Contig 002111:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS081C11Sequence616002111 (3)ref|XP_009594028.1|4e-25PREDICTED: K(+) efflux antiporter 3, chloroplastic-like [Nicotiana tomentosifor
JMFS145H08Sequence613002111 (3)ref|XP_009594028.1|1e-10PREDICTED: K(+) efflux antiporter 3, chloroplastic-like [Nicotiana tomentosifor
JMSF009A24Sequence272002111 (3)738017082ref|XP_011002854.1|2e-35PREDICTED: K(+) efflux antiporter 3, chloroplastic [Populus euphratica]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+                                     GATGAGGCCAAACTGATTGAGCACTACTCCCGCA
                      ____________________________________________________________
consensus                                       GATGAGGCCAAACTGATTGAGCACTACTCCCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           AAGAAGAAGCCAAGTATAGGACTGGCTCTGATAGTTTTGAAGGCAGGAACAACTAATACA
JMFS145H08+                                        GATAGTTTTGAAGGCAGGAACAACTAATACA
                      ____________________________________________________________
consensus             AAGAAGAAGCCAAGTATAGGACTGGCTCTGATAGTTTTGAAGGCAGGAACAACTAATACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           GTCACGGCTAAGAATGTCAAAGTATCCATCCCTAGGTCATTGATGACATCAACAGCAGCT
JMFS145H08+           GTCACGGCTAAGAATGTCAAAGTATCCATCCCTAGGTCATTGATGACATCAACAGCAGCT
                      ____________________________________________________________
consensus             GTCACGGCTAAGAATGTCAAAGTATCCATCCCTAGGTCATTGATGACATCAACAGCAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           GCAACATCAACTGATGAGTACATTTGAAGTCTGTACCTTTGAGATGGCACATTCTTGAAG
JMFS145H08+           GCAACATCAACTGATGAGTACATTTGAAGTCTGTACCTTTGAGATGGCACATTCTTGAAG
                      ____________________________________________________________
consensus             GCAACATCAACTGATGAGTACATTTGAAGTCTGTACCTTTGAGATGGCACATTCTTGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           AAGAAAAATCTTTTCCCATTGAAAGTAGGTGTGGTTTTGCATCCATCATTTGTTATAAAA
JMFS145H08+           AAGAAAAATCTTTTCCCATTGAAAGTAGGTGTGGTTTTGCATCCATCATTTGTTATAAAA
                      ____________________________________________________________
consensus             AAGAAAAATCTTTTCCCATTGAAAGTAGGTGTGGTTTTGCATCCATCATTTGTTATAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           GAATGGGTAGTCTTCTGATACACAGAGAGTGGTGATAAATGTTGCACTCTATTATAACAA
JMFS145H08+           GAATGGGTAGTCTTCTGATACACAGAGAGTGGTGATAAATGTTGCACTCTATTATAACAA
                      ____________________________________________________________
consensus             GAATGGGTAGTCTTCTGATACACAGAGAGTGGTGATAAATGTTGCACTCTATTATAACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           AACAAGGATTTTGAATAATGCCGACAAAAACGAGGTGCAGGAAAACTAGCCGAAAGTGTG
JMFS145H08+           AACAAGGATTTTGAATAATGCCGACAAAAACGAGGTGCAGGAAAACTAGCCGAAAGTGTG
                      ____________________________________________________________
consensus             AACAAGGATTTTGAATAATGCCGACAAAAACGAGGTGCAGGAAAACTAGCCGAAAGTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           CTTGCTTGAGTAACAACACATCCCTTGGGACCATGAGAGTAGGCAACCAAATCCAACATA
JMFS145H08+           CTTGCTTGAGTAACAACACATCCCTTGGGACCATGAGAGTAGGCAACCAAATCCAACATA
JMSF009A24+                                       GACCATGAGAGTAGGCAACCAAATCCAACATA
                      ____________________________________________________________
consensus             CTTGCTTGAGTAACAACACATCCCTTGGGACCATGAGAGTAGGCAACCAAATCCAACATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           GTTTACTTCCAAGAACCTTGGCAACTTTACTGGGTGGTAATCTGAGAATCCGAAAATAAT
JMFS145H08+           GTTTACTTCCAAGAACCTTGGCAACTTTACTGGGTGGTAATCTGAGAATCCGAAAATAAT
JMSF009A24+           GTTTACTTCCAAGAACCTTGGCAACTTTACTGGGTGGTAATCTGAGAATCCGAAAATAAT
                      ____________________________________________________________
consensus             GTTTACTTCCAAGAACCTTGGCAACTTTACTGGGTGGTAATCTGAGAATCCGAAAATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           GAAAAACATGAACCAAATGTAAGCAAACACTAGTGGGCAGAATTTCGAGGCTTGATATTC
JMFS145H08+           GAAAAACATGAACCAAATGTAAGCAAACACTAGTGGGCAGAATTTCGAGGCTTGATATTC
JMSF009A24+           GAAAAACATGAACCAAATGTAAGCAAACACTAGTGGGCAGAATTTCGAGGCTTGATATTC
                      ____________________________________________________________
consensus             GAAAAACATGAACCAAATGTAAGCAAACACTAGTGGGCAGAATTTCGAGGCTTGATATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS081C11+           TTGTTCGTTTTGTAGTTTATTTTAATGGTGGGGTTTTCTCCT                  
JMFS145H08+           TTGTTCGTTTTGTAGTTTATTTTAATGGTGGGGTTTTCTCCTACGGGTTCAAAACAGGGA
JMSF009A24+           TTGTTCGTTTTGTAGTTTATTTTAATGGTGGGGTTTTCTCCTACGGGTTCAAAACAGGGA
                      ____________________________________________________________
consensus             TTGTTCGTTTTGTAGTTTATTTTAATGGTGGGGTTTTCTCCTACGGGTTCAAAACAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS145H08+           TAAAGAAGAGGTCGACAAGGCGCCACAAGTATATAAAATTGT                  
JMSF009A24+           TAAAGAAGAGGTCGACAAGGCGCCACAAGTATATAAAATTGTGACTGGGAAGAAAAAGCC
                      ____________________________________________________________
consensus             TAAAGAAGAGGTCGACAAGGCGCCACAAGTATATAAAATTGTGACTGGGAAGAAAAAGCC