Contig 002113:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006M21Sequence586002113 (5)ref|XP_011085259.1|2e-77PREDICTED: uncharacterized protein ycf23-like [Sesamum indicum]824002113 (5)ref|XP_009596104.1|4e-118PREDICTED: uncharacterized protein ycf23-like [Nicotiana tomentosiformis]
JMSF009B19Sequence324002113 (5)ref|XP_011085259.1|8e-25PREDICTED: uncharacterized protein ycf23-like [Sesamum indicum]
JMSF027O17Sequence635000698 (4)ref|XP_009771569.1|2e-102PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Nicotiana sylvestris]628002113 (5)ref|XP_009596104.1|1e-95PREDICTED: uncharacterized protein ycf23-like [Nicotiana tomentosiformis]
JMSF039I13Sequence640002113 (5)ref|XP_011085259.1|4e-91PREDICTED: uncharacterized protein ycf23-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF006M21-                                                             GCGAGCTCG
                      ____________________________________________________________
consensus                                                                GCGAGCTCG
 
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rJMSF027O17-                                   GACAGGTGTTGCCTAGGTGACGCCTTAACAACAAT
rJMFF006M21-          TTAGGCGTCTGGTCTCCACTGACCCGACAGGTGTTGCCTAGGTGACGCCTTAACAACAAT
                      ____________________________________________________________
consensus             TTAGGCGTCTGGTCTCCACTGACCCGACAGGTGTTGCCTAGGTGACGCCTTAACAACAAT
 
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rJMSF027O17-          GACAATTTCACTACTATCCCCAGTAGCCAAAACATCATACTCATAATCTAAATCTGCTCT
rJMFF006M21-          GACAATTTCACTACTATCCCCAGTAGCCAAAACATCATACTCATAATCTAAATCTGCTCT
                      ____________________________________________________________
consensus             GACAATTTCACTACTATCCCCAGTAGCCAAAACATCATACTCATAATCTAAATCTGCTCT
 
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rJMSF027O17-          CTTCCAAAACATCCTGCTTCTTGTTGGACAGCCCAATTGAATCAGCTATGGATTTTACTT
rJMFF006M21-          CTTCCAAAACATCCTGCTTCTTGTTGGACAGCCCAATTGAATCAGCTATGGATTTTACTT
                      ____________________________________________________________
consensus             CTTCCAAAACATCCTGCTTCTTGTTGGACAGCCCAATTGAATCAGCTATGGATTTTACTT
 
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rJMSF027O17-          GAGCAATCATCGCGATCGTATCATTGAGTTTGTTAATGGCTGAGCCGACGCCCACGCCAG
rJMFF006M21-          GAGCAATCATCGCGATCGTATCATTGAGTTTGTTAATGGCTGAGCCGACGCCCACGCCAG
                      ____________________________________________________________
consensus             GAGCAATCATCGCGATCGTATCATTGAGTTTGTTAATGGCTGAGCCGACGCCCACGCCAG
 
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rJMSF027O17-          CAGCTCCGGCTGTGATTGCCATTGGCGCTGTGACTGCACTTAGTCCAGATGAACACATGA
rJMFF006M21-          CAGCTCCGGCTGTGATTGCCATTGGCGCTGTGACTGCACTTAGTCCAGATGAACACATGA
                      ____________________________________________________________
consensus             CAGCTCCGGCTGTGATTGCCATTGGCGCTGTGACTGCACTTAGTCCAGATGAACACATGA
 
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rJMSF027O17-          CGGGAATCTTCACTGCCCGTGAAATTGCATATGCTGCTGCTAGCGTTGGGGTCGCTTTTT
rJMFF006M21-          CGGGAATCTTCACTGCCCGTGAAATTGCATATGCTGCTGCTAGCGTTGGGGTCGCTTTTT
                      ____________________________________________________________
consensus             CGGGAATCTTCACTGCCCGTGAAATTGCATATGCTGCTGCTAGCGTTGGGGTCGCTTTTT
 
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rJMSF027O17-          CTATTAAGCCCAAGATGCCAGGTTTCAAAGGATTAGAGCACTTTCCTCCTTCTGTTTGGA
rJMFF006M21-          CTATTAAGCCCAAGATGCCAGGTTTCAAGGGATTAGAGCACTTTCCTCCTTCTGTTTGGA
                      ____________________________________________________________
consensus             CTATTAAGCCCAAGATGCCAGGTTTCAAGGGATTAGAGCACTTTCCTCCTTCTGTTTGGA
 
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rJMSF027O17-          TGATATCAGCCCCTTCTTGTTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
rJMFF006M21-          TGATATCAGCCCCTTCTTGTTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
JMSF039I13+                              TTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
                      ____________________________________________________________
consensus             TGATATCAGCCCCTTCTTGTTCCAGCATCTCGGCTAGTTTAATCTGATCGGGAAGGCTCA
 
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rJMSF027O17-          ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
rJMFF006M21-          ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
JMFF006M21+                       CAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
JMSF039I13+           ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
                      ____________________________________________________________
consensus             ACGTGTGAGGCACAGTGACTGACAATGTGATGGATGGAAGAATTCTCTTAGTCTCCTTTG
 
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rJMSF027O17-          TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
rJMFF006M21-          TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
JMFF006M21+           TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
JMSF039I13+           TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
                      ____________________________________________________________
consensus             TCAGATTCAGAATCTGCTCCGGGGAGAATATCAGTCCCATCTCATAGAATGAGTCATAGT
 
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rJMSF027O17-          TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCC       
rJMFF006M21-          TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
JMFF006M21+           TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
JMSF039I13+           TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
                      ____________________________________________________________
consensus             TTCCAATCTCCACCATCAAGGCTCCTGCTTCTACTGCAGCCGGGAATGCTGCCGGATCCA
 
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rJMFF006M21-          CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
JMFF006M21+           CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
JMSF039I13+           CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
                      ____________________________________________________________
consensus             CAGATGAGACACAAACCGGAAGAGAAGTCAGGGCAGTAGCAAGTTTCACCAGTTCTGGGT
 
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rJMFF006M21-          CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
JMFF006M21+           CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
JMSF039I13+           CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
JMSF009B19+                                                TGCAGCAGTAACAACAGCAGCAA
                      ____________________________________________________________
consensus             CACAAGCTATGTCCACATGAGTTGCTCCTCCCTTATCTGCAGCAGTAACAACAGCAGCAA
 
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rJMFF006M21-          CACTTTCTTTGGTTAAGATTTTGCAACCCTGAAAT                         
JMFF006M21+           CACTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
JMSF039I13+           CATTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
JMSF009B19+           CATTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
                      ____________________________________________________________
consensus             CACTTTCTTT-GTTAAGATTTTGCAACCCTGAAATAATCTTTAGGGCTCTTTTCTGATGA
 
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JMFF006M21+           AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
JMSF039I13+           AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
JMSF009B19+           AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
                      ____________________________________________________________
consensus             AACTCTTTCAAGACTGCTTCTTTGGTGGATGAGAGCAAAGCCCTTGGTGGGGTTAAGGGC
 
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JMFF006M21+           TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
JMSF039I13+           TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
JMSF009B19+           TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
                      ____________________________________________________________
consensus             TTTCTCCTCCTACCAAATGAAAGGTGCTTTGGAAGAGGAACAGAGTCTCCCTTTAGAAGT
 
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JMFF006M21+           GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
JMSF039I13+           GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
JMSF009B19+           GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
                      ____________________________________________________________
consensus             GGGTTTGTGCTTGGTTTCAAGATTACAGTATGATTTTTTGAGGAAATTAAGGTGCAAAAT
 
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JMFF006M21+           GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATC 
JMSF039I13+           GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATC 
JMSF009B19+           GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATCC
                      ____________________________________________________________
consensus             GAAGAACTCATTATTCCTCTCTCTGCAGCTTTGGATTATGAACTTGTTTTGAGTCTATCC