Contig 002115:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034A17Sequence507002115 (5)ref|XP_011081744.1|1e-32PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]747006994 (5)ref|XP_006364729.1|3e-82PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]
JMFF034L24Sequence605002115 (5)ref|XP_011081744.1|4e-50PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]742006994 (5)ref|XP_006364729.1|1e-76PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]
JMFF049H07Sequence642002115 (5)ref|XP_011081744.1|1e-53PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]641006994 (5)ref|XP_009600836.1|3e-56PREDICTED: receptor-like protein kinase 5 [Nicotiana tomentosiformis]
JMSF009D03Sequence300002115 (5)ref|XP_011081744.1|3e-05PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]791006994 (5)ref|XP_006364729.1|4e-104PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]
JMSF029A13Sequence596002115 (5)ref|XP_011081744.1|1e-46PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]722006994 (5)ref|XP_006364729.1|3e-97PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFF034L24+                                                    GTTGTAAAAATTTCCTATA
JMFF049H07+                   CAAAGAATTCATGGACAAATCTAAGTAGCTAAGGTTGTAAAAATTTCCTATA
                      ____________________________________________________________
consensus                     CAAAGAATTCATGGACAAATCTAAGTAGCTAAGGTTGTAAAAATTTCCTATA
 
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JMFF034L24+           TCATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
JMFF049H07+           TCATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
JMSF029A13+             ATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
                      ____________________________________________________________
consensus             TCATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
 
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JMFF034L24+           GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
JMFF049H07+           GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
JMFF034A17+                                    CGAACAACATGTTGCCTCGAAGATTTAAACTACGC
JMSF029A13+           GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
                      ____________________________________________________________
consensus             GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
 
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JMFF034L24+           AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
JMFF049H07+           AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
JMFF034A17+           AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
JMSF029A13+           AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
                      ____________________________________________________________
consensus             AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
 
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JMFF034L24+           TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
JMFF049H07+           TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
JMFF034A17+           TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
JMSF029A13+           TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
                      ____________________________________________________________
consensus             TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
 
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JMFF034L24+           TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
JMFF049H07+           TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
JMFF034A17+           TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
JMSF029A13+           TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
                      ____________________________________________________________
consensus             TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
 
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JMFF034L24+           AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
JMFF049H07+           AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
JMFF034A17+           AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
JMSF029A13+           AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
                      ____________________________________________________________
consensus             AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
 
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JMFF034L24+           CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMFF049H07+           CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMFF034A17+           CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMSF029A13+           CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMSF009D03+           CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
                      ____________________________________________________________
consensus             CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
 
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JMFF034L24+           AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMFF049H07+           AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMFF034A17+           AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMSF029A13+           AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMSF009D03+           AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
                      ____________________________________________________________
consensus             AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
 
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JMFF034L24+           GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMFF049H07+           GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMFF034A17+           GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMSF029A13+           GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMSF009D03+           GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
                      ____________________________________________________________
consensus             GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
 
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JMFF034L24+           AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAAT              
JMFF049H07+           AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATA          
JMFF034A17+           AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATA          
JMSF029A13+           AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATAAG        
JMSF009D03+           AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATAAGATGGTGAG
                      ____________________________________________________________
consensus             AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATAAGATGGTGAG
 
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JMSF009D03+           GATCTTGCTGCTCTCATCTATTATATTATTGTATTGCTTAATGTGAACAACAAAGTTCCC
                      ____________________________________________________________
consensus             GATCTTGCTGCTCTCATCTATTATATTATTGTATTGCTTAATGTGAACAACAAAGTTCCC