Contig 002097:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF026D19-          AAAAGTAAGAACAAATACTGATCACTTTGTCTAGGGCATCTAAACTTTGTCACACCAAAA
rJMSF007K09-                       AATACTGATCACTTTGTCTAGGGCATCTAAACTTTGTCACACCAAAA
                      ____________________________________________________________
consensus             AAAAGTAAGAACAAATACTGATCACTTTGTCTAGGGCATCTAAACTTTGTCACACCAAAA
 
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rJMSF026D19-          TGAATGTAAGTAACCTCTACAGAAGCTGAGAACAGTGCAAATTCTTATATCAGAAAAACA
JMFN046O01+                                                              AGAAAAACA
JMFF008B14+            GAATGTAAGTAACCTNTACAGAAGNTGAGAACAGTGCAAACTCTTAGAT-AGAAAAACA
rJMSF007K09-          TGAATGTAAGTAACCTCTACAGAAGCTGAGAACAGTGCAAATTCTTATATCAGAAAAACA
                      ____________________________________________________________
consensus             TGAATGTAAGTAACCTCTACAGAAGCTGAGAACAGTGCAAATTCTTATATCAGAAAAACA
 
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rJMSF026D19-          TAAGAACTAGTTAATGCTTTCATCTCAAAAAAGTTAAGGCCATCATATATGTATTTAACA
JMFN046O01+           TAAGAACTAGTTAATGCTTTCATCTCAAAAAAGTTAAGGCCATCATATATGTATTTAACA
JMFF008B14+           CAAGAACTAGTTAATGCTTTCATCTCAAAAAAGTTAAGGCCATCATCTATGT        
rJMSF007K09-          TAAGAACTAGTTAATGCTTTCATCTCAAAAAAGTTAAGGCCATCATATATGTATTTAACA
                      ____________________________________________________________
consensus             TAAGAACTAGTTAATGCTTTCATCTCAAAAAAGTTAAGGCCATCATATATGTATTTAACA
 
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rJMSF026D19-          TCAGAATAGGCTACTCAAAGGCAGTTTGAATGAAGCTTGCAACCTCCCCCATTTTGTCCT
JMFN046O01+           TCAGAATAGGCTACTCAAAGGCAGTTTGAATGAAGCTTGCAACCTCCCCCATTTTGTCCT
rJMSF007K09-          TCAGAATAGGCTACTCAAAGGCAGTTTGAATGAAGCTTGCAACCTCCCCCATTTTGTCCT
                      ____________________________________________________________
consensus             TCAGAATAGGCTACTCAAAGGCAGTTTGAATGAAGCTTGCAACCTCCCCCATTTTGTCCT
 
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rJMSF026D19-          TCAAAGCTTGTTTCATCGAAGCTGTCCTCTGAACCTCAATAGTCTCCGCTTCTAGTTGGG
JMFN046O01+           TCAAAGCTTGTTTCATCGAAGCTGTCCTCTGAACCTCAATAGTCTCCGCTTCTAGTTGGG
rJMSF007K09-          TCAAAGCTTGTTTCATCGAAGCTGTCCTCTGAACCTCAATAGTCTCCGCTTCTAGTTGGG
                      ____________________________________________________________
consensus             TCAAAGCTTGTTTCATCGAAGCTGTCCTCTGAACCTCAATAGTCTCCGCTTCTAGTTGGG
 
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rJMSF026D19-          TACTTAAAGCAGCTTTCTTAAGCGTCATATTCAAAATATCATTATTTAAGGTACCCAACT
JMFN046O01+           TACTTAAAGCAGCTTTCTTAAGCGTCATATTCAAAATATCATTATTTAAGGTACCCAACT
rJMSF007K09-          TACTTAAAGCAGCTTTCTTAAGCGTCATATTCAAAATATCATTATTTAAGGTACCCAACT
                      ____________________________________________________________
consensus             TACTTAAAGCAGCTTTCTTAAGCGTCATATTCAAAATATCATTATTTAAGGTACCCAACT
 
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rJMSF026D19-          GATCTTGACTGGTTTTAATATCTGCATCTAGTTGGTGTAGTTGAACAATCAGGTCATTAT
JMFN046O01+           GATCTTGACTGGTTTTAATATCTGCATCTAGTTGGTGTAGTTGAACAATCAGGTCATTAT
rJMSF007K09-          GATCTTGACTGGTTTTAATATCTGCATCTAGTTGGTGTAGTTGAACAATCAGGTCATTAT
                      ____________________________________________________________
consensus             GATCTTGACTGGTTTTAATATCTGCATCTAGTTGGTGTAGTTGAACAATCAGGTCATTAT
 
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rJMSF026D19-          ACAGCCGTCCTTCCGCTAAAACGGTTTGCTCTAACTCCTGAAGATGGCGCCGTAACACAG
JMFN046O01+           ACAGCCGTCCTTCCGCTAAAACGGTTTGCTCTAACTCCTGAAGATGGCGCCGTAACACAG
rJMSF007K09-          ACAGCCGTCCTTCCGCTAAAACGGTTTGCTCTAACTCCTGAAGATGGCGCCGTAACACAG
                      ____________________________________________________________
consensus             ACAGCCGTCCTTCCGCTAAAACGGTTTGCTCTAACTCCTGAAGATGGCGCCGTAACACAG
 
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rJMSF026D19-          CAGAATCCTGCGTATTAGCCATGAGGTAACTCAAATCCTGACGGACGAAGACCGGTGATT
JMFN046O01+           CAGAATCCTGCGTATTAGCCATGAGGTAACTCAAATCCTGACGGACGAAGACCGGTGATT
rJMSF007K09-          CAGAATCCTGCGTATTAGCCATGAGGTAACTCAAATCCTGACGGACGAAGACCGGTGATT
                      ____________________________________________________________
consensus             CAGAATCCTGCGTATTAGCCATGAGGTAACTCAAATCCTGACGGACGAAGACCGGTGATT
 
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rJMSF026D19-          GCGATCGAGGACGACGAGCGAAGACGGAGCGAAGACGGATGACTGAAGGAGCGATCAAGG
JMFN046O01+           GCGATCGAGGACGACGAGCGAAGACGGAGCGAAGACGGATGACTGAAGGAGCGATCAAGG
rJMSF007K09-          GCGATCGAGGACGACGAGCGAAGACGGAGCGAAGACGGATGACTGAAGGAGCGATCAAGG
                      ____________________________________________________________
consensus             GCGATCGAGGACGACGAGCGAAGACGGAGCGAAGACGGATGACTGAAGGAGCGATCAAGG
 
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rJMSF026D19-          ACGACGAGCGAAGACGATGATGGAGCGACCTGGCTCAAATTCTGACGGACGAAGACCGGT
JMFN046O01+           ACGACGAGCGAAGACGATGATGGAGCGA                                
rJMSF007K09-          ACGACGAGCGAAGACGATGATGGAGCGACCTGGCTCAAATTCTGACGGACGAAGACCGGT
                      ____________________________________________________________
consensus             ACGACGAGCGAAGACGATGATGGAGCGACCTGGCTCAAATTCTGACGGACGAAGACCGGT
 
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rJMSF026D19-          GAGTCGATCGAGGACGACGAGCGAAGACGAATGACTGAAGGAGCGATCAAGGACGACGAG
rJMSF007K09-          GAGTCGATCGAGGACGACGAGCGAAGACGAATGACTGAAGGAGCGATCAAGGACGACGAG
JMFN043M10+                             GAGCGAAGACGAATGACTGAAGGAGCGATCAAGGACGACGAG
                      ____________________________________________________________
consensus             GAGTCGATCGAGGACGACGAGCGAAGACGAATGACTGAAGGAGCGATCAAGGACGACGAG
 
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rJMSF026D19-          CGAAGACGATGATGGAGCGACCTGGCTCAAACGGACGAANACCGGTGATTCGATCGAGGA
rJMSF007K09-          CGAAGACGATGATGGAGCGACCTGGCTCAAACGGACGAAGACCGGTGATNCGATCGAGGA
JMFN043M10+           CGAAGACGATGATGGAGCGACCTGGCTCAAACGGACGAAGACCGGTGATTCGATCGAGGA
                      ____________________________________________________________
consensus             CGAAGACGATGATGGAGCGACCTGGCTCAAACGGACGAAGACCGGTGATTCGATCGAGGA
 
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rJMSF026D19-          CGACGAGCGAAGACGGAGGAAGGAGCAGCGAAAACGGATGACTGATTTAGGAGCGATTGA
rJMSF007K09-          CGACNAGCGAAGACGGAGGAAGGAGCANCGAAAACGGATGACTGATTNAGGAGCGATTGA
JMFN043M10+           CGACGAGCGAAGACGGAGGAAGGAGCAGCGAAGACGGATGACTGATTTAGGAGCGATTGA
                      ____________________________________________________________
consensus             CGACGAGCGAAGACGGAGGAAGGAGCAGCGAAAACGGATGACTGATTTAGGAGCGATTGA
 
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rJMSF026D19-          GNACGACGAGCGAA                                              
rJMSF007K09-          GGACGACNAGCGAA                                              
JMFN043M10+           GGACGACGAGCGAAACGGATGAAGACGGATGAAAGAGCCGCTGGATCTTCGACCGGTGAG
                      ____________________________________________________________
consensus             GGACGACGAGCGAAACGGATGAAGACGGATGAAAGAGCCGCTGGATCTTCGACCGGTGAG
 
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JMFN043M10+           AGAGTCGAAGATCTTTTTGAATCTTCTAGATCCCACACCTTTATTAACCTGGATGAAGAT
JMSF026D19+                        TTTTTGAATCTTCTAGATCCCACACCTTTATTAACCTGGATGAAGAT
                      ____________________________________________________________
consensus             AGAGTCGAAGATCTTTTTGAATCTTCTAGATCCCACACCTTTATTAACCTGGATGAAGAT
 
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JMFN043M10+           CCAGCAGTTACTAAAATCTCAGCTGAATCAAAGGTTATAGACTCTACGGAACTTGTGTGG
JMSF026D19+           CCAGCAGTTACTAAAATCTCAGCTGAATCAAAAGTTATAGACTCTACGGAACTTGTGTGG
                      ____________________________________________________________
consensus             CCAGCAGTTACTAAAATCTCAGCTGAATCAAAGGTTATAGACTCTACGGAACTTGTGTGG
 
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JMFN043M10+           CCAGATAGGGCCTTTATCAATTTTGTCTTAGATTTTGGGATTTTTGGAGAGGAACTTTTC
JMSF026D19+           CCAGATAGGGCCTTTATCAATTTTGTCTTAGATTTTGGGATTTTTGGAGAGGAACTTTTC
JMSF007K09+                                                    TTTTGGAGAGGAACTTTTC
                      ____________________________________________________________
consensus             CCAGATAGGGCCTTTATCAATTTTGTCTTAGATTTTGGGATTTTTGGAGAGGAACTTTTC
 
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JMFN043M10+           GACTTCGTGATTGCTCTATATGTACACCGTCAAATCTTTGGAATGGCTTTCAACTATTAT
JMSF026D19+           GACTTCGTGATTGCTCTATATGTACACCGTCAAATCTTTGGAATGGCTTTCAACTCTTAT
JMSF007K09+           GACTTCGTGATTGCTCTATATGTACACCGTCAAATCTTNGGAATGGCTTTCAACTCTTAT
                      ____________________________________________________________
consensus             GACTTCGTGATTGCTCTATATGTACACCGTCAAATCTTTGGAATGGCTTTCAACTCTTAT
 
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JMFN043M10+           TTTTCTTCCTTCACTCTCAGGTGTACATAGATCAGGTGATGTAGACAGCCTATGTATAGC
JMSF026D19+           TTTTCTTCCTTCACTCTCAGGTGTACATAGATCAGGTGATGTAGACAGCCTATGTATAGC
JMSF007K09+           TTTTCTTCCTTCACTCTCAGGTGTACATAGATCAGGTGATGTAGACAGCCTATGTATAGC
                      ____________________________________________________________
consensus             TTTTCTTCCTTCACTCTCAGGTGTACATAGATCAGGTGATGTAGACAGCCTATGTATAGC
 
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JMFN043M10+           TATGGATGTTGAGTTTTCTCTTTCGATGCAACTTATGTTGAAGACGGTACGAAGGACTGC
JMSF026D19+           TATGGATGTTGAGTTTTCTCTTTCGATGCAACTTATGTTGAAGACGGTACGAAGGACTGC
JMSF007K09+           TATGGATGTTGAGTTTTCTCTTTCGATGCAACTTATGTTGAAGACGGTACGAAGGACTGC
                      ____________________________________________________________
consensus             TATGGATGTTGAGTTTTCTCTTTCGATGCAACTTATGTTGAAGACGGTACGAAGGACTGC
 
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JMFN043M10+           AATAATTGGTTTACGATGAT                                        
JMSF026D19+           AATAATTGGTTTACGATGATTATTTTAGCTAATTAGGTGCGAATTGGAGTTAAATTTGGT
JMSF007K09+           AATAATTGGTTTACGATGATTATTTTAGCTAATTAGGTGCGAATTGGAGTTAAATTTGGT
                      ____________________________________________________________
consensus             AATAATTGGTTTACGATGATTATTTTAGCTAATTAGGTGCGAATTGGAGTTAAATTTGGT
 
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JMSF026D19+           GTTAGATATTACAGGGTAAAGTGAGCTTTTGGTTTTTGATGGATTTGTATCCATTTCTAT
JMSF007K09+           GTTAGATATTACAGGGTAAAGTGAGCTTTTGGTTTTTGATGGATTTGTATCCATTTCTAT
                      ____________________________________________________________
consensus             GTTAGATATTACAGGGTAAAGTGAGCTTTTGGTTTTTGATGGATTTGTATCCATTTCTAT
 
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JMSF026D19+           GTACGGAGTGGTCGTCTATGGCTTTGCGAGGAAGACGACCACGAAGGGCAGAAATGGGGA
JMSF007K09+           GTACGGAGTGGTCGTCTATGGCTTTGCGAGGAAGACGACCACGAAGGGCAGAAATGGGGA
                      ____________________________________________________________
consensus             GTACGGAGTGGTCGTCTATGGCTTTGCGAGGAAGACGACCACGAAGGGCAGAAATGGGGA
 
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JMSF026D19+           AGAAGACTGGGTTGAACCGATGGATTACGGAGTGAGGTGCTCTTTTGATTTTCTATGGCT
JMSF007K09+           AGAAGACTGGGTTGAACCGATGGATTACGGAGTGAGGTGCTCTTTTGATTTTCTATGGCT
                      ____________________________________________________________
consensus             AGAAGACTGGGTTGAACCGATGGATTACGGAGTGAGGTGCTCTTTTGATTTTCTATGGCT
 
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JMSF026D19+           TCGTCTCCATTTCTGTGGAGTGTGGATGGATTGTCGGTTTAGGGAAGAAGACGAAGTGCC
JMSF007K09+           TCGTCTCCATTTCTGTGGAGTGTGGATGGATTGTCGGTTTAGGGAAGAAGACGAAGTGCC
                      ____________________________________________________________
consensus             TCGTCTCCATTTCTGTGGAGTGTGGATGGATTGTCGGTTTAGGGAAGAAGACGAAGTGCC