| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010J21 | Sequence | 590 | 002084 (9) | ref|XP_009613216.1| | 283 | PREDICTED: uncharacterized protein LOC104106380 [Nicotiana tomentosiformis] | 785 | 002084 (9) | ref|XP_009795259.1| | 249 | PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris] |
| JMFF026I18 | Sequence | 526 | 002084 (9) | ref|XP_006350403.1| | 211 | PREDICTED: uncharacterized protein LOC102606317 [Solanum tuberosum] | 727 | 002084 (9) | ref|XP_009795259.1| | 288 | PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris] |
| JMSF005M19 | Sequence | 334 | 002084 (9) | ref|XP_009613216.1| | 94.7 | PREDICTED: uncharacterized protein LOC104106380 [Nicotiana tomentosiformis] | 297 | 007128 (7) | ref|XP_006857727.1| | 4e-20 | hypothetical protein AMTR_s00061p00182310 [Amborella trichopoda] gb|ERN19194.1| |
| JMSF009B11 | Sequence | 217 | 002084 (9) | 777 | 002084 (9) | ref|XP_009795259.1| | 380 | PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris] | |||
| JMSF050C20 | Sequence | 635 | 002084 (9) | ref|XP_009613216.1| | 276 | PREDICTED: uncharacterized protein LOC104106380 [Nicotiana tomentosiformis] | 719 | 002084 (9) | ref|XP_009795259.1| | 296 | PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF026I18- ATTGTGTATCAGCAGTGCCAATAAC
rJMFF010J21- AAACCCTATAAAATTGTGTATCAGCAGTGCCAATAAC
____________________________________________________________
consensus AAACCCTATAAAATTGTGTATCAGCAGTGCCAATAAC
. : . : . : . : . : . :
rJMFF026I18- AATGGTGATTTAGCACTGCATTACATTACAATGAAGTATAAGTTGGTGTTATAGCTCTTG
rJMFF010J21- AATGGTGATTTAGCACTGCATTACATTACAATGAAGTATAAGTTGGTGTTATAGCTTTTG
rJMSF050C20- AATGAAGTATAAGTTGGTGTTATAGCTTTTG
____________________________________________________________
consensus AATGGTGATTTAGCACTGCATTACATTACAATGAAGTATAAGTTGGTGTTATAGCTTTTG
. : . : . : . : . : . :
rJMFF026I18- AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
rJMFF010J21- AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
rJMSF050C20- AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
rJMSF009B11- CTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
____________________________________________________________
consensus AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
. : . : . : . : . : . :
rJMFF026I18- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCCCAAAAACTGTATGACTAAATA
rJMFF010J21- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
rJMSF050C20- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
rJMSF009B11- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
____________________________________________________________
consensus AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
. : . : . : . : . : . :
rJMFF026I18- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
rJMFF010J21- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
rJMSF050C20- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
rJMSF009B11- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
____________________________________________________________
consensus CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
. : . : . : . : . : . :
rJMFF026I18- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
rJMFF010J21- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
rJMSF050C20- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
rJMSF009B11- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
____________________________________________________________
consensus GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
. : . : . : . : . : . :
rJMFF026I18- GGTGAATCTTATCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
rJMFF010J21- GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
rJMSF050C20- GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
rJMSF009B11- GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
____________________________________________________________
consensus GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
. : . : . : . : . : . :
rJMFF026I18- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
rJMFF010J21- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
rJMSF050C20- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
rJMSF009B11- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
____________________________________________________________
consensus GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
. : . : . : . : . : . :
rJMFF026I18- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
rJMFF010J21- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
rJMSF050C20- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
rJMSF009B11- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
JMFF010J21+ TTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
JMSF050C20+ TGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
____________________________________________________________
consensus GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
. : . : . : . : . : . :
rJMFF026I18- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
rJMFF010J21- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
rJMSF050C20- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
rJMSF009B11- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
JMFF010J21+ GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
JMSF050C20+ GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
____________________________________________________________
consensus GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
. : . : . : . : . : . :
rJMFF026I18- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
rJMFF010J21- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
rJMSF050C20- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
rJMSF009B11- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
JMFF010J21+ GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
JMSF050C20+ GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
JMFF026I18+ ACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
____________________________________________________________
consensus GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
. : . : . : . : . : . :
rJMFF026I18- TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
rJMFF010J21- TGTGGGGTTTTCCAATGCATCTGTTATCCACAGGGGGCCTGTTGTACTTTTCTCGACCAG
rJMSF050C20- TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
rJMSF009B11- TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
JMFF010J21+ TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
JMSF050C20+ TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
JMFF026I18+ TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
____________________________________________________________
consensus TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
. : . : . : . : . : . :
rJMFF026I18- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATA
rJMFF010J21- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCC
rJMSF050C20- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAATGGGGGCGG
rJMSF009B11- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
JMFF010J21+ TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
JMSF050C20+ TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
JMFF026I18+ TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
____________________________________________________________
consensus TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
. : . : . : . : . : . :
rJMSF050C20- TTGCTCTCGCGAAGTTCTATGATGTCCTT
rJMSF009B11- TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMFF010J21+ TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMSF050C20+ TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMFF026I18+ TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMSF005M19+ CTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
____________________________________________________________
consensus TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
. : . : . : . : . : . :
rJMSF009B11- GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMFF010J21+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMSF050C20+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMFF026I18+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMSF005M19+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
____________________________________________________________
consensus GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
. : . : . : . : . : . :
rJMSF009B11- TTGTCAGCATCTGATCTTT
JMFF010J21+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMSF050C20+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMFF026I18+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMSF009B11+ TTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMSF005M19+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
____________________________________________________________
consensus TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
. : . : . : . : . : . :
JMFF010J21+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMSF050C20+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMFF026I18+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMSF009B11+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMSF005M19+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
____________________________________________________________
consensus TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
. : . : . : . : . : . :
JMFF010J21+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMSF050C20+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMFF026I18+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMSF009B11+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMSF005M19+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
____________________________________________________________
consensus AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
. : . : . : . : . : . :
JMFF010J21+ T
JMSF050C20+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCT
JMFF026I18+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCT
JMSF009B11+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCT
JMSF005M19+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCTGCCTAGCC
____________________________________________________________
consensus TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCTGCCTAGCC