Contig 002108:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008I11Sequence326002108 (2)gb|KCW56669.1|3e-18hypothetical protein EUGRSUZ_I02369 [Eucalyptus grandis]762013893 (2)ref|XP_011100947.1|277PREDICTED: UPF0183 protein At3g51130 isoform X1 [Sesamum indicum]
JMSF049E04Sequence705002108 (2)ref|XP_009599857.1|434PREDICTED: UPF0183 protein At3g51130 isoform X3 [Nicotiana tomentosiformis]778013893 (2)ref|XP_011100947.1|327PREDICTED: UPF0183 protein At3g51130 isoform X1 [Sesamum indicum]

Alignment

This contig is upended


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JMSF049E04+                                                                     GA
                      ____________________________________________________________
consensus                                                                       GA
 
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JMSF049E04+           ATGTGTTGGCCACCGACCGTAAACCATAATTCTTCCCCTAGCTTAACACGCACTTCCTCC
                      ____________________________________________________________
consensus             ATGTGTTGGCCACCGACCGTAAACCATAATTCTTCCCCTAGCTTAACACGCACTTCCTCC
 
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JMSF049E04+           ATATAAAGGCTTCCAGCGGGCAAAGGAGGAGCACAAGCCTTGTCCATCGAGGACCCCACA
                      ____________________________________________________________
consensus             ATATAAAGGCTTCCAGCGGGCAAAGGAGGAGCACAAGCCTTGTCCATCGAGGACCCCACA
 
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JMSF049E04+           CCGACTTTACTGCCCGTAGAACTATCGTATATCGAGACACGACATGTAACAGGAGTTGTG
                      ____________________________________________________________
consensus             CCGACTTTACTGCCCGTAGAACTATCGTATATCGAGACACGACATGTAACAGGAGTTGTG
 
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JMSF049E04+           CCATCAGGGAATTCCAGAGGCAGTTCCGCTTCTCCATCACGACAACATTCTGTATACTGT
                      ____________________________________________________________
consensus             CCATCAGGGAATTCCAGAGGCAGTTCCGCTTCTCCATCACGACAACATTCTGTATACTGT
 
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JMSF049E04+           GAGGGAATTGGGAAAGCAAACGACAACCCCGGGTAAAATAACGTGTAAACACCTCTGTCT
                      ____________________________________________________________
consensus             GAGGGAATTGGGAAAGCAAACGACAACCCCGGGTAAAATAACGTGTAAACACCTCTGTCT
 
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JMSF049E04+           TTGTCATACTTGCCAGGATATGTCGGACCAAAAAGAGCATAAACGGCAACAAAAGTGGCT
                      ____________________________________________________________
consensus             TTGTCATACTTGCCAGGATATGTCGGACCAAAAAGAGCATAAACGGCAACAAAAGTGGCT
 
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JMSF049E04+           AGGGTGGATGGTCCTCCAATCAAAGAGGTAGCATAACGCATTTGAAGCCGTTTCACATCA
                      ____________________________________________________________
consensus             AGGGTGGATGGTCCTCCAATCAAAGAGGTAGCATAACGCATTTGAAGCCGTTTCACATCA
 
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JMSF049E04+           AAAATTTCAATAAGACGCAGTCTCTGTGACCAAGGATCAAAGCGAAGATGAAAGCCATGG
                      ____________________________________________________________
consensus             AAAATTTCAATAAGACGCAGTCTCTGTGACCAAGGATCAAAGCGAAGATGAAAGCCATGG
 
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JMSF049E04+           TCCGGGAAGCTGATAACAATATCAAGTTTTAAAGGATCCTCATCGTAATGCTTCACGTGA
                      ____________________________________________________________
consensus             TCCGGGAAGCTGATAACAATATCAAGTTTTAAAGGATCCTCATCGTAATGCTTCACGTGA
 
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JMSF049E04+           ACAACATCATAAATGTTAGGCTTCTGCTCTATTTGAGCAAAGGCCTCGCAAATCGGCATT
JMSF008I11+                                             GAGCAAAGGCCTCGCAAATCGGCATT
                      ____________________________________________________________
consensus             ACAACATCATAAATGTTAGGCTTCTGCTCTATTTGAGCAAAGGCCTCGCAAATCGGCATT
 
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JMSF049E04+           CCGAGAGAGAAGGGACCGATGCCGGCGCCGGGGCGGAGATCGAAAACGATGGCGCCCATG
JMSF008I11+           CCGAGAGAGAAGGGACCGATGCCGGCGCCGGGGCGGAGATCGAAAACGATGGCGCCCATG
                      ____________________________________________________________
consensus             CCGAGAGAGAAGGGACCGATGCCGGCGCCGGGGCGGAGATCGAAAACGATGGCGCCCATG
 
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JMSF049E04+           GCTGTGCCTTCGCACCTGCGTCTCGGTCTCTGCTGCATCATT                  
JMSF008I11+           GCTGTGCCTTCGCACCTGCGTCTCGGTCTCTGCTGCATCATTATGAAGGACTTATTGTTA
                      ____________________________________________________________
consensus             GCTGTGCCTTCGCACCTGCGTCTCGGTCTCTGCTGCATCATTATGAAGGACTTATTGTTA
 
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JMSF008I11+           TTATTACAAAAAATACATATATCGATTGAATTGCGATAGCTGATAGTGATGTCCAATTGA
                      ____________________________________________________________
consensus             TTATTACAAAAAATACATATATCGATTGAATTGCGATAGCTGATAGTGATGTCCAATTGA
 
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JMSF008I11+           ATTTGAGGATGAAGAGATTTTTGCCACTCTTTGGCAGACGATTATAGGTGAGATGAGATG
                      ____________________________________________________________
consensus             ATTTGAGGATGAAGAGATTTTTGCCACTCTTTGGCAGACGATTATAGGTGAGATGAGATG
 
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JMSF008I11+           AGATTGATTGCTTCAAGTAGACGGAGACGATGTGGTTGGAATTGGGAAAGGCAGAAAGCC
                      ____________________________________________________________
consensus             AGATTGATTGCTTCAAGTAGACGGAGACGATGTGGTTGGAATTGGGAAAGGCAGAAAGCC