| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF044L18 | Sequence | 629 | 002118 (10) | emb|CDP11476.1| | 7e-06 | unnamed protein product [Coffea canephora] | 128 | 007108 (5) | |||
| JMFS049H11 | Sequence | 617 | 002118 (10) | emb|CDP11476.1| | 6e-06 | unnamed protein product [Coffea canephora] | |||||
| JMFS091C10 | Sequence | 616 | 002118 (10) | emb|CDP11476.1| | 6e-06 | unnamed protein product [Coffea canephora] | |||||
| JMFS110B04 | Sequence | 620 | 002118 (10) | emb|CDP11476.1| | 6e-06 | unnamed protein product [Coffea canephora] | |||||
| JMFS140F08 | Sequence | 615 | 002118 (10) | emb|CDP11476.1| | 6e-06 | unnamed protein product [Coffea canephora] | |||||
| JMSF004E24 | Sequence | 318 | 002118 (10) | ||||||||
| JMSF009L02 | Sequence | 420 | 002118 (10) | emb|CDP11476.1| | 2e-06 | unnamed protein product [Coffea canephora] | 726 | 007108 (5) | |||
| JMSF017P09 | Sequence | 152 | 002118 (10) | 711 | 007108 (5) | ||||||
| JMSF022A17 | Sequence | 681 | 002118 (10) | emb|CDP11476.1| | 9e-06 | unnamed protein product [Coffea canephora] | 764 | 007108 (5) | |||
| JMSF024J12 | Sequence | 692 | 002118 (10) | ref|XP_010266382.1| | 107 | PREDICTED: uncharacterized protein LOC104603913 [Nelumbo nucifera] ref|XP_010266 | 719 | 007108 (5) | |||
This contig is upended
. : . : . : . : . : . :
JMSF024J12+ CCCTAAACTGCAGCGGGGCAGTATACGAGGACAAGGGA
____________________________________________________________
consensus CCCTAAACTGCAGCGGGGCAGTATACGAGGACAAGGGA
. : . : . : . : . : . :
JMSF024J12+ AAATTCCCATTTGTCGATACCCCATTGTAACAAGGAATCATAAATGCAGAAAAATTATTC
____________________________________________________________
consensus AAATTCCCATTTGTCGATACCCCATTGTAACAAGGAATCATAAATGCAGAAAAATTATTC
. : . : . : . : . : . :
JMSF024J12+ TGCAGTTGTGTATCAACTCGTGCACCCGAAGAATTCAAGACGGGTGATTGCACGTCTAAA
____________________________________________________________
consensus TGCAGTTGTGTATCAACTCGTGCACCCGAAGAATTCAAGACGGGTGATTGCACGTCTAAA
. : . : . : . : . : . :
JMSF024J12+ CACCGGTGCTGGAACCAAGAATTAAAGTCCTTTTCCATTCAATTGCAGCAATCACCAGTT
____________________________________________________________
consensus CACCGGTGCTGGAACCAAGAATTAAAGTCCTTTTCCATTCAATTGCAGCAATCACCAGTT
. : . : . : . : . : . :
JMSF024J12+ CTACGATAGTTTTTGGTACTACGATCTGCTGAACACTTCTTGAGATATTGAGAAATAATG
____________________________________________________________
consensus CTACGATAGTTTTTGGTACTACGATCTGCTGAACACTTCTTGAGATATTGAGAAATAATG
. : . : . : . : . : . :
JMSF024J12+ AAAAATGAAAAATCTTCGGCTTAACTTGAATGCAGTGGAAAGAAAATCAATCTACGTTAC
____________________________________________________________
consensus AAAAATGAAAAATCTTCGGCTTAACTTGAATGCAGTGGAAAGAAAATCAATCTACGTTAC
. : . : . : . : . : . :
JMSF024J12+ AGGTTTCAACAAGTGACGGAAATATTCAGCCTGGCAATCCTGGAGAGGTTGAAAGCATGC
____________________________________________________________
consensus AGGTTTCAACAAGTGACGGAAATATTCAGCCTGGCAATCCTGGAGAGGTTGAAAGCATGC
. : . : . : . : . : . :
JMSF024J12+ TATGACTCTAACTATTATGGTGGCACTCCCCGCAACTCCATTTTCATGTTTCAATGCCCG
____________________________________________________________
consensus TATGACTCTAACTATTATGGTGGCACTCCCCGCAACTCCATTTTCATGTTTCAATGCCCG
. : . : . : . : . : . :
JMSF024J12+ GAATCTCGTCTTACTAGCTGCTTGGCTTACCATAACTACTTGTTCCCAACCCTTCCTCAC
____________________________________________________________
consensus GAATCTCGTCTTACTAGCTGCTTGGCTTACCATAACTACTTGTTCCCAACCCTTCCTCAC
. : . : . : . : . : . :
JMSF024J12+ AAAGCAACACCGCAATCTTCCAGCAAAAAATTATCAAAGATCCCAAACACTCGCACCTTT
JMFS110B04+ AGATCCCAAACACTCGCACCTTT
JMFS140F08+ CTTT
JMSF022A17+ AGATCCCAAACACTCGCACCTTT
____________________________________________________________
consensus AAAGCAACACCGCAATCTTCCAGCAAAAAATTATCAAAGATCCCAAACACTCGCACCTTT
. : . : . : . : . : . :
JMSF024J12+ TACTCAAAACCACACAAGAAATACCCACCAGATACCGATTGGCAATGCTTAGAATTGAAT
JMFS110B04+ TACTCAAAACCACACAAGAAATACCCACCAGATACCGATTGGCAATGCTTAGAATTGAAT
JMFF044L18+ CAGATACCGATTGGCAATGCTTAGAATTGAAT
JMFS049H11+ GATACCGATTGGCAATGCTTAGAATTGAAT
JMFS091C10+ CCAGATACCGATTGGCAATGCTTAGAATTGAAT
JMFS140F08+ TACTCAAAACCACACAAGAAATACCCACCAGATACCGATTGGCAATGCTTAGAATTGAAT
JMSF022A17+ TACTCAAAACCACACAAGAAATACCCACCAGATACCGATTGGCAATGCTTAGAATTGAAT
____________________________________________________________
consensus TACTCAAAACCACACAAGAAATACCCACCAGATACCGATTGGCAATGCTTAGAATTGAAT
. : . : . : . : . : . :
JMSF024J12+ ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACT
JMFS110B04+ ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACTCTCGAG
JMFF044L18+ ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACTCTCGAG
JMFS049H11+ ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACTCTCGAG
JMFS091C10+ ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACTCTCGAG
JMFS140F08+ ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACTCTCGAG
JMSF022A17+ ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACTCTCGAG
____________________________________________________________
consensus ACTCTCAAGACTAAAGACACAAACTTGATTGGCAAGGCTTTAGAATTGAATACTCTCGAG
. : . : . : . : . : . :
JMFS110B04+ ACTAAATCTACAACACCGAATCAAAACAGACACAAACAAGCAAACGCTAGAAAGGCAATG
JMFF044L18+ ACTAAATCTACAACACCGAATCAAAACAGACACAAACAAGCAAACGCTAGAAAGGCAATG
JMFS049H11+ ACTAAATCTACAACACCGAATCAAAACAGACACAAACAAGCAAACGCTAGAAAGGCAATG
JMFS091C10+ ACTAAATCTACAACACCGAATCAAAACAGACACAAACAAGCAAACGCTAGAAAGGCAATG
JMFS140F08+ ACTAAATCTACAACACCGAATCAAAACAGACACAAACAAGCAAACGCTAGAAAGGCAATG
JMSF022A17+ ACTAAATCTACAACACCGAATCAAAACAGACACAAACAAGCAAACGCTAGAAAGGCAATG
____________________________________________________________
consensus ACTAAATCTACAACACCGAATCAAAACAGACACAAACAAGCAAACGCTAGAAAGGCAATG
. : . : . : . : . : . :
JMFS110B04+ GTTCAAAAATCTTCGAGAAAACAACAGGGAGGAAGCCGGAAAAGAAGGTAAATCTCAGCT
JMFF044L18+ GTTCAAAAATCTTCGAGAAAACAACAGGGAGGAAGCCGGAAAAGAAGGTAAATCTCAGCT
JMFS049H11+ GTTCAAAAATCTTCGAGAAAACAACAGGGAGGAAGCCGGAAAAGAAGGTAAATCTCAGCT
JMFS091C10+ GTTCAAAAATCTTCGAGAAAACAACAGGGAGGAAGCCGGAAAAGAAGGTAAATCTCAGCT
JMFS140F08+ GTTCAAAAATCTTCGAGAAAACAACAGGGAGGAAGCCGGAAAAGAAGGTAAATCTCAGCT
JMSF022A17+ GTTCAAAAATCTTCGAGAAAACAACAGGGAGGAAGCCGGAAAAGAAGGTAAATCTCAGCT
JMSF009L02+ CT
____________________________________________________________
consensus GTTCAAAAATCTTCGAGAAAACAACAGGGAGGAAGCCGGAAAAGAAGGTAAATCTCAGCT
. : . : . : . : . : . :
JMFS110B04+ AATCCAGCGGACGTAGCAAGGAATGACAATGAAACGAGTGGATCCCATTGCAAGAAGCAC
JMFF044L18+ AATCCAGCGGACGTAGCAAGGAATGACAATGAAACGAGTGGATCCCATTGCAAGAAGCAC
JMFS049H11+ AATCCAGCGGACGTAGCAAGGAATGACAATGAAACGAGTGGATCCCATTGCAAGAAGCAC
JMFS091C10+ AATCCAGCGGACGTAGCAAGGAATGACAATGAAACGAGTGGATCCCATTGCAAGAAGCAC
JMFS140F08+ AATCCAGCGGACGTAGCAAGGAATGACAATGAAACGAGTGGATCCCATTGCAAGAAGCAC
JMSF022A17+ AATCCAGCGGACGTAGCAAGGAATGACAATGAAACGAGTGGATCCCATTGCAAGAAGCAC
JMSF009L02+ AATCCAGCGGACGTAGCANGGAATGACANTGAAACGAGTGGATCCCATTGCAAGAAGCAC
____________________________________________________________
consensus AATCCAGCGGACGTAGCAAGGAATGACAATGAAACGAGTGGATCCCATTGCAAGAAGCAC
. : . : . : . : . : . :
JMFS110B04+ AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
JMFF044L18+ AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
JMFS049H11+ AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
JMFS091C10+ AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
JMFS140F08+ AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
JMSF022A17+ AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
JMSF004E24+ CTGATTACANGAGCG
JMSF009L02+ AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
____________________________________________________________
consensus AACAAACTATTCTCTAGGGGGGTGAAATGAGCAATAAATCAAGAACTGATTACAAGAGCG
. : . : . : . : . : . :
JMFS110B04+ AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
JMFF044L18+ AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
JMFS049H11+ AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
JMFS091C10+ AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
JMFS140F08+ AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
JMSF022A17+ AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
JMSF004E24+ AGGTCAATTTTNCAGAATCACACGGCAGTACAAGTTCAAGGAGATCNCTTTCNGAAACAC
JMSF009L02+ AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
____________________________________________________________
consensus AGGTCAATTTTACAGAATCACACGGCAGTACAAGTTCAAGGAGATCACTTTCCGAAACAC
. : . : . : . : . : . :
JMFS110B04+ ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
JMFF044L18+ ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
JMFS049H11+ ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
JMFS091C10+ ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
JMFS140F08+ ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
JMSF022A17+ ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
JMSF004E24+ ANCAATTGAAAGACTATACCCCCGCATAGTNTTNTTCACTCTGCAAGTTCGCCACAGNTG
JMSF009L02+ ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
____________________________________________________________
consensus ATCAATTGAAAGACTATACCACCGCATAGTGTTCTTCACTCTGCAAGTTCGCCACAGCTG
. : . : . : . : . : . :
JMFS110B04+ TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
JMFF044L18+ TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
JMFS049H11+ TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
JMFS091C10+ TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
JMFS140F08+ TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
JMSF022A17+ TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
JMSF004E24+ TTGCTGNNTGAGTTTNTTAATCTAGTCTAAGCTCCANNGAATGAAGGTCCAAATCAGGCA
JMSF017P09+ AAGCTCCANTGAATGAAGGTCCAAATCAGGCA
JMSF009L02+ TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
____________________________________________________________
consensus TTGCTGGTTGAGTTTCTTAATCTAGTCTAAGCTCCAGTGAATGAAGGTCCAAATCAGGCA
. : . : . : . : . : . :
JMFS110B04+ CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAAGAGA
JMFF044L18+ CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAA--GAGAGAGATAG
JMFS049H11+ CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAA--GAGAGAGATAG
JMFS091C10+ CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAA--GAGAGAGATAG
JMFS140F08+ CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAAGAGAGAGATAGAG
JMSF022A17+ CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAA--GAGAGAGATAG
JMSF004E24+ CTCAGATTTGCTTATCNTCNGAAACCCAGAAAAACACAGAGATTCAAGAGAGAGAGAGAG
JMSF017P09+ CTCAGATTTGNTTATCNTCNGAAACCCAGAAAAACACAGAGATTCAAGAGAGAGAGAGAG
JMSF009L02+ CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAA--GAGAGAGATAG
____________________________________________________________
consensus CTCAGATTTGCTTATCCTCAGAAACCCAGAAAAACACAGAGATTCAA--GAGAGAGATAG
. : . : . : . : . : . :
JMFF044L18+ AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGAGAAAGAGCAGAGTC
JMFS049H11+ AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGAGAAA
JMFS091C10+ AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGA
JMFS140F08+ AGAGAGAGAGA
JMSF022A17+ AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGAGAAAGAGCAGAGTCC
JMSF004E24+ AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGAGAAAGAGCAGAGTCC
JMSF017P09+ AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGAGAAAGAGCAGAGTCC
JMSF009L02+ AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGAGAAAGAGCAGAGTCC
____________________________________________________________
consensus AGAGAGAGAGAGAGAGAGGGCGCGTGATGCTGATTTGCAGAGAGAGAAAGAGCAGAGTCC