Contig 002100:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030B20Sequence436002100 (6)620006880 (5)ref|XP_008369312.1|84.7PREDICTED: uncharacterized protein LOC103432881 [Malus domestica] ref|XP_0083693
JMFS028B05Sequence512002100 (6)
JMSF007N03Sequence336002100 (6)731006880 (5)ref|XP_011076628.1|166PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum]
JMSF012P24Sequence266002100 (6)742006880 (5)ref|XP_011076628.1|174PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum]
JMSF013I23Sequence367002100 (6)ref|XP_009765484.1|181PREDICTED: uncharacterized protein LOC104217025 [Nicotiana sylvestris]733006880 (5)ref|XP_011076628.1|166PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum]
JMSF048F09Sequence690002100 (6)ref|XP_009765484.1|144PREDICTED: uncharacterized protein LOC104217025 [Nicotiana sylvestris]751006880 (5)ref|XP_011076628.1|180PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum]

Alignment

This contig is upended


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JMSF013I23+                                                   ATCGCGCCCGAGACAGCTAC
                      ____________________________________________________________
consensus                                                     ATCGCGCCCGAGACAGCTAC
 
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JMSF013I23+           ACATACGATCCAAACGAGAAGTGCCATGTTCAGTGGATTCCTTATCCATTCTTTACAAAT
JMSF048F09+                                                           TTCTTTACAAAT
                      ____________________________________________________________
consensus             ACATACGATCCAAACGAGAAGTGCCATGTTCAGTGGATTCCTTATCCATTCTTTACAAAT
 
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JMSF013I23+           CTTCCGAAGAGACGTCCAATCAATTTTCCGTGAAAAGAGCCTATGCAAGCGCTCACGGAG
JMSF048F09+           CTTCCGAAGAGACGTCCAATCAATTTTCCGTGAAAAGAGCCTATGCAAGCGCTCACGGAG
                      ____________________________________________________________
consensus             CTTCCGAAGAGACGTCCAATCAATTTTCCGTGAAAAGAGCCTATGCAAGCGCTCACGGAG
 
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JMSF013I23+           ATGACGGCTGCCAGAAGAGGGCACAGCACGAGAAATCTCGTCCCTTTCCTCGGCAATCTG
JMSF048F09+           ATGACGGCTGCCAGAAGAGGGCACAGCACGAGAAATCTCGTCCCTTTCCTCGGCAATCTG
                      ____________________________________________________________
consensus             ATGACGGCTGCCAGAAGAGGGCACAGCACGAGAAATCTCGTCCCTTTCCTCGGCAATCTG
 
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JMSF013I23+           CTGAAACTTGGCAGACGGGGAAGCCAAATTCCCGAACTTGAGGAACTGCAGCCTCTTCGG
JMSF048F09+           CTGAAACTTGGCAGACGGGGAAGCCAAATTCCCGAACTTGAGGAACTGCAGCCTCTTCGG
                      ____________________________________________________________
consensus             CTGAAACTTGGCAGACGGGGAAGCCAAATTCCCGAACTTGAGGAACTGCAGCCTCTTCGG
 
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JMSF013I23+           GATAGAAATAGAACCACCTTGGAATCGTTTTTGAGGATTATCATCACTCACGAGCCCTCT
JMSF048F09+           GATAGAAATAGAACCACCTTGGAATCGTTTTTGAGGATTATCATCACTCACGAGCCCTCT
JMFF030B20+                                                                      T
JMFS028B05+                                     GTTTTTGAGGATTATCATCACTCACGAGCCCTCT
                      ____________________________________________________________
consensus             GATAGAAATAGAACCACCTTGGAATCGTTTTTGAGGATTATCATCACTCACGAGCCCTCT
 
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JMSF013I23+           TTGAGACGAAGAAATGTGCAGAGCAGTGTGAGTCGGCCCTTGAGA               
JMSF048F09+           TTGAGACGAAGAAATGTGCAGAGCAGTGTGAGTCGGCCCTTGAGAACCATTCGAATTACT
JMFF030B20+           TTGAGACGAAGAAATGTGCAGAGCAGTGTGAGTCGGCCCTTGAGAACCATTCGAATTACT
JMFS028B05+           TTGAGACGAAGAAATGTGCAGAGCAGTGTGAGTCGGCCCTTGAGAACCATTCGAATTACT
                      ____________________________________________________________
consensus             TTGAGACGAAGAAATGTGCAGAGCAGTGTGAGTCGGCCCTTGAGAACCATTCGAATTACT
 
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JMSF048F09+           TTCCAAAACCTTACCATCATTTTCACTAACATCATTGGAACCCATCCTTGCTTCCTACAA
JMFF030B20+           TTCCAAAACCTTACCATCATTTTCACTAACATCATTGGAACCCATCCTTGCTTCCTACAA
JMFS028B05+           TTCCAAAACCTTACCATCATTTTCACTAACATCATTGGAACCCATCCTTGCTTCCTACAA
                      ____________________________________________________________
consensus             TTCCAAAACCTTACCATCATTTTCACTAACATCATTGGAACCCATCCTTGCTTCCTACAA
 
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JMSF048F09+           ATTTTCTTGAGCCCCAATTCTTTTTACACAAAAATATTATACTAGGCTGACCATTTTCTG
JMFF030B20+           ATTTTCTTGAGCCCCAATTCTTTTTACACAAAAATATTATACTAGGCTGACCATTTTCTG
JMFS028B05+           ATTTTCTTGAGCCCCAATTCTTTTTACACAAAAATATTATACTAGGCTGACCATTTTCTG
JMSF012P24+                                                      AGGCTGACCATTTTCTG
JMSF007N03+                                   TACACAAAAATATTATACTAGGCTGACCATTTTCTG
                      ____________________________________________________________
consensus             ATTTTCTTGAGCCCCAATTCTTTTTACACAAAAATATTATACTAGGCTGACCATTTTCTG
 
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JMSF048F09+           TGCATTTCCTCTTCAACCCAAAGAAGAGCAGAGTGATAAGATCAATCAATCATCATCAAT
JMFF030B20+           TGCATTTCCTCTTCAACCCAAAGAAGAGCAGAGTGATAAGATCAATCAATCATCATCAAT
JMFS028B05+           TGCATTTCCTCTTCAACCCAAAGAAGAGCAGAGTGATAAGATCAATCAATCATCATCAAT
JMSF012P24+           TGCATTTCCTCTTCAACCCAAAGAAGAGCAGAGTGATAAGATCAATCAATCATCATCAAT
JMSF007N03+           TGCATTTCCTCTTCAACCCAAAGAAGAGCAGAGTGATAAGATCAATCAATCATCATCAAT
                      ____________________________________________________________
consensus             TGCATTTCCTCTTCAACCCAAAGAAGAGCAGAGTGATAAGATCAATCAATCATCATCAAT
 
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JMSF048F09+           CTGAACCAAAGATTGAAGCTTTATTTAGTTCCCCCCAATCCATTGACCAATTTTGCAAGA
JMFF030B20+           CTGAACCAAAGATTGAAGCTTTATTTAGTTCCCCCCAATCCATTGACCAATTTTGCAAGA
JMFS028B05+           CTGAACCAAAGATTGAAGCTTTATTTAGTTCCCCCCAATCCATTGACCAATTTTGCAAGA
JMSF012P24+           CTGAACCAAAGATTGAAGCTTTATTTAGTTCCCCCCAATCCATTGACCAATTTTGCAAGA
JMSF007N03+           CTGAACCAAAGATTGAAGCTTTATTTAGTTCCCCCCAATCCATTGACCAATTTTGCAAGA
                      ____________________________________________________________
consensus             CTGAACCAAAGATTGAAGCTTTATTTAGTTCCCCCCAATCCATTGACCAATTTTGCAAGA
 
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JMSF048F09+           TTTTCAACCCAGAATAAGGAGCACTAAAAGAGCAGCTTTTTTGGTATGCTTTTTACGTTT
JMFF030B20+           TTTTCAACCCAGAATAAGGAGCACTAAAAGAGCAGCTTTTTTGGTATGCTTTTTACGTTT
JMFS028B05+           TTTTCAACCCAGAATAAGGAGCACTAAAAGAGCAGCTTTTTTGGTATGCTTTTTACGTTT
JMSF012P24+           TTTTCAACCCAGAATAAGGAGCACTAAAAGAGCAGCTTTTTTGGTATGCTTTTTACGTTT
JMSF007N03+           TTTTCAACCCAGAATAAGGAGCACTAAAAGAGCAGCTTTTTTGGTATGCTTTTTACGTTT
                      ____________________________________________________________
consensus             TTTTCAACCCAGAATAAGGAGCACTAAAAGAGCAGCTTTTTTGGTATGCTTTTTACGTTT
 
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JMSF048F09+           CTTTGATGAGAAGGAAAGAGAGAATCACATAAAGCAAAGCAAACAAAATTACAAAAGACA
JMFF030B20+           CTTTGATGAGAAGGAAAGAGAGAATCACATAAAGCAAAGCAAACAAAATTACAAAAGACA
JMFS028B05+           CTTTGATGAGAAGGAAAGAGAGAATCACATAAAGCAAAGCAAACAAAATTACAAAAGACA
JMSF012P24+           CTTTGATGAGAAGGAAAGAGAGAATCACATAAAGCAAAGCAAACAAAATTACAAAAGACA
JMSF007N03+           CTTTGATGAGAAGGAAAGAGAGAATCACATAAAGCAAAGCAAACAAAATTACAAAAGACA
                      ____________________________________________________________
consensus             CTTTGATGAGAAGGAAAGAGAGAATCACATAAAGCAAAGCAAACAAAATTACAAAAGACA
 
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JMSF048F09+           GGAAAGACAGAAATT                                             
JMFF030B20+           GGAAAGACAGAAATT                                             
JMFS028B05+           GGAAAGACAGAAATTAGGGAGAAACAGGAAGACCCAAGTATTAAAATGAAAGAATTGT  
JMSF012P24+           GGAAAGAC                                                    
JMSF007N03+           GGAAAGACAGAAATTAGGGAGAAACAGGAAGACCCAAGTATTAAAATGAAAGAATTGTCC
                      ____________________________________________________________
consensus             GGAAAGACAGAAATTAGGGAGAAACAGGAAGACCCAAGTATTAAAATGAAAGAATTGTCC