Contig 002113:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006M21Sequence586002113 (5)ref|XP_011085259.1|2e-77PREDICTED: uncharacterized protein ycf23-like [Sesamum indicum]824002113 (5)ref|XP_009596104.1|4e-118PREDICTED: uncharacterized protein ycf23-like [Nicotiana tomentosiformis]
JMSF009B19Sequence324002113 (5)ref|XP_011085259.1|8e-25PREDICTED: uncharacterized protein ycf23-like [Sesamum indicum]
JMSF027O17Sequence635000698 (4)ref|XP_009771569.1|2e-102PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris]628002113 (5)ref|XP_009596104.1|1e-95PREDICTED: uncharacterized protein ycf23-like [Nicotiana tomentosiformis]
JMSF039I13Sequence640002113 (5)ref|XP_011085259.1|4e-91PREDICTED: uncharacterized protein ycf23-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF006M21- GCGAGCTCG
                      ____________________________________________________________
consensus GCGAGCTCG
 
. : . : . : . : . : . :
rJMSF027O17- GACAGGTGTTGCCTAGGTGACGCCTTAACAACAAT
rJMFF006M21- TTAGGCGTCTGGTCTCCACTGACCCGACAGGTGTTGCCTAGGTGACGCCTTAACAACAAT
                      ____________________________________________________________
consensus TTAGGCGTCTGGTCTCCACTGACCCGACAGGTGTTGCCTAGGTGACGCCTTAACAACAAT
 
. : . : . : . : . : . :
rJMSF027O17- GACAATTTCACTACTATCCCCAGTAGCCAAAACATCATACTCATAATCTAAATCTGCTCT
rJMFF006M21- GACAATTTCACTACTATCCCCAGTAGCCAAAACATCATACTCATAATCTAAATCTGCTCT
                      ____________________________________________________________
consensus GACAATTTCACTACTATCCCCAGTAGCCAAAACATCATACTCATAATCTAAATCTGCTCT
 
. : . : . : . : . : . :
rJMSF027O17- CTTCCAAAACATCCTGCTTCTTGTTGGACAGCCCAATTGAATCAGCTATGGATTTTACTT
rJMFF006M21- CTTCCAAAACATCCTGCTTCTTGTTGGACAGCCCAATTGAATCAGCTATGGATTTTACTT
                      ____________________________________________________________
consensus CTTCCAAAACATCCTGCTTCTTGTTGGACAGCCCAATTGAATCAGCTATGGATTTTACTT
 
. : . : . : . : . : . :
rJMSF027O17- GAGCAATCATCGCGATCGTATCATTGAGTTTGTTAATGGCTGAGCCGACGCCCACGCCAG
rJMFF006M21- GAGCAATCATCGCGATCGTATCATTGAGTTTGTTAATGGCTGAGCCGACGCCCACGCCAG
                      ____________________________________________________________
consensus GAGCAATCATCGCGATCGTATCATTGAGTTTGTTAATGGCTGAGCCGACGCCCACGCCAG
 
. : . : . : . : . : . :
rJMSF027O17- CAGCTCCGGCTGTGATTGCCATTGGCGCTGTGACTGCACTTAGTCCAGATGAACACATGA
rJMFF006M21- CAGCTCCGGCTGTGATTGCCATTGGCGCTGTGACTGCACTTAGTCCAGATGAACACATGA
                      ____________________________________________________________
consensus CAGCTCCGGCTGTGATTGCCATTGGCGCTGTGACTGCACTTAGTCCAGATGAACACATGA
 
. : . : . : . : . : . :
rJMSF027O17- CGGGAATCTTCACTGCCCGTGAAATTGCATATGCTGCTGCTAGCGTTGGGGTCGCTTTTT
rJMFF006M21- CGGGAATCTTCACTGCCCGTGAAATTGCATATGCTGCTGCTAGCGTTGGGGTCGCTTTTT
                      ____________________________________________________________
consensus CGGGAATCTTCACTGCCCGTGAAATTGCATATGCTGCTGCTAGCGTTGGGGTCGCTTTTT
 
. : . : . : . : . : . :
rJMSF027O17- CTATTAAGCCCAAGATGCCAGGTTTCAAAGGATTAGAGCACTTTCCTCCTTCTGTTTGGA
rJMFF006M21- CTATTAAGCCCAAGATGCCAGGTTTCAAGGGATTAGAGCACTTTCCTCCTTCTGTTTGGA
                      ____________________________________________________________
consensus CTATTAAGCCCAAGATGCCAGGTTTCAAGGGATTAGAGCACTTTCCTCCTTCTGTTTGGA
 
. : . : . : . : . : . :
rJMSF027O17- TGATATCAGCCCCTTCTTGTTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
rJMFF006M21- TGATATCAGCCCCTTCTTGTTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
JMSF039I13+ TTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
                      ____________________________________________________________
consensus TGATATCAGCCCCTTCTTGTTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
 
. : . : . : . : . : . :
rJMSF027O17- ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
rJMFF006M21- ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
JMFF006M21+ CAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
JMSF039I13+ ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
                      ____________________________________________________________
consensus ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
 
. : . : . : . : . : . :
rJMSF027O17- TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
rJMFF006M21- TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
JMFF006M21+ TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
JMSF039I13+ TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
                      ____________________________________________________________
consensus TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
 
. : . : . : . : . : . :
rJMSF027O17- TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCC
rJMFF006M21- TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
JMFF006M21+ TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
JMSF039I13+ TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
                      ____________________________________________________________
consensus TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
 
. : . : . : . : . : . :
rJMFF006M21- CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
JMFF006M21+ CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
JMSF039I13+ CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
                      ____________________________________________________________
consensus CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
 
. : . : . : . : . : . :
rJMFF006M21- CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
JMFF006M21+ CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
JMSF039I13+ CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
JMSF009B19+ TGCAGCAGTAACAACAGCAGCAA
                      ____________________________________________________________
consensus CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
 
. : . : . : . : . : . :
rJMFF006M21- CACTTTCTTTGGTTAAGATTTTGCAACCCTGAAAT
JMFF006M21+ CACTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
JMSF039I13+ CATTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
JMSF009B19+ CATTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
                      ____________________________________________________________
consensus CACTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
 
. : . : . : . : . : . :
JMFF006M21+ AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
JMSF039I13+ AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
JMSF009B19+ AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
                      ____________________________________________________________
consensus AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
 
. : . : . : . : . : . :
JMFF006M21+ TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
JMSF039I13+ TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
JMSF009B19+ TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
                      ____________________________________________________________
consensus TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
 
. : . : . : . : . : . :
JMFF006M21+ GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
JMSF039I13+ GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
JMSF009B19+ GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
                      ____________________________________________________________
consensus GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
 
. : . : . : . : . : . :
JMFF006M21+ GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATC
JMSF039I13+ GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATC
JMSF009B19+ GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATCC
                      ____________________________________________________________
consensus GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATCC