| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF007M18 | Sequence | 278 | 002099 (5) | 731 | 013976 (5) | gb|KHG25437.1| | 1e-144 | hypothetical protein F383_06753 [Gossypium arboreum] | |||
| JMSF011I16 | Sequence | 281 | 002099 (5) | 751 | 013976 (5) | gb|ADI87417.1| | 6e-140 | fructokinase-like protein 1 [Gossypium hirsutum] | |||
| JMSF014D08 | Sequence | 484 | 002099 (5) | ref|XP_009629251.1| | 4e-10 | PREDICTED: fructokinase-1 [Nicotiana tomentosiformis] | 752 | 013976 (5) | gb|ADI87417.1| | 1e-153 | fructokinase-like protein 1 [Gossypium hirsutum] |
| JMSF025I10 | Sequence | 657 | 002099 (5) | emb|CDP06530.1| | 2e-50 | unnamed protein product [Coffea canephora] | 745 | 013976 (5) | gb|ADI87421.1| | 4e-120 | fructokinase-like protein 1 [Nicotiana tabacum] |
| JMSF029A06 | Sequence | 641 | 002099 (5) | ref|XP_009629251.1| | 1e-53 | PREDICTED: fructokinase-1 [Nicotiana tomentosiformis] | 703 | 013976 (5) | gb|KHG25437.1| | 6e-109 | hypothetical protein F383_06753 [Gossypium arboreum] |
This contig is upended
. : . : . : . : . : . :
JMSF029A06+ TTCCCCAAACTCG
____________________________________________________________
consensus TTCCCCAAACTCG
. : . : . : . : . : . :
JMSF029A06+ TCATCCCCGACTTTCCCCATAAACGCGGCTCTCCCACCCAGCCTCACGTGAGATATAGCC
JMSF025I10+ ATCCCCGACTTTCCCCATAAACGCGGCTCTCCCACCCAGCCTCACGTGAGATATAGCC
____________________________________________________________
consensus TCATCCCCGACTTTCCCCATAAACGCGGCTCTCCCACCCAGCCTCACGTGAGATATAGCC
. : . : . : . : . : . :
JMSF029A06+ ACATTTGACGGCGGCCCTCCCGGAGCTCTGACGAACTCCGGCGGGTTCCACTGCAGCATC
JMSF025I10+ ACATTTGACGGCGGCCCTCCCGGAGCTCTGACGAACTCCGGCGGGTTCCACTGCAGCATC
____________________________________________________________
consensus ACATTTGACGGCGGCCCTCCCGGAGCTCTGACGAACTCCGGCGGGTTCCACTGCAGCATC
. : . : . : . : . : . :
JMSF029A06+ TTCCATTCGGAATATATATCCGGGTCCATTTGCTCCGGCGCCACCCTCACCGTGGGCACG
JMSF025I10+ TTCCATTCGGAATATATATCCGGGTCCATTTGCTCCGGCGCCACCCTCACCGTGGGCACG
JMSF014D08+ CACG
____________________________________________________________
consensus TTCCATTCGGAATATATATCCGGGTCCATTTGCTCCGGCGCCACCCTCACCGTGGGCACG
. : . : . : . : . : . :
JMSF029A06+ AACTCCTTCTGGGCCGCCCCGAAGCAGCATATCAGAGGCGGGGATTCGTAGGGAAAATCG
JMSF025I10+ AACTCCTTCTGGGCCGCCCCGAAGCAGCATATCAGAGGCGGGGATTCGTAGGGAAAATCG
JMSF014D08+ AACTCCTTCTGGGCCGCCCCGAAGCAGCATATCAGAGGCGGGGATTCGTAGGGAAAATCG
____________________________________________________________
consensus AACTCCTTCTGGGCCGCCCCGAAGCAGCATATCAGAGGCGGGGATTCGTAGGGAAAATCG
. : . : . : . : . : . :
JMSF029A06+ ACACCGTCGTCGTAATCGTCTACCTCGTCAGCATTTACCGGAGGCTCAACGTAGGACTCA
JMSF025I10+ ACACCGTCGTCGTAATCGTCTACCTCGTCAGCATTTACCGGAGGCTCAACGTAGGACTCA
JMSF014D08+ ACACCGTCGTCGTAATCGTCTACCTCGTCAGCATTTACCGGAGGCTCAACGTAGGACTCA
____________________________________________________________
consensus ACACCGTCGTCGTAATCGTCTACCTCGTCAGCATTTACCGGAGGCTCAACGTAGGACTCA
. : . : . : . : . : . :
JMSF029A06+ AATTCTTCGGTGTCACTTTGAGTTTCTTTTCTTGGACGAGCCCTGGACCTTTTTGTAGCG
JMSF025I10+ AATTCTTCGGTGTCACTTTGAGTTTCTTTTCTTGGACGAGCCCTGGACCTTTTTGTAGCG
JMSF014D08+ AATTCTTCGGTGTCACTTTGAGTTTCTTTTCTTGGACGAGCCCTGGACCTTTTTGTAGCG
____________________________________________________________
consensus AATTCTTCGGTGTCACTTTGAGTTTCTTTTCTTGGACGAGCCCTGGACCTTTTTGTAGCG
. : . : . : . : . : . :
JMSF029A06+ ACAGATTCTATGGTTTCACTTTGAGGTTCTTTTTTTGGACGACCTCTGGGCTTTGAAGAA
JMSF025I10+ ACAGATTCTATGGTTTCACTTTGAGGTTCTTTTTTTGGACGACCTCTGGGCTTTGAAGAA
JMSF011I16+ TTTGAGGTTCTTTTTTTGGACGACCTCTGGGCTTTGAAGAA
JMSF014D08+ ACAGATTCTATGGTTTCACTTTGAGGTTCTTTTTTTGGACGACCTCTGGGCTTTGAAGAA
JMSF007M18+ GAGGTTCTTTTTTTGGACGACCTCTGGGCTTTGAAGAA
____________________________________________________________
consensus ACAGATTCTATGGTTTCACTTTGAGGTTCTTTTTTTGGACGACCTCTGGGCTTTGAAGAA
. : . : . : . : . : . :
JMSF029A06+ GGTGAAGTCTTTTTCAGGGCACGGTGGGAGGTTTTTGAGGGTTGTTGAGTGGTGGTGTGG
JMSF025I10+ GGTGAAGTCTTTTTCAGGGCACGGCGGGAGGTTTTTGAGGGTTGTTGAGTGGTGGTGTGG
JMSF011I16+ GGTGAAGTCTTTTTCAGGGCACGGCGGGAGGTTTTTGAGGGTTGTTGAGTGGTGGTGTGG
JMSF014D08+ GGTGAAGTCTTTTTCAGGGCACGGCGGGAGGTTTTTGAGGGTTGTTGAGTGGTGGTGTGG
JMSF007M18+ GGTGAAGTCTTTTTCAGGGCACGGCGGGAGGTTTTTGAGGGTTGTTGAGTGGTGGTGTGG
____________________________________________________________
consensus GGTGAAGTCTTTTTCAGGGCACGGCGGGAGGTTTTTGAGGGTTGTTGAGTGGTGGTGTGG
. : . : . : . : . : . :
JMSF029A06+ TCATCGGCGGAGGAGGACTTTGGCGGATTTGGGTGGCAAACGTAACGGTGTTTGGGTAAA
JMSF025I10+ TCATCGGCGGAGGAGGACTTTGGCGGATTTGGGTGGCAAACGTAACGGTGTTTGGGTAAA
JMSF011I16+ TCATCGGCGGAGGAGGACTTTGGCGGATTTGGGTGGCAAACGTAACGGTGTTTGGGTAAA
JMSF014D08+ TCATCGGCGGAGGAGGACTTTGGCGGATTTGGGTGGCAAACGTAACGGTGTTTGGGTAAA
JMSF007M18+ TCATCGGCGGAGGAGGACTTTGGCGGATTTGGGTGGCAAACGTAACGGTGTTTGGGTAAA
____________________________________________________________
consensus TCATCGGCGGAGGAGGACTTTGGCGGATTTGGGTGGCAAACGTAACGGTGTTTGGGTAAA
. : . : . : . : . : . :
JMSF029A06+ AAGGTTGATACTTTGAAATGGGTAAGAGAGTTGAGGGCTAGAGAGTGAGAATGCTGAGAA
JMSF025I10+ AAGGTTGATACTTTGAAATGGGTAAGAGAGTTGAGGGCTAGAGAGTGAGAATGCTGAGAA
JMSF011I16+ AAGGTTGATACTTTGAAATGGGTAAGAGAGTTGAGGGCTAGAGAGTGAGAATGCTGAGAA
JMSF014D08+ AAGGTTGATACTTTGAAATGGGTAAGAGAGTTGAGGGCTAGAGAGTGAGAATGCTGAGAA
JMSF007M18+ AAGGTTGATACTTTGAAATGGGTAAGAGAGTTGAGGGCTAGAGAGTGAGAATGCTGAGAA
____________________________________________________________
consensus AAGGTTGATACTTTGAAATGGGTAAGAGAGTTGAGGGCTAGAGAGTGAGAATGCTGAGAA
. : . : . : . : . : . :
JMSF029A06+ AGGGAAGATGGAAGGAAATGAATTGC
JMSF025I10+ AGGGAAGATGGAAGGAAATGAATTGCTGCCATGGCCATCATTGGTGTTAGGGTTTAT
JMSF011I16+ AGGGAAGATGGAAGGAAATGAATTGCTGCCATGGCCATCATTGGTGTTAGGGTTTAT
JMSF014D08+ AGGGAAGATGGAAGGAAATGAATTGCTGCCATGGCCATCATTGGTGTTAGGGTTTAT
JMSF007M18+ AGGGAAGATGGAAGGAAATGAATTGCTGCCATGGCCATCATTGGTGTTAGGGTTTATCAC
____________________________________________________________
consensus AGGGAAGATGGAAGGAAATGAATTGCTGCCATGGCCATCATTGGTGTTAGGGTTTATCAC