| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009M13 | Sequence | 571 | 002095 (11) | ref|XP_009794337.1| | 146 | PREDICTED: uncharacterized protein LOC104241118 [Nicotiana sylvestris] | 707 | 002095 (11) | emb|CDP00371.1| | 2e-80 | unnamed protein product [Coffea canephora] |
| JMFF016L09 | Sequence | 570 | 002095 (11) | ref|XP_009794337.1| | 146 | PREDICTED: uncharacterized protein LOC104241118 [Nicotiana sylvestris] | 780 | 002095 (11) | emb|CDP00371.1| | 5e-84 | unnamed protein product [Coffea canephora] |
| JMFF024A21 | Sequence | 527 | 002095 (11) | ref|XP_009794337.1| | 124 | PREDICTED: uncharacterized protein LOC104241118 [Nicotiana sylvestris] | 637 | 008328 (3) | emb|CDP00371.1| | 7e-63 | unnamed protein product [Coffea canephora] |
| JMFF026H24 | Sequence | 535 | 002095 (11) | ref|XP_009794337.1| | 124 | PREDICTED: uncharacterized protein LOC104241118 [Nicotiana sylvestris] | 767 | 008328 (3) | emb|CDP00371.1| | 3e-62 | unnamed protein product [Coffea canephora] |
| JMFF031G11 | Sequence | 540 | 002095 (11) | ref|XP_009794337.1| | 124 | PREDICTED: uncharacterized protein LOC104241118 [Nicotiana sylvestris] | 829 | 002095 (11) | emb|CDP00371.1| | 9e-117 | unnamed protein product [Coffea canephora] |
| JMFF043O18 | Sequence | 639 | 002095 (11) | ref|XP_009794337.1| | 150 | PREDICTED: uncharacterized protein LOC104241118 [Nicotiana sylvestris] | 639 | 008328 (3) | emb|CDP00371.1| | 2e-62 | unnamed protein product [Coffea canephora] |
| JMSF007G08 | Sequence | 373 | 002095 (11) | 794 | 002095 (11) | emb|CDP00371.1| | 2e-120 | unnamed protein product [Coffea canephora] | |||
This contig is upended
. : . : . : . : . : . :
rJMFF009M13- ATGGTTCAA
rJMSF007G08- TGGAGACTTTTCACTAAATTTTCCCATGGTTCAA
rJMFF016L09- A
rJMFF031G11- A
____________________________________________________________
consensus TGGAGACTTTTCACTAAATTTTCCCATGGTTCAA
. : . : . : . : . : . :
rJMFF009M13- TAATTCTGAACTGAAACACTTGTATTCTATCAGGATTTACCGTATAGGAGGATATGGCAA
rJMSF007G08- TAATTCTGAACTGAAACACTTGTATTCTATCAGGATTTACCGTATAGGAGGATATGGCAA
rJMFF016L09- TAATTCTGAACTGAAACACTTGTATTCTATCAGGATTTACCGTATAGGAGGATATGGCAA
rJMFF031G11- TAATTCTGAACTGAAACACTTGTATTCTATCAGGATTTACCGTATAGGAGGATATGGCAA
____________________________________________________________
consensus TAATTCTGAACTGAAACACTTGTATTCTATCAGGATTTACCGTATAGGAGGATATGGCAA
. : . : . : . : . : . :
rJMFF009M13- TGATCAAATATCAATGGTCACAAACACATTACAGTTAATGAGAGTATTGCAAATTGGTTT
rJMSF007G08- TGATCAAATATCAATGGTCACAAACACATTACAGTTAATGAGAGTATTGCAAATTGGTTT
rJMFF016L09- TGATCAAATATCAATGGTCACAAACACATTACAGTTAATGAGAGTATTGCAAATTGGTTT
rJMFF031G11- TGATCAAATATCAATGGTCACAAACACATTACAGTTAATGAGAGTATTGCAAATTGGTTT
____________________________________________________________
consensus TGATCAAATATCAATGGTCACAAACACATTACAGTTAATGAGAGTATTGCAAATTGGTTT
. : . : . : . : . : . :
rJMFF009M13- TTGGTGCAGACAGAAGGACATATTCTCTGCTGATGGAGCCTCGACTCGTGTTCCTATTGA
rJMSF007G08- TTGGTGCAGACAGAAGGACATATTCTCTGCTGATGGAGCCTCGACTCGTGTTCCTATTGA
rJMFF016L09- TTGGTGCAGACAGAAGGACATATTCTCTGCTGATGGAGCCTCGACTCGTGTTCCTATTGA
rJMFF031G11- TTGGTGCAGACAGAAGGACATATTCTCTGCTGATGGAGCCTCGACTCGTGTTCCTATTGA
____________________________________________________________
consensus TTGGTGCAGACAGAAGGACATATTCTCTGCTGATGGAGCCTCGACTCGTGTTCCTATTGA
. : . : . : . : . : . :
rJMFF009M13- TCTTCCAGGGAGTGTTTACGGGCTCTCAAGTTGAGTTTGAGATTTTCAGGCCGGGGAGGC
rJMSF007G08- TCTTCCAGGGAGTGTTTACGGGCTCTCAAGTTGAGTTTGAGATTTTCAGGCCGGGGAGGC
rJMFF016L09- TCTTCCAGGGAGTGTTTACGGGCTCTCAAGTTGAGTTTGAGATTTTCAGGCCGGGGAGGC
rJMFF031G11- TCTTCCAGGGAGTGTTTACGGGCTCTCAAGTTGAGTTTGAGATTTTCAGGCCGGGGAGGC
____________________________________________________________
consensus TCTTCCAGGGAGTGTTTACGGGCTCTCAAGTTGAGTTTGAGATTTTCAGGCCGGGGAGGC
. : . : . : . : . : . :
rJMFF009M13- GTTCTTCCCCTGCGAAACAGAACCGCCAACGCCCTCATCTTCCGGCACAGATCAAATACC
rJMSF007G08- GTTCTTCCCCTGCGAAACAGAACCGCCAACGCCCTCATCTTCCGGCACAGATCAAATACC
rJMFF016L09- GTTCTTCCCCTGCGAAACAGAACCGCCAACGCCCTCATCTTCCGGCACAGATCAAATACC
rJMFF031G11- GTTCTTCCCCTGCGAAACAGAACCGCCAACGCCCTCATCTTCCGGCACAGATCAAATACC
____________________________________________________________
consensus GTTCTTCCCCTGCGAAACAGAACCGCCAACGCCCTCATCTTCCGGCACAGATCAAATACC
. : . : . : . : . : . :
rJMFF009M13- GAGGATGCTTCAATCTCTGCAACGCCTTCGCAATTTTGACCTCCTCCTTGGAGTAAGTCG
rJMSF007G08- GAGGATGCTTCAATCTCTGCAACGCCTTCGCAATTTTGACCTCCTCCTTGGAGTAAGTCG
rJMFF016L09- GAGGATGCTTCAATCTCTGCAACGCCTTCGCAATTTTGACCTCCTCCTTGGAGTAAGTCG
rJMFF031G11- GAGGATGCTTCAATCTCTGCAACGCCTTCGCAATTTTGACCTCCTCCTTGGAGTAAGTCG
____________________________________________________________
consensus GAGGATGCTTCAATCTCTGCAACGCCTTCGCAATTTTGACCTCCTCCTTGGAGTAAGTCG
. : . : . : . : . : . :
rJMFF009M13- CAGTATTTTACAGCTTCATCACCATCTTCAAACACCAGAACACCTTCTCTGACATCTTCA
rJMSF007G08- CAGTATTTTACAGCTTCATCACCATCTTCAAACACCAGAACACCTTCTCTGACATCTTCA
rJMFF016L09- CAGTATTTTACAGCTTCATCACCATCTTCAAACACCAGAACACCTTCTCTGACATCTTCA
rJMFF031G11- CAGTATTTTACAGCTTCATCACCATCTTCAAACACCAGAACACCTTCTCTGACATCTTCA
____________________________________________________________
consensus CAGTATTTTACAGCTTCATCACCATCTTCAAACACCAGAACACCTTCTCTGACATCTTCA
. : . : . : . : . : . :
rJMFF009M13- ACAACCATCTGAAATTTTGTGCCAGTTCCTGTCTGCTTAGCTTGATTTCTCCACTTCCCA
rJMSF007G08- ACAACCATCTGAAATTTTGTGCCAGTTCCTGTCTGCTTAGCTTGATTTCTCCACTTCCCA
rJMFF016L09- ACAACCATCTGAAATTTTGTGCCAGTTCCTGTCTGCTTAGCTTGATTTCTCCACTTCCCA
rJMFF031G11- ACAACCATCTGAAATTTTGTGCCAGTTCCTGTCTGCTTAGCTTGATTTCTCCACTTCCCA
____________________________________________________________
consensus ACAACCATCTGAAATTTTGTGCCAGTTCCTGTCTGCTTAGCTTGATTTCTCCACTTCCCA
. : . : . : . : . : . :
rJMFF009M13- CCTTTGGAAAACAATAACCCAAGCTCCCTTTCAACTTCACTCTGGTTCCTCCGAGTTTTC
rJMSF007G08- CCTTTGGAAAACAATAACCCAAGCTCCCTTTCAACTTCACTCTGGTTCCTCCGAGTTTTC
rJMFF016L09- CCTTTGGAAAACAATAACCCAAGCTCCCTTTCAACTTCACTCTGGTTCCTCCGAGTTTTC
rJMFF031G11- CCTTTGGAAAACAATAACCCAAGCTCCCTTTCAACTTCACTCTGGTTCCTCCGAGTTTTC
JMFF043O18+ CTCTGGTTCCTCCGAGTTTTC
JMFF009M13+ CTCCGAGTTTTC
JMFF016L09+ TCCGAGTTTTC
____________________________________________________________
consensus CCTTTGGAAAACAATAACCCAAGCTCCCTTTCAACTTCACTCTGGTTCCTCCGAGTTTTC
. : . : . : . : . : . :
rJMFF009M13- ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACAGGGCTTCGACGTTTCCCT
rJMSF007G08- ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
rJMFF016L09- ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACAGGGCTTCGACGTTTCCCT
rJMFF031G11- ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
JMFF043O18+ ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
JMFF009M13+ ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
JMFF016L09+ ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
JMFF026H24+ CCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
JMFF024A21+ CCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
JMFF031G11+ CCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
____________________________________________________________
consensus ATCGTACACAACTGGTTTTCCCTATGAGTTAGTACATACACA-GGCTTCGACGTTTCCCT
. : . : . : . : . : . :
rJMFF009M13- CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGNTGAAGATGCCT
rJMSF007G08- CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
rJMFF016L09- CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
rJMFF031G11- CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
JMFF043O18+ CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
JMFF009M13+ CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
JMFF016L09+ CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
JMFF026H24+ CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
JMFF024A21+ CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
JMFF031G11+ CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
____________________________________________________________
consensus CCAAGGATTAGCCTCCAGCACATCATAGCTGCTGCTATCAAAACCCTGTTGAAGATGCCT
. : . : . : . : . : . :
rJMFF009M13- CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAA
rJMSF007G08- CCGCATGTCGTANGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
rJMFF016L09- CCGCATGTCGTANGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGGAAA
rJMFF031G11- CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
JMFF043O18+ CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
JMFF009M13+ CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
JMFF016L09+ CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
JMFF026H24+ CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
JMFF024A21+ CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
JMFF031G11+ CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
____________________________________________________________
consensus CCGCATGTCGTAGGCGCGTGACGACACTTGCTTTACAAACTCGCTCGGAGTCCCCGG-AA
. : . : . : . : . : . :
rJMSF007G08- TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTC
rJMFF016L09- TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCG
rJMFF031G11- TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGANCTTCTTCTT
JMFF043O18+ TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGACCTTCTTCTT
JMFF009M13+ TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGACCTTCTTCTT
JMFF016L09+ TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGACCTTCTTCTT
JMFF026H24+ TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGACCTTCTTCTT
JMFF024A21+ TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGACCTTCTTCTT
JMFF031G11+ TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGACCTTCTTCTT
____________________________________________________________
consensus TAGTACCGTCCATTCGAAGCGCACTCTCCACCTCCTCATCTCGCCGCCGACCTTCTTCTT
. : . : . : . : . : . :
rJMFF031G11- CTANGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCG
JMFF043O18+ CTAGGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCGCCTTCTCCGCCGCCTA
JMFF009M13+ CTAGGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCGCCTTCTCCGCCGCCTA
JMFF016L09+ CTAGGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCGCCTTCTCCGCCGCCTA
JMFF026H24+ CTAGGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCGCCTTCTCCGCCGCCTA
JMFF024A21+ CTAGGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCGCCTTCTCCGCCGCCTA
JMFF031G11+ CTAGGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCGCCTTCTCCGCCGCCTA
JMSF007G08+ TCTCCGCCGCCTA
____________________________________________________________
consensus CTAGGTCGTCTCGCCGCCGACCTTCTTCTTCTAGGTCGTCTCCGCCTTCTCCGCCGCCTA
. : . : . : . : . : . :
JMFF043O18+ ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
JMFF009M13+ ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
JMFF016L09+ ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
JMFF026H24+ ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
JMFF024A21+ ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
JMFF031G11+ ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
JMSF007G08+ ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
____________________________________________________________
consensus ATTTACAATAAGCTTCCGCCAGTGTTCTCCTCCGATCGATGCCATCACTGGTACGCCCGA
. : . : . : . : . : . :
JMFF043O18+ ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
JMFF009M13+ ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
JMFF016L09+ ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
JMFF026H24+ ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
JMFF024A21+ ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
JMFF031G11+ ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
JMSF007G08+ ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
____________________________________________________________
consensus ACGAGCTGCGCGGAATACCGGAGGAGAAGGATAGGCGTAACTGACGAGCGAGCTTAACCT
. : . : . : . : . : . :
JMFF043O18+ TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
JMFF009M13+ TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
JMFF016L09+ TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
JMFF026H24+ TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
JMFF024A21+ TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
JMFF031G11+ TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
JMSF007G08+ TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
____________________________________________________________
consensus TGGAGGACACAGATATTCGCCGCCGGTGATGATGGTGCCGGAGAGGCTTTCCGGGAGGGA
. : . : . : . : . : . :
JMFF043O18+ GAACGAACGACGGCGATACCGACGAGAGTGAATCCATGATCCGAAATCCAAATCTCAGAA
JMFF009M13+ GAACGAACGACGGCGATACCGACGAGAGAGAATCCATGATCCGAAATCCAAATCTCAGAA
JMFF016L09+ GAACGAACGACGGCGATACCGACGAGAGAGAATCCATGATCCGAAATCCAAATCTCAGAA
JMFF026H24+ GAACGAACGACGGCGATACCGACGAGAGAGAATCCATGATCCGAAATCCAAATCTCAGAA
JMFF024A21+ GAACGAACGACGGCGATACCGACGAGAGAGAATCCATGATCCGAAATCCAAATCTCAGAA
JMFF031G11+ GAACGAACGACGGCGATACCGACGAGAGAGAATCCATGATCCGAAATCCAAATCTCAGAA
JMSF007G08+ GAACGAACGACGGCGATACCGACGAGAGAGAATCCATGATCCGAAATCCAAATCTCAGAA
____________________________________________________________
consensus GAACGAACGACGGCGATACCGACGAGAGAGAATCCATGATCCGAAATCCAAATCTCAGAA
. : . : . : . : . : . :
JMFF043O18+ CAACGATT
JMFF009M13+ CAACGATTGCTTTCCT
JMFF016L09+ CAACGATTGCTTTCCT
JMFF026H24+ CAACGATTGCTT
JMFF024A21+ CAACGATT
JMFF031G11+ CAACGATTGCTTTCCT
JMSF007G08+ CAACGATTGCTTTCCTCAACACTCCACACTCAGATCCAATATATGGAACGAAAGTAGAGG
____________________________________________________________
consensus CAACGATTGCTTTCCTCAACACTCCACACTCAGATCCAATATATGGAACGAAAGTAGAGG
. : . : . : . : . : . :
JMSF007G08+ GAATTCGATACGTAACAGAAAACGGATTGGAATTGAAGAACGGAGAGGGTTGGAAGGTCC
____________________________________________________________
consensus GAATTCGATACGTAACAGAAAACGGATTGGAATTGAAGAACGGAGAGGGTTGGAAGGTCC