Contig 002090:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002I15Sequence551002090 (13)emb|CDP15036.1|1e-69unnamed protein product [Coffea canephora]719005381 (8)ref|XP_004242844.1|1e-134PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Solanum lyco
JMFF005C02Sequence573002090 (13)emb|CDP15036.1|7e-82unnamed protein product [Coffea canephora]715005381 (8)ref|XP_003525646.1|1e-118PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max]
JMFF006O19Sequence572002090 (13)emb|CDP15036.1|4e-77unnamed protein product [Coffea canephora]
JMFF015M23Sequence561002090 (13)emb|CDP15036.1|1e-78unnamed protein product [Coffea canephora]736005381 (8)ref|XP_003525624.1|9e-124PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max]
JMFF024B13Sequence388002090 (13)emb|CDP15036.1|7e-34unnamed protein product [Coffea canephora]
JMFF028A23Sequence544002090 (13)emb|CDP15036.1|1e-69unnamed protein product [Coffea canephora]779013737 (287)dbj|BAF46309.1|1e-72lipid transfer protein 3 precursor [Ipomoea nil]
JMFF030L02Sequence386002090 (13)emb|CDP15036.1|1e-34unnamed protein product [Coffea canephora]678013737 (287)dbj|BAF46309.1|3e-73lipid transfer protein 3 precursor [Ipomoea nil]
JMFF033D23Sequence562002090 (13)emb|CDP15036.1|1e-78unnamed protein product [Coffea canephora]688005381 (8)ref|XP_003525646.1|2e-111PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max]
JMFF046O15Sequence581002090 (13)emb|CDP15036.1|8e-77unnamed protein product [Coffea canephora]519005381 (8)ref|XP_003525646.1|2e-84PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Glycine max]
JMFF048L16Sequence496002090 (13)emb|CDP15036.1|4e-64unnamed protein product [Coffea canephora]331005381 (8)emb|CAB71134.1|1e-21putative proteasome regulatory subunit [Cicer arietinum]
JMFN005H03Sequence632002090 (13)emb|CDP15036.1|9e-103unnamed protein product [Coffea canephora]
JMSF006M10Sequence318002090 (13)emb|CDP15036.1|2e-30unnamed protein product [Coffea canephora]148005381 (8)emb|CAB71134.1|9e-19putative proteasome regulatory subunit [Cicer arietinum]
JMSF038A13Sequence668002090 (13)emb|CDP15036.1|4e-101unnamed protein product [Coffea canephora]804005381 (8)ref|XP_004242844.1|1e-141PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog [Solanum lyco

Alignment

This contig is upended


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JMFN005H03+                                                  TCTTGAAGTTGCGGGTGNACA
JMSF038A13+                                                               GGTGGACA
                      ____________________________________________________________
consensus                                                    TCTTGAAGTTGCGGGTGGACA
 
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JMFN005H03+           TGCAGAAGAGTCCTTCGTAGACCTTCAACCGGTTCTTTCTTTCCCAGTCACCACCTTCTT
JMFF005C02+                                                                    CTT
JMSF038A13+           TGCAGAAGAGTCCTTCGTAGACCTTCAACCGGTTCTTTCTTTCCCAGTCACCACCTTCTT
                      ____________________________________________________________
consensus             TGCAGAAGAGTCCTTCGTAGACCTTCAACCGGTTCTTTCTTTCCCAGTCACCACCTTCTT
 
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JMFN005H03+           CAAATAGGTTCTNTGCTCTATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
JMFF046O15+                             TATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
JMFF005C02+           CAAATAGGTTCTTTGCTCTATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
JMFF006O19+                         GCTCTATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
JMFF033D23+                   TTCTTTGCTCTATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
JMFF015M23+                    TCTTTGCTCTATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
JMFF028A23+                                                           CCATGTCAAAGA
JMFF002I15+                                                           CCATGTCAAAGA
JMSF038A13+           CAAATAGGTTCTTTGCTCTATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
                      ____________________________________________________________
consensus             CAAATAGGTTCTTTGCTCTATCAATGCTTTTAGAAATAAGGTCGAAGTCCATGTCAAAGA
 
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JMFN005H03+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF046O15+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF005C02+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF006O19+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF033D23+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF015M23+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF028A23+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF048L16+                         GTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMFF002I15+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
JMSF038A13+           AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
                      ____________________________________________________________
consensus             AACCCATCTGGAGTGTATAAAATACCAAGTCCATTTTCTGCCCAACAGCCACAGTTTTGC
 
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JMFN005H03+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF046O15+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF005C02+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF006O19+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF033D23+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF015M23+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF028A23+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF048L16+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMFF002I15+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
JMSF038A13+           TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
                      ____________________________________________________________
consensus             TCTCTGTTACCTTGAGCTGTTCCAGGGCTTTATCCTTGTCACCAATACGAATGAAAAATA
 
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JMFN005H03+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF046O15+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF005C02+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF006O19+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF033D23+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF015M23+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF028A23+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF048L16+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF024B13+                                          ACTTTCCCCCAAATTCTCTTCTGCATCAG
JMFF030L02+                                     ACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMFF002I15+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
JMSF038A13+           GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
                      ____________________________________________________________
consensus             GGGATTTTGCCAGATGGGCCTCCCTGACCTCACTTTCCCCCAAATTTTCTTCTGCATCAG
 
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JMFN005H03+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF046O15+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF005C02+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF006O19+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF033D23+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF015M23+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF028A23+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF048L16+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF024B13+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF030L02+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMFF002I15+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMSF038A13+           CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
JMSF006M10+                                                     CCCGCATCGAATCGAGCA
                      ____________________________________________________________
consensus             CAATCTTTTCGTCAAGCTTTTTGAGCTCCTCGTCAATCTTAGCCCGCATCGAATCGAGCA
 
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JMFN005H03+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF046O15+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF005C02+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF006O19+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF033D23+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF015M23+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF028A23+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF048L16+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF024B13+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF030L02+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMFF002I15+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMSF038A13+           CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
JMSF006M10+           CCTTNTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
                      ____________________________________________________________
consensus             CCTTCTGATCCAAATTCAGTACCGAGTTCGCGATTAGGGTTTGGTACAAGGGAGCCATAT
 
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JMFN005H03+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF046O15+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF005C02+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF006O19+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCAA
JMFF033D23+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF015M23+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF028A23+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF048L16+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF024B13+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF030L02+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMFF002I15+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMSF038A13+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
JMSF006M10+           CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
                      ____________________________________________________________
consensus             CATTGGCGACGACGGCATTGAAGACCTCGTCGCGGAGGCGAACTTTCTGCAGGTCGTCGA
 
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JMFN005H03+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF046O15+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF005C02+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF006O19+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF033D23+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF015M23+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF028A23+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF048L16+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF024B13+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF030L02+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMFF002I15+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMSF038A13+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
JMSF006M10+           CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
                      ____________________________________________________________
consensus             CGTCGGGGTGGGTGAGCAGAAAGATTTTGTTGGCTAGAATTAGCTGTTGTGTCTGCGTTC
 
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JMFN005H03+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF046O15+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF005C02+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF006O19+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF033D23+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF015M23+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF028A23+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF048L16+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF024B13+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF030L02+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMFF002I15+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMSF038A13+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
JMSF006M10+           CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
                      ____________________________________________________________
consensus             CTTCTTCACCTTCCATGGCTGATTTCGCTTCTCTTTGATCTCTAAACTCCTCGTTCCTCT
 
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JMFN005H03+           GGAGAAGAGAG                                                 
JMFF046O15+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGCTGAGGTTT    
JMFF005C02+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCAC                              
JMFF006O19+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAA               
JMFF033D23+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCAC                              
JMFF015M23+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCAC                              
JMFF028A23+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGCTGAG        
JMFF048L16+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCAC                              
JMFF024B13+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGCTGAGGTTTTC  
JMFF030L02+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGC            
JMFF002I15+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGCTGAGGTTTTC  
JMSF038A13+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGCTGAGGTTTTC  
JMSF006M10+           GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGCTGAGGTTTTCTC
                      ____________________________________________________________
consensus             GGAGAAGAGAGCTTGCTTGCTTGCTTGCACAAAAGGAAAAGTGAACGCTGAGGTTTTCTC