Contig 002122:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025P15-                               CGCATTCATGAGGTTGTTTTTATTTAATTAAAAAAGATT
                      ____________________________________________________________
consensus                                  CGCATTCATGAGGTTGTTTTTATTTAATTAAAAAAGATT
 
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rJMSF025P15-          ATACAAGAACTTGGCCTTGATTTTTTTTTTTCCCTAACCCAATTACATTCACAGCTTTCC
                      ____________________________________________________________
consensus             ATACAAGAACTTGGCCTTGATTTTTTTTTTTCCCTAACCCAATTACATTCACAGCTTTCC
 
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rJMSF025P15-          TTTGGCANGCATTAAAGCGCTTTATTTGGACAACTAAANGCTTTGGGGANGCNCGAGTCT
                      ____________________________________________________________
consensus             TTTGGCANGCATTAAAGCGCTTTATTTGGACAACTAAANGCTTTGGGGANGCNCGAGTCT
 
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rJMSF025P15-          TCATAGTTGGNAANATATCTTCATCAGGCATCCAAAGTCGGATCNCCTTGANCATGAGGA
                      ____________________________________________________________
consensus             TCATAGTTGGNAANATATCTTCATCAGGCATCCAAAGTCGGATCNCCTTGANCATGAGGA
 
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rJMSF025P15-          CGGNGGGAGCTGGCAGGNCTACTTGGGCATCAGGCGACNCTACNCCAAGGGGGGCTTCAA
                      ____________________________________________________________
consensus             CGGNGGGAGCTGGCAGGNCTACTTGGGCATCAGGCGACNCTACNCCAAGGGGGGCTTCAA
 
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rJMSF025P15-          NGACCNCAAAAGNGTTCCCNATTATCNGNCGCGATTCGTTCNGCTTCTTCAAAAAGGGAG
                      ____________________________________________________________
consensus             NGACCNCAAAAGNGTTCCCNATTATCNGNCGCGATTCGTTCNGCTTCTTCAAAAAGGGAG
 
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rJMSF025P15-          CTNGANCNCGAAAATTCAANCCNCCANAGTTTTGAAANCTATAGCGTTANANGGCGACNC
                      ____________________________________________________________
consensus             CTNGANCNCGAAAATTCAANCCNCCANAGTTTTGAAANCTATAGCGTTANANGGCGACNC
 
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rJMSF025P15-          ACAGCTTAANATCGTCATCCCNAACCNGANAGCCTAAAACTCAANCCGGANGCTTATGAC
JMSF025P15+                                                   TCAATCCGGATGCTTATGAC
                      ____________________________________________________________
consensus             ACAGCTTAANATCGTCATCCCNAACCNGANAGCCTAAAACTCAATCCGGATGCTTATGAC
 
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rJMSF025P15-          NCAGGGTNGGANAAACGGGTTACCAGGATCAGTAANCAAATAANGAGTTCNCAANGGTAT
JMSF025P15+           TCATGGTTGGAGAAACGGGTTACCAGGATCAGTAATCAAATAATGAGTTCGCAATGGTAT
                      ____________________________________________________________
consensus             TCATGGTTGGAGAAACGGGTTACCAGGATCAGTAATCAAATAATGAGTTCGCAATGGTAT
 
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rJMSF025P15-          GGGACTCAAACCACTACCNCTTCNATCGAAAATCTTTAGTTATTTA              
JMSF025P15+           GGGACTCAAACCACTACCTCTTCGATCGAAGATCTTTAGTTATTTAGAAGAAACCCGAGG
                      ____________________________________________________________
consensus             GGGACTCAAACCACTACCTCTTCGATCGAAGATCTTTAGTTATTTAGAAGAAACCCGAGG
 
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JMSF025P15+           AGGCATTAAAGAATATCTTAATAGAATTCAGCTATTACTATACATACAGGGTCAAAAAAT
                      ____________________________________________________________
consensus             AGGCATTAAAGAATATCTTAATAGAATTCAGCTATTACTATACATACAGGGTCAAAAAAT
 
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JMSF025P15+           GAATGACTCTCATATTTGAATTTCAGTCATCCTGGTAAATCTCTTTCTAAATGATCCAAT
JMSF012B21+                                TTCAGTCATCCTGGTAAATCTCTTTCTAAATGATCCAAT
                      ____________________________________________________________
consensus             GAATGACTCTCATATTTGAATTTCAGTCATCCTGGTAAATCTCTTTCTAAATGATCCAAT
 
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JMSF025P15+           CTATCTGCTTCCACTGTATCAACAGAGGGGAGCAAAAACATGTTTTGCATGCTTACATTT
JMSF012B21+           CTATCTGCTTCCACTGTATCAACAGAGGGGAGCAAAAACATGTTTTGCATGCTTACATTT
                      ____________________________________________________________
consensus             CTATCTGCTTCCACTGTATCAACAGAGGGGAGCAAAAACATGTTTTGCATGCTTACATTT
 
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JMSF025P15+           CAGCGCTATATGCCTATATTATATTGCTTTCATTGTGATGCGGACAAGATGCAGAAACCC
JMSF012B21+           CAGCGCTATATGCCTATATTATATTGCTTTCATTGTGATGCGGACAAGATGCAGAAACCC
                      ____________________________________________________________
consensus             CAGCGCTATATGCCTATATTATATTGCTTTCATTGTGATGCGGACAAGATGCAGAAACCC
 
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JMSF025P15+           ATCCACATCCTGGAAGTTGAAATCCAGGGCTTTTCGAACGGATAGCATACCCTCTTTGCA
JMSF012B21+           ATCCACATCCTGGAAGTTGAAATCCAGGGCTTTTCGAACGGATAGCATACCCTCTTTGCA
                      ____________________________________________________________
consensus             ATCCACATCCTGGAAGTTGAAATCCAGGGCTTTTCGAACGGATAGCATACCCTCTTTGCA
 
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JMSF025P15+           CAGGGCCTCTCCTTTTCTTGGATCAGCAGCTGCAAAAGCAGCTCTTGATTTTCTGGAGGC
JMSF012B21+           CAGGGCCTCTCCTTTTCTTGGATCAGCAGCTGCAAAAGCAGCTCTTGATTTTCTGGAGGC
                      ____________________________________________________________
consensus             CAGGGCCTCTCCTTTTCTTGGATCAGCAGCTGCAAAAGCAGCTCTTGATTTTCTGGAGGC
 
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JMSF025P15+           ATCCATTGCAAGACTAACTTCCTAGGCCCTCTAAGTCGCTTAGAACTCCTCGAGCTCGAC
JMSF012B21+           ATCCATTGCAAGACTAACTTCCTAGGCCCTCTAAGTCGCTTAGAACTCCTCGAGCTCGAC
JMSF009O16+                                     CCCTCTAAGTCGCTTAGAACTCCTCGAGCTCGAC
                      ____________________________________________________________
consensus             ATCCATTGCAAGACTAACTTCCTAGGCCCTCTAAGTCGCTTAGAACTCCTCGAGCTCGAC
 
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JMSF025P15+           CCTGCCATGAACAACACCGATACAAGCACCGCAAAATCGACACAGAAGCGAGGACGCCCC
JMSF012B21+           CCTGCCATGAACAACACCGATACAAGCACCGCAAAATCGACACAGAAGCGAGGACGCCCC
JMSF009O16+           CCTGCCATGAACAACACCGATACAAGCACCGCAAAATCGACACAGAAGCGAGGACGCCCC
                      ____________________________________________________________
consensus             CCTGCCATGAACAACACCGATACAAGCACCGCAAAATCGACACAGAAGCGAGGACGCCCC
 
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JMSF025P15+           CAGACTACGCGAATGAAGATGAACCTAAACGATGAAGCTACAACCTTTGTAACTGC    
JMSF012B21+           CAGACTACGCGAATGAAGATGAACCTAAACGATGAAGCTACAACCTTTGTAACTGC    
JMSF009O16+           CAGACTACGCGAATGAAGATGAACCTAAACGATGAAGCTACAACCTTTGTAACTGCGGCC
                      ____________________________________________________________
consensus             CAGACTACGCGAATGAAGATGAACCTAAACGATGAAGCTACAACCTTTGTAACTGCGGCC