCCCTGAACATATTACTCCTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           TCAACACTTTGGGAACTTTGATGTAAGGCTCCTCATAGCTTGGCACAGCAGCTATCATGG
                      ____________________________________________________________
consensus             TCAACACTTTGGGAACTTTGATGTAAGGCTCCTCATAGCTTGGCACAGCAGCTATCATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           CTTCCCTATTTTCAAAAATTTCAGGAAAATCATCTCGCAAGTTGTCACCTTCAGTATCTG
                      ____________________________________________________________
consensus             CTTCCCTATTTTCAAAAATTTCAGGAAAATCATCTCGCAAGTTGTCACCTTCAGTATCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           CCCTAATAGCTGGCTCAATACTTTGAAGATCTACGGCTTGAAGTTGACCAAACACACAAA
                      ____________________________________________________________
consensus             CCCTAATAGCTGGCTCAATACTTTGAAGATCTACGGCTTGAAGTTGACCAAACACACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           CATATAGAGGGAGACAGAGAGAAACCAGTCTATCACTTGTCGAATTTTTAGACCGAATTC
                      ____________________________________________________________
consensus             CATATAGAGGGAGACAGAGAGAAACCAGTCTATCACTTGTCGAATTTTTAGACCGAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           TTCAACCTCAGTTGGGGTGAGAGAAATCCGAGCTGTTTCGGCCAAACGAGGGACATCAGG
                      ____________________________________________________________
consensus             TTCAACCTCAGTTGGGGTGAGAGAAATCCGAGCTGTTTCGGCCAAACGAGGGACATCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           GGGCTGAAGAGCACTATTCGCTTTCGTGGAGTAGCTCCGGCGGGGCACCTGCCTCAACCC
                      ____________________________________________________________
consensus             GGGCTGAAGAGCACTATTCGCTTTCGTGGAGTAGCTCCGGCGGGGCACCTGCCTCAACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           GAATGGCTGTGTCCGAAAAACAATTCGTATCCGGTTGAAGGTAGCAGCAGTTGCCATTGT
JMFF039G23+                                           GGTTGAAGGTAGCAGCAGTTGCCATTGT
                      ____________________________________________________________
consensus             GAATGGCTGTGTCCGAAAAACAATTCGTATCCGGTTGAAGGTAGCAGCAGTTGCCATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041L23+           TGGACACAGAGAAAGCAATGTTCTACTTCCCATTGTTGTTATTACAGTGTTTCT      
JMFF039G23+           TGGACACAGAGAAAGCAATGTTCTACTTCCCATTGTTGTTATTACAGTGTTTCTTAAGAC
                      ____________________________________________________________
consensus             TGGACACAGAGAAAGCAATGTTCTACTTCCCATTGTTGTTATTACAGTGTTTCTTAAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039G23+           GATTATCCAGATTGATGAATTTGGAGCCGTCGAAATAATCCGACCATACAGGGGAGGCCA
                      ____________________________________________________________
consensus             GATTATCCAGATTGATGAATTTGGAGCCGTCGAAATAATCCGACCATACAGGGGAGGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF039G23+           GCCCACCAAAAATATAATAATTAAAAAATAATAATAATAATAATAGAACAGTGACAAACT
                      ____________________________________________________________
consensus             GCCCACCAAAAATATAATAATTAAAAAATAATAATAATAATAATAGAACAGTGACAAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002C11+                                                             GAGACTCTTG
JMFF039G23+           GACAATTTGTAAATAAGCATATAAATATAAGGAAAATACTACGTGTACCTGAGACTCTTG
JMSF010F08+                                                           CTGAGACTCTTG
                      ____________________________________________________________
consensus             GACAATTTGTAAATAAGCATATAAATATAAGGAAAATACTACGTGTACCTGAGACTCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002C11+           CGATAGACCGAGAGTGCGTCAGTGTGACTGTGCGAGCTGCAAGCTGCGATGAAGATGGCG
JMFF039G23+           CGATAGACCGAGAGTGCGTCAGTGTGACTGTGCGAGCTGCAAGCTGCGATGAAGATGGCG
JMSF010F08+           CGATAGACCGAGAGTGCGTCAGTGTGACTGTGCGAGCTGCAAGCTGCGATGAAGATGGCG
                      ____________________________________________________________
consensus             CGATAGACCGAGAGTGCGTCAGTGTGACTGTGCGAGCTGCAAGCTGCGATGAAGATGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002C11+           ATTGATCACTGGAGTCTGACGACAGCGTCTGGCGTATGGTCGTTGCGAGTGGCTAAATGG
JMFF039G23+           ATTGATCACTGGAGTCTGACGACAGCGTCTGGCGTATGGTCGTTGCGAGTGGCTAAATGG
JMSF010F08+           ATTGATCACTGGAGTCTGACGACAGCGTCTGGCGTATGGTCGTTGCGAGTGGCTAAATGG
                      ____________________________________________________________
consensus             ATTGATCACTGGAGTCTGACGACAGCGTCTGGCGTATGGTCGTTGCGAGTGGCTAAATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002C11+           AGTGAGTGCTGACTACTGTAGCATGCTGCCTGTAGAGTGTAGACTGTAGTACTGTTGGCT
JMFF039G23+           AGTGAGTGCTGACTACTGTAGCATGCTGCCTGTAGAGTGTAGACTGTAGTACTGTTGGCT
JMSF010F08+           AGTGAGTGCTGACTACTGTAGCATGCTGCCTGTAGAGTGTAGACTGTAGTACTGTTGGCT
                      ____________________________________________________________
consensus             AGTGAGTGCTGACTACTGTAGCATGCTGCCTGTAGAGTGTAGACTGTAGTACTGTTGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002C11+           ATGGCAGAATGGTGGTGTGCGATCACTGTGGTAGACGGCACCGTGGCGGATAGCGGACTG
JMFF039G23+           ATGGCAGAATGGTGGTGTGCGATCACTGTGGTAGACGGCACCGTGGCGGATAGCGGACTG
JMSF010F08+           ATGGCAGAATGGTGGTGTGCGATCACTGTGGTAGACGGCACCGTGGCGGATAGCGGACTG
                      ____________________________________________________________
consensus             ATGGCAGAATGGTGGTGTGCGATCACTGTGGTAGACGGCACCGTGGCGGATAGCGGACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF002C11+           GCGGTGTGCCGGCTCTAGGCCTC                                     
JMFF039G23+           GCGGTGTGCCGGCTCTAGGCCTCTGGGGAGTGCGTGAAGTGGAGAAGCAT          
JMSF010F08+           GCGGTGTGCCGGCTCTAGGCCTCTGGGGAGTGCGTGAAGTGGAGAAGCATTAAAGCCCTC
                      ____________________________________________________________
consensus             GCGGTGTGCCGGCTCTAGGCCTCTGGGGAGTGCGTGAAGTGGAGAAGCATTAAAGCCCTC