Contig 002114:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010J20Sequence644002114 (2)ref|XP_004238961.1|3e-76PREDICTED: methionine aminopeptidase 1B, chloroplastic [Solanum lycopersicum]754009638 (2)gb|EYU29943.1|3e-80hypothetical protein MIMGU_mgv1a008750mg [Erythranthe guttata] gb|EYU29944.1| hy
JMSF009C17Sequence248002114 (2)770009638 (2)ref|XP_009796839.1|4e-101PREDICTED: methionine aminopeptidase 1B, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF010J20+                         GGCGAGAGTCAGGTATTCCATGGCACATACACTCATTGACTGATGT
                      ____________________________________________________________
consensus                           GGCGAGAGTCAGGTATTCCATGGCACATACACTCATTGACTGATGT
 
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JMFF010J20+           ACACACACTTTTAGGAAAACCCCCATAGCCCAGAGGTGAAGGGTAAGCACCAGCATCAAT
                      ____________________________________________________________
consensus             ACACACACTTTTAGGAAAACCCCCATAGCCCAGAGGTGAAGGGTAAGCACCAGCATCAAT
 
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JMFF010J20+           AATCATTTGGTGTACGGCTTTATCTATTTCATTTGTCGTTACTGATGGCCTAACCAATGT
                      ____________________________________________________________
consensus             AATCATTTGGTGTACGGCTTTATCTATTTCATTTGTCGTTACTGATGGCCTAACCAATGT
 
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JMFF010J20+           TCCTGCATACTCTAGCACCCGGGCAGCAAGCTCACCTGCTGCTCTCATATGAGCAATTCC
                      ____________________________________________________________
consensus             TCCTGCATACTCTAGCACCCGGGCAGCAAGCTCACCTGCTGCTCTCATATGAGCAATTCC
 
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JMFF010J20+           TTCAGCATCATGAATTTGATGTTCACTTGCGATCTCTGGCAACTCTCTTGAGCCTACATA
                      ____________________________________________________________
consensus             TTCAGCATCATGAATTTGATGTTCACTTGCGATCTCTGGCAACTCTCTTGAGCCTACATA
 
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JMFF010J20+           AGGGGGCTTCAGTATGTGATCTGGCACAGGAAGCCGTGGTGATACCCGCCCTCGCTTTAA
                      ____________________________________________________________
consensus             AGGGGGCTTCAGTATGTGATCTGGCACAGGAAGCCGTGGTGATACCCGCCCTCGCTTTAA
 
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JMFF010J20+           AGGCAGCCTTCTCTTAGGATTATTAGAAGAACCAAGAAGTTCACGCTCCCTTCTAATTCT
JMSF009C17+                                                               CTAATTCT
                      ____________________________________________________________
consensus             AGGCAGCCTTCTCTTAGGATTATTAGAAGAACCAAGAAGTTCACGCTCCCTTCTAATTCT
 
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JMFF010J20+           TATGGCCTCTTCCAAACCCGATATTCTTTTCGCAGATATCACAAACCTCTTATGTAAGTT
JMSF009C17+           TATGGCCTCTTCCAAACCCGATATTCTTTTCGCAGATATCACAAACCTCTTATGTAAGTT
                      ____________________________________________________________
consensus             TATGGCCTCTTCCAAACCCGATATTCTTTTCGCAGATATCACAAACCTCTTATGTAAGTT
 
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JMFF010J20+           GGAATTTTTATCAGAGGGAGAAAGGTGGAGGGAAGTAAGGTGGCTGCC-GAGAGCGAAGA
JMSF009C17+           GGAATTTTTATCAGAGGGAGAAAGGTGGAGGGAAGTAAGGTGGCTGCCGGAGAGCGAAGA
                      ____________________________________________________________
consensus             GGAATTTTTATCAGAGGGAGAAAGGTGGAGGGAAGTAAGGTGGCTGCCGGAGAGCGAAGA
 
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JMFF010J20+           AGATGACGACAGGTGCTTGACGTCATCATAAAAATGCGTCGAAGATTGCAGTGGAGAAGG
JMSF009C17+           AGATGACGACAGGTGCTTGACGTCATCATAAAAATGCGTCGAAGATTGCAGTGGAGAAGG
                      ____________________________________________________________
consensus             AGATGACGACAGGTGCTTGACGTCATCATAAAAATGCGTCGAAGATTGCAGTGGAGAAGG
 
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JMFF010J20+           TGCTGCTGCACGGGCAAGGGAGGAGAGTGAACTCAGCAAAGCCATTTCCGCTGGGAGA  
JMSF009C17+           TGCTGCTGCACGGGCAAGGGAGGAGAGTGAACTCAGCAAAGCCATTTCCGCTGGGAGAAC
                      ____________________________________________________________
consensus             TGCTGCTGCACGGGCAAGGGAGGAGAGTGAACTCAGCAAAGCCATTTCCGCTGGGAGAAC