| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS152B03 | Sequence | 621 | 002086 (6) | ref|XP_004238449.1| | 7e-65 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | |||||
| JMSF006E01 | Sequence | 388 | 002086 (6) | ref|XP_009766636.1| | 5e-15 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 152 | 002788 (7) | ref|XP_004238449.1| | 3e-11 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun |
| JMSF010J11 | Sequence | 346 | 002086 (6) | ref|XP_010686819.1| | 6e-13 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 711 | 002788 (7) | ref|XP_007018113.1| | 3e-65 | Ribophorin I isoform 1 [Theobroma cacao] ref|XP_007018114.1| Ribophorin I isofor |
| JMSF022J16 | Sequence | 611 | 002086 (6) | ref|XP_004238449.1| | 2e-60 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 775 | 002788 (7) | ref|XP_007018113.1| | 6e-70 | Ribophorin I isoform 1 [Theobroma cacao] ref|XP_007018114.1| Ribophorin I isofor |
| JMSF040O03 | Sequence | 611 | 002086 (6) | ref|XP_004238449.1| | 1e-59 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 910 | 002788 (7) | ref|XP_009595869.1| | 7e-88 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun |
| JMSF042K03 | Sequence | 778 | 002086 (6) | ref|XP_004238449.1| | 2e-100 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun | 708 | 002788 (7) | ref|XP_011100198.1| | 8e-26 | PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun |
This contig is upended
. : . : . : . : . : . :
JMSF042K03+ TGCACATTTCCCCAATGCGA
____________________________________________________________
consensus TGCACATTTCCCCAATGCGA
. : . : . : . : . : . :
JMSF042K03+ GATTTCTATCTCTCGCACCAACTGCTCAGCAACTGCAAACGGCTTATTGCTTACGAAGTG
____________________________________________________________
consensus GATTTCTATCTCTCGCACCAACTGCTCAGCAACTGCAAACGGCTTATTGCTTACGAAGTG
. : . : . : . : . : . :
JMSF042K03+ AACAGCTATATGCTGGAATGAGAATGGAGGAATATTTTGATAAGGTCCATACTTAAGCTC
____________________________________________________________
consensus AACAGCTATATGCTGGAATGAGAATGGAGGAATATTTTGATAAGGTCCATACTTAAGCTC
. : . : . : . : . : . :
JMFS152B03+ AGAACTTGGTGTTTTCGAGTTTGGTATAAGCTTCAACCTTTGGCTCAGGTAG
JMSF022J16+ TTGGTATAAGCTTCAACCTTTGGCTCAGGTAG
JMSF042K03+ TGAACCAGAGAACTTGGTGTTTTCGAGTTTGGTATAAGCTTCAACCTTTGGCTCAGGTAG
JMSF040O03+ TTGGTATAAGCTTCAACCTTTGGCTCAGGTAG
____________________________________________________________
consensus TGAACCAGAGAACTTGGTGTTTTCGAGTTTGGTATAAGCTTCAACCTTTGGCTCAGGTAG
. : . : . : . : . : . :
JMFS152B03+ CTTAACAGTGAGAGATTGGGCCTCGACAGAATAAGGAGAGAGATAATGAGCACTATCCTG
JMSF022J16+ CTTAACAGTGAGAGATTGGGCCTCGACAGAATAAGGAGAGAGATAATGAGCACTATCCTG
JMSF042K03+ CTTAACAGTGAGAGATTGGGCCTCGACAGAATAAGGAGAGAGATAATGAGCACTATCCTG
JMSF040O03+ CTTAACAGTGAGAGATTGGGCCTCGACAGAATAAGGAGAGAGATAATGAGCACTATCCTG
____________________________________________________________
consensus CTTAACAGTGAGAGATTGGGCCTCGACAGAATAAGGAGAGAGATAATGAGCACTATCCTG
. : . : . : . : . : . :
JMFS152B03+ GAACACAAGAAGCTGTAGCTCAGCCTGAGTAATTTTCTCAGGGAATGGCTGCAATGAGTG
JMSF022J16+ GAACACAAGAAGCTGTAGCTCAGCCTGAGTAATTTTCTCAGGGAATGGCTGCAATGAGTG
JMSF042K03+ GAACACAAGAAGCTGTAGCTCAGCCTGAGTAATTTTCTCAGGGAATGGCTGCAATGAGTG
JMSF040O03+ GAACACAAGAAGCTGTAGCTCAGCCTGAGTAATTTTCTCAGGGAATGGCTGCAATGAGTG
____________________________________________________________
consensus GAACACAAGAAGCTGTAGCTCAGCCTGAGTAATTTTCTCAGGGAATGGCTGCAATGAGTG
. : . : . : . : . : . :
JMFS152B03+ GGTGAATACAGCCTTGACCTCCAAAGTTAAGCTCTCTCCCTTGCCTAGTTTGCTAGGCAG
JMSF022J16+ GGTGAATACAGCCTTGACCTCCAAAGTTAAGCTCTCTCCCTTGCCTAGTTTGCTAGGCAG
JMSF042K03+ GGTGAATACAGCCTTGACCTCCAAAGTTAAGCTCTCTCCCTTGCCTAGTTTGCTAGGCAG
JMSF040O03+ GGTGAATACAGCCTTGACCTCCAAAGTTAAGCTCTCTCCCTTGCCTAGTTTGCTAGGCAG
____________________________________________________________
consensus GGTGAATACAGCCTTGACCTCCAAAGTTAAGCTCTCTCCCTTGCCTAGTTTGCTAGGCAG
. : . : . : . : . : . :
JMFS152B03+ AGATACAGCATACCAAGTCAGCCCTGGGGGCACTCCATCAGGATTGGCAACTTTAAGAGG
JMSF022J16+ AGATACAGCATACCAAGTCAGCCCTGGGGGCACTCCATCAGGATTGGCAACTTTAAGAGG
JMSF042K03+ AGATACAGCATACCAAGTCAGCCCTGGGGGCACTCCATCAGGATTGGCAACTTTAAGAGG
JMSF040O03+ AGATACAGCATACCAAGTCAGCCCTGGGGGCACTCCATCAGGATTGGCAACTTTAAGAGG
JMSF010J11+ TTTAAGAGG
JMSF006E01+ CTCCATCAGGATTGGCAACTTTAAGAGG
____________________________________________________________
consensus AGATACAGCATACCAAGTCAGCCCTGGGGGCACTCCATCAGGATTGGCAACTTTAAGAGG
. : . : . : . : . : . :
JMFS152B03+ GAGGTTACTTGAAGAAGTTTTACTTTTCCCTTTCCCTTCACTAGTCGTTACCCTCAGGAA
JMSF022J16+ GAGGTTACTTGAAGAAGTTTTACTTTTCCCTTTCCCTTCACTAGTCGTTACCCTCAGGAA
JMSF042K03+ GAGGTTACTTGAAGAAGTTTTACTTTTCCCTTTCCCTTCACTAGTCGTTACCCTCAGGAA
JMSF040O03+ GAGGTTACTTGAAGAAGTTTTACTTTTCCCTTTCCCTTCACTAGTCGTTACCCTCAGGAA
JMSF010J11+ GAGGTTACTTGAAGAAGTTTTACTTTTCCCTTTCCCTTCACTAGTCGTTACCCTCAGGAA
JMSF006E01+ GAGGTTACTTGAAGAAGTTTTACTTTTCCCTTTCCCTTCACTAGTCGTTACCCTCAGGAA
____________________________________________________________
consensus GAGGTTACTTGAAGAAGTTTTACTTTTCCCTTTCCCTTCACTAGTCGTTACCCTCAGGAA
. : . : . : . : . : . :
JMFS152B03+ TGCCAAGTTCTTTGCCACGACGTCAGGGAAAGGTAACAAGACCTCTGACGCAGGATCATT
JMSF022J16+ TGCCAAGTTCTTTGCCACGACGTCAGGGAAAGGTAACAAGACCTCTGACGCAGGATCATT
JMSF042K03+ TGCCAAGTTCTTTGCCACGACGTCAGGGAAAGGTAACAAGACCTCTGACGCAGGATCATT
JMSF040O03+ TGCCAAGTTCTTTGCCACGACGTCAGGGAAAGGTAACAAGACCTCTGACGCAGGATCATT
JMSF010J11+ TGCCAAGTTCTTTGCCACGACGTCAGGGAAAGGTAACAAGACCTCTGACGCAGGATCATT
JMSF006E01+ TGCCAAGTTCTTTGCCACGACGTCAGGGAAAGGTAACAAGACCTCTGACGCAGGATCATT
____________________________________________________________
consensus TGCCAAGTTCTTTGCCACGACGTCAGGGAAAGGTAACAAGACCTCTGACGCAGGATCATT
. : . : . : . : . : . :
JMFS152B03+ ACCAGCATTTTCAACCTTCAAAGTGGTAGTGCTCCTCACTATGTGGGATGTCAAATCAAT
JMSF022J16+ ACCAGCATTTTCAACCTTCAAAGTGGTAGTGCTCCTCACTATGTGGGATGTCAAATCAAT
JMSF042K03+ ACCAGCATTTTCAACCTTCAAAGTGGTAGTGCTCCTCACTATGTGGGATGTCAAATCAAT
JMSF040O03+ ACCAGCATTTTCAACCTTCAAAGTGGTAGTGCTCCTCACTATGTGGGATGTCAAATCAAT
JMSF010J11+ ACCAGCATTTTCAACCTTCAAAGTGGTAGTGCTCCTCACTATGTGGGATGTCAAATCAAT
JMSF006E01+ ACCAGCATTTTCAACCTTCAAAGTGGTAGTGCTCCTCACTATGTGGGATGTCAAATCAAT
____________________________________________________________
consensus ACCAGCATTTTCAACCTTCAAAGTGGTAGTGCTCCTCACTATGTGGGATGTCAAATCAAT
. : . : . : . : . : . :
JMFS152B03+ CTTTCGATCAGCCTTGGAGATGATCAGATCGGAAAGAACAGATGAAGAGAGAACACATAA
JMSF022J16+ CTTTCGATCAGCCTTGGAGATGATCAGATCGGAAAGAACAGATGAAGAGAGAACACATAA
JMSF042K03+ CTTTCGATCAGCCTTGGAGATGATCAGATCGGAAAGAACAGATGAAGAGAGAACACATAA
JMSF040O03+ CTTTCGATCAGCCTTGGAGATGATCAGATCGGAAAGAACAGATGAAGAGAGAACACATAA
JMSF010J11+ CTTTCGATCAGCCTTGGAGATGATCAGATCGGAAAGAACAGATGAAGAGAGAACACATAA
JMSF006E01+ CTTTCGATCAGCCTTGGAGATGATCAGATCGGAAAGAACAGATGAAGAGAGAACACATAA
____________________________________________________________
consensus CTTTCGATCAGCCTTGGAGATGATCAGATCGGAAAGAACAGATGAAGAGAGAACACATAA
. : . : . : . : . : . :
JMFS152B03+ ACAGAAAATGAAAAGAAATGGATCGCGGTGAATCTTTCTCATTTTCTATATCTCTTCTTC
JMSF022J16+ ACAGAAAATGAAAAGAAATGGATCGCGGTGAATCTTTCTCATTTTCTATATCTCTTCTTC
JMSF042K03+ ACAGAAAATGAAAAGAAATGGATCGCGGTGAATCTTTCTCATTTTCTATATCTCTTCTTC
JMSF040O03+ ACAGAAAATGAAAAGAAATGGATCGCGGTGAATCTTTCTCATTTTCTATATCTCTTCTTC
JMSF010J11+ ACAGAAAATGAAAAGAAATGGATCGCGGTGAATCTTTCTCATTTTCTATATCTCTTCTTC
JMSF006E01+ ACAGAAAATGAAAAGAAATGGATCGCGGTGAATCTTTCTCATTTTCTATATCTCTTCTTC
____________________________________________________________
consensus ACAGAAAATGAAAAGAAATGGATCGCGGTGAATCTTTCTCATTTTCTATATCTCTTCTTC
. : . : . : . : . : . :
JMFS152B03+ TTCTTCGGAGCACACTGCACTTAGATCGA
JMSF022J16+ TTCTTCGGAGCACACTGCACTTAGATCGACTTCCCC
JMSF042K03+ TTCTTCGGAGCACACTGCACTTAGATCGACTTCCCC
JMSF040O03+ TTCTTCGGAGCACACTGCACTTAGATCGACTTCCCC
JMSF010J11+ TTCTTCGGAGCACACTGCACTTAGATCGACTTCCCC
JMSF006E01+ TTCTTCGGAGCACACTGCACTTAGATCGACTTCCCCAGGGTGAACTGTGAAAGTCGCTCC
____________________________________________________________
consensus TTCTTCGGAGCACACTGCACTTAGATCGACTTCCCCAGGGTGAACTGTGAAAGTCGCTCC