Contig 002104:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003G11Sequence544002104 (5)ref|XP_006344418.1|132PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]513003936 (4)gb|AFK47156.1|5e-24unknown [Medicago truncatula]
JMSF005E17Sequence427002104 (5)ref|XP_006344418.1|132PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]152006007 (14)
JMSF008E07Sequence321002104 (5)ref|XP_006344418.1|102PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]506003936 (4)ref|XP_006344418.1|95.5PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]
JMSF011G23Sequence268002104 (5)ref|XP_006344418.1|83.2PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]561003936 (4)ref|XP_006344418.1|189PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]
JMSF013J11Sequence513002104 (5)ref|XP_006344418.1|125PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]655003936 (4)ref|XP_006344418.1|288PREDICTED: uncharacterized protein LOC102593974 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF003G11+ AGGTG
                      ____________________________________________________________
consensus AGGTG
 
. : . : . : . : . : . :
JMFF003G11+ AGTTGGGATCGGAAATTGGAAGAAGGGGCGGCGGCGATGTGGGTTTTCAAGGTTTCGGAG
JMSF013J11+ GCGGCGNCGATGTGGGTTTCCAAGGTTTCGGAG
                      ____________________________________________________________
consensus AGTTGGGATCGGAAATTGGAAGAAGGGGCGGCGGCGATGTGGGTTTTCAAGGTTTCGGAG
 
. : . : . : . : . : . :
JMFF003G11+ AGATGGGTGGCGAGCGAAGGAGGGGCGAGAGAGACTTCTGGGTGGAGAGAATGGGAGAGA
JMSF005E17+ GGAGAGA
JMSF013J11+ AGATGGGTGNCGAGCGAAGGAGGGGCGAGAGAGACTTCTGGGTGGAGAGAATGGGAGAGA
                      ____________________________________________________________
consensus AGATGGGTGGCGAGCGAAGGAGGGGCGAGAGAGACTTCTGGGTGGAGAGAATGGGAGAGA
 
. : . : . : . : . : . :
JMFF003G11+ GAGAGGTGGTGGGAGGGTTGGGTGGTGAACGGAGAGATGACGTGGTAGTGATCGAAGGAG
JMSF005E17+ GAGAGGTGGTGGGAGGNTTGGNTGGTGAACGGAGAGATGACGTGGTAGTGATCGAAGGAG
JMSF013J11+ GAGAGGTGGTGGGAGGGTTGGGTGGTGAACGGAGAGATGACGTGGTAGTGATCGAAGGAG
                      ____________________________________________________________
consensus GAGAGGTGGTGGGAGGGTTGGGTGGTGAACGGAGAGATGACGTGGTAGTGATCGAAGGAG
 
. : . : . : . : . : . :
JMFF003G11+ ACGGNGGAGGAGATGAAGGAGGAGAGAGTGGCGGGAGAGGAGGAGGTGAAGGTGGTCCCC
JMSF005E17+ ACGGCGGAGGAGATGAAGGAGGAGAGAGTGGCGGGAGAGGAGGAGGTGAAGGTGGTCCCC
JMSF013J11+ ACGGCGGAGGAGATGAAGGAGGAGAGAGTGGCGGGAGAGGAGGAGGTGAAGGTGGTCCCC
JMSF008E07+ GAGGAGGTGAAGGTGGTCCCC
                      ____________________________________________________________
consensus ACGGCGGAGGAGATGAAGGAGGAGAGAGTGGCGGGAGAGGAGGAGGTGAAGGTGGTCCCC
 
. : . : . : . : . : . :
JMFF003G11+ ACCAGCTNGACGGTGATTGGGACGGAGACTTGGAGGGAAAGGAGGGCGGCGATGGTGGCC
JMSF005E17+ ACCAGCTTGACGGTGATTGGGACGGAGACTTGGAGGGAAAGGAGGGCGGCGATGGTGGCC
JMSF011G23+ GACGGAGACTTGGAGGGAAAGGAGGGCGGCGATGGTGGCC
JMSF013J11+ ACCAGCTTGACGGTGATTGGGACGGAGACTTGGAGGGAAAGGAGGGCGGCGATGGTGGCC
JMSF008E07+ ACCAGCTTGACGGTGATTGGGACGGAGACTTGGAGGGAAAGGAGGGCGGCGATGGTGGCC
                      ____________________________________________________________
consensus ACCAGCTTGACGGTGATTGGGACGGAGACTTGGAGGGAAAGGAGGGCGGCGATGGTGGCC
 
. : . : . : . : . : . :
JMFF003G11+ GGCTGTTGAGGCGAGGTTTGGGAGAGAGTTTTCTTCAGATAGGAAGGTAGAGAAAGGAAG
JMSF005E17+ GGCTGTTGAGGCGAGGTTTGGGAGAGAGTTTTCTTCAGATAGGAAGGTAGAGAAAGGAAG
JMSF011G23+ GGCTGTTGAGGCGAGGTTTGGGAGAGAGTTTTCTTCAGATAGGAAGGTAGAGAAAGGAAG
JMSF013J11+ GGCTGTTGAGGCGAGGTTTGGGAGAGAGTTTTCTTCAGATAGGAAGGTAGAGAAAGGAAG
JMSF008E07+ GGCTGTTGAGGCGAGGTTTGGGAGAGAGTTTTCTTCAGATAGGAAGGTAGAGAAAGGAAG
                      ____________________________________________________________
consensus GGCTGTTGAGGCGAGGTTTGGGAGAGAGTTTTCTTCAGATAGGAAGGTAGAGAAAGGAAG
 
. : . : . : . : . : . :
JMFF003G11+ GAGTCATTGGTGGCTTGAGGGTCAACCCTGGATTGTTGAGCAAGAAAGGAGTCCAATCCC
JMSF005E17+ GAGTCATTGGTGGCTTGAGGGTCAACCCTGGATTGTTGAGCAAGAAAGGAGTCCAATCCC
JMSF011G23+ GAGTCATTGGTGGCTTGAGGGTCAACCCTGGATTGTTGAGCAAGAAAGGAGTCCAATCCC
JMSF013J11+ GAGTCATTGGTGGCTTGAGGGTCAACCCTGGATTGTTGAGCAAGAAAGGAGTCCAATCCC
JMSF008E07+ GAGTCATTGGTGGCTTGAGGGTCAACCCTGGATTGTTGAGCAAGAAAGGAGTCCAATCCC
                      ____________________________________________________________
consensus GAGTCATTGGTGGCTTGAGGGTCAACCCTGGATTGTTGAGCAAGAAAGGAGTCCAATCCC
 
. : . : . : . : . : . :
JMFF003G11+ AAAATTGGGGCGGAGATGGTGACCGTGGCGGTGGCGAGGAGGCGGAGTAGGAGGAGGAAG
JMSF005E17+ AAAATTGGGGCGGAGATGGTGACCGTGGCGGTGGCGAGGAGGCGGAGTAGGAGGAGGAAG
JMSF011G23+ AAAATTGGGGCGGAGATGGTGACCGTGGCGGTGGCGAGGAGGCGGAGTAGGAGGAGGAAG
JMSF013J11+ AAAATTGGGGCGGAGATGGTGACCGTGGCGGTGGCGAGGAGGCGGAGTAGGAGGAGGAAG
JMSF008E07+ AAAATTGGGGCGGAGATGGTGACCGTGGCGGTGGCGAGGAGGCGGAGTAGGAGGAGGAAG
                      ____________________________________________________________
consensus AAAATTGGGGCGGAGATGGTGACCGTGGCGGTGGCGAGGAGGCGGAGTAGGAGGAGGAAG
 
. : . : . : . : . : . :
JMFF003G11+ ACGACGGTCGGGAGCATTTNTAAGACCTGCGCCGATCCGGTTCAGTTATCGGAGCGAC
JMSF005E17+ ACGACGGTCGGGAGCATTTCTAAGACCTGCGCCGATCCGGTTCAGTTATCGGAGCGAC
JMSF011G23+ ACGACGGTCGGGAGCATTTCTAAGACCTGCGCCGATCCGGTTCAGT
JMSF013J11+ ACGACGGTCGGGAGCATTTCTAAGACCTGCGCCGATCCGGTTCAGTTATCGGAGCGAC
JMSF008E07+ ACGACGGTCGGGAGTATTTCTAAGACCTGCGCCGATCCGGTTCAGTTATCGGAGCGACTC
                      ____________________________________________________________
consensus ACGACGGTCGGGAGCATTTCTAAGACCTGCGCCGATCCGGTTCAGTTATCGGAGCGACTC