Contig 002106:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS047A07+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMFS047A07+           CCATTGGTTTTGGCATAGTGAAATGCATACTCTGCAACCCTCAAACTTGCTTGACGTGTT
JMFS089C03+                    TTGGCATAGTGAAATGCATACTCTGCAACCCTCAAACTTGCTTGACGTGTT
                      ____________________________________________________________
consensus             CCATTGGTTTTGGCATAGTGAAATGCATACTCTGCAACCCTCAAACTTGCTTGACGTGTT
 
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JMFS047A07+           ATGATCTTTAGGCTTTCAACCACCCCTCTCACCACTTGATGTTCAAGACCACTGTACTCT
JMFS089C03+           ATGATCTTTAGGCTTTCAACCACCCCTCTCACCACTTGATGTTCAAGACCACTGTACTCT
                      ____________________________________________________________
consensus             ATGATCTTTAGGCTTTCAACCACCCCTCTCACCACTTGATGTTCAAGACCACTGTACTCT
 
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JMFS047A07+           CCTTCGGTATTTTCACGAATAGTGATAAGATTCACATCATCATACCGAGTCTTATACCCA
JMFS089C03+           CCTTCGGTATTTTCACGAATAGTGATAAGATTCACATCATCATACCGAGTCTTATACCCA
                      ____________________________________________________________
consensus             CCTTCGGTATTTTCACGAATAGTGATAAGATTCACATCATCATACCGAGTCTTATACCCA
 
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JMFS047A07+           GGAAGGCTGTTGCAAGGTCTGACATTGGCATAAAGATTGAGCTCTTTCCTCAACGTAAGG
JMFS089C03+           GGAAGGCTGTTGCAAGGTCTGACATTGGCATAAAGATTGAGCTCTTTCCTCAACGTAAGG
                      ____________________________________________________________
consensus             GGAAGGCTGTTGCAAGGTCTGACATTGGCATAAAGATTGAGCTCTTTCCTCAACGTAAGG
 
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JMFS047A07+           TTCAATGAGCGGTGACCCTTTCCGATTGGTGTGGCCATTGGCCCTTTTAAACCAATCTTA
JMFS089C03+           TTCAATGAGCGGTGACCCTTTCCGATTGGTGTGGCCATTGGCCCTTTTAAACCAATCTTA
                      ____________________________________________________________
consensus             TTCAATGAGCGGTGACCCTTTCCGATTGGTGTGGCCATTGGCCCTTTTAAACCAATCTTA
 
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JMFS047A07+           TTTCTTCGTACAGATTCAAGACTCTCCCAAGTAAGAAAACTCTGGGTTCTAGGGTCTATT
JMFS089C03+           TTTCTTCGTACAGATTCAAGACTCTCCCAAGTAAGAAAACTCTGGGTTCTAGGGTCTATT
JMSF008H05+              CTTCGTACAGATTCAAGACTCTCCCAAGTAAGAAAACTCTGGGTTCTAGGGTCTATT
                      ____________________________________________________________
consensus             TTTCTTCGTACAGATTCAAGACTCTCCCAAGTAAGAAAACTCTGGGTTCTAGGGTCTATT
 
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JMFS047A07+           TCCGTCCCCACATAATGTTCTTCCCATTCAATTGGCACATCAGCAACTCTGAATATCTGC
JMFS089C03+           TCCGTCCCCACATAATGTTCTTCCCATTCAATTGGCACATCAGCAACTCTGAATATCTGC
JMSF008H05+           TCCGTCCCCACATAATGTTCTTCCCATTCAATTGGCACATCAGCAACTCTGAATATCTGC
                      ____________________________________________________________
consensus             TCCGTCCCCACATAATGTTCTTCCCATTCAATTGGCACATCAGCAACTCTGAATATCTGC
 
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JMFS047A07+           TTGACAGACTCGGCGATTTCGGGGCCGATGCCATCACCGGGGAAGAGAGTGGCTCGGATC
JMFS089C03+           TTGACAGACTCGGCGATTTCGGGGCCGATGCCATCACCGGGGAAGAGAGTGGCTCGGATC
JMSF008H05+           TTGACAGACTCGGCGATTTCGGGGCCGATGCCATCACCGGGGAAGAGAGTGGCTCGGATC
                      ____________________________________________________________
consensus             TTGACAGACTCGGCGATTTCGGGGCCGATGCCATCACCGGGGAAGAGAGTGGCTCGGATC
 
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JMFS047A07+           AAATTGGAATTTGGCCCAGCCGCCGCTGCAGAAGCGAAGCTTCTATTGAAACCCCCGGCC
JMFS089C03+           AAATTGGAATTTGGCCCAGCCGCCGCTGCAGAAGCGAAGCTTCTATTGAAACCCCCGGCC
JMSF008H05+           AAATTGGAATTTGGCCCAGCCGCCGCTGCAGAAGCGAAGCTTCTATTGAAACCCCCGGCC
                      ____________________________________________________________
consensus             AAATTGGAATTTGGCCCAGCCGCCGCTGCAGAAGCGAAGCTTCTATTGAAACCCCCGGCC
 
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JMFS047A07+           GAAGCGACAGTTGAAGTGCTGTTAAGGAAGTTGCTTCGGAGGAGCCGTCTTGCGATTTGA
JMFS089C03+           GAAGCGACAGTTGAAGTGCTGTTAAGGAAGTTGCTTCGGAGGAGCCGTCTTGCGATTTGA
JMSF008H05+           GAAGCGACAGTTGAAGTGCTGTTAAGGAAGTTGCTTCGGAGGAGCCGTCTTGCGATTTGA
                      ____________________________________________________________
consensus             GAAGCGACAGTTGAAGTGCTGTTAAGGAAGTTGCTTCGGAGGAGCCGTCTTGCGATTTGA
 
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JMFS047A07+           GAAGCCCATCGTCGATGATCGCCTGTGACTATC                           
JMFS089C03+           GAAG-CCATCGTCGATGATCGCCTGTGACTATC                           
JMSF008H05+           GAAG-CCATCGTCGATGATCGCCTGTGACTATCGATCAATCGGAGCACTTATTACCAGCC
                      ____________________________________________________________
consensus             GAAG-CCATCGTCGATGATCGCCTGTGACTATCGATCAATCGGAGCACTTATTACCAGCC