Contig 002084:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010J21Sequence590002084 (9)ref|XP_009613216.1|283PREDICTED: uncharacterized protein LOC104106380 [Nicotiana tomentosiformis]785002084 (9)ref|XP_009795259.1|249PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris]
JMFF026I18Sequence526002084 (9)ref|XP_006350403.1|211PREDICTED: uncharacterized protein LOC102606317 [Solanum tuberosum]727002084 (9)ref|XP_009795259.1|288PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris]
JMSF005M19Sequence334002084 (9)ref|XP_009613216.1|94.7PREDICTED: uncharacterized protein LOC104106380 [Nicotiana tomentosiformis]297007128 (7)ref|XP_006857727.1|4e-20hypothetical protein AMTR_s00061p00182310 [Amborella trichopoda] gb|ERN19194.1|
JMSF009B11Sequence217002084 (9)777002084 (9)ref|XP_009795259.1|380PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris]
JMSF050C20Sequence635002084 (9)ref|XP_009613216.1|276PREDICTED: uncharacterized protein LOC104106380 [Nicotiana tomentosiformis]719002084 (9)ref|XP_009795259.1|296PREDICTED: uncharacterized protein LOC104241984 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF026I18- ATTGTGTATCAGCAGTGCCAATAAC
rJMFF010J21- AAACCCTATAAAATTGTGTATCAGCAGTGCCAATAAC
                      ____________________________________________________________
consensus AAACCCTATAAAATTGTGTATCAGCAGTGCCAATAAC
 
. : . : . : . : . : . :
rJMFF026I18- AATGGTGATTTAGCACTGCATTACATTACAATGAAGTATAAGTTGGTGTTATAGCTCTTG
rJMFF010J21- AATGGTGATTTAGCACTGCATTACATTACAATGAAGTATAAGTTGGTGTTATAGCTTTTG
rJMSF050C20- AATGAAGTATAAGTTGGTGTTATAGCTTTTG
                      ____________________________________________________________
consensus AATGGTGATTTAGCACTGCATTACATTACAATGAAGTATAAGTTGGTGTTATAGCTTTTG
 
. : . : . : . : . : . :
rJMFF026I18- AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
rJMFF010J21- AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
rJMSF050C20- AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
rJMSF009B11- CTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
                      ____________________________________________________________
consensus AGTGTATGTAGTTGATACAACTTCATCAATAATACTTACAGATATAGAACAGAAGCACTT
 
. : . : . : . : . : . :
rJMFF026I18- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCCCAAAAACTGTATGACTAAATA
rJMFF010J21- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
rJMSF050C20- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
rJMSF009B11- AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
                      ____________________________________________________________
consensus AACATGGGGGAAACACAATGTTACTTACAAGGTTGTCCTCAAAAACTGTATGACTAAATA
 
. : . : . : . : . : . :
rJMFF026I18- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
rJMFF010J21- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
rJMSF050C20- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
rJMSF009B11- CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
                      ____________________________________________________________
consensus CACAACTGCCAGAAACAGTGCAATCTGATAGAAGTCTCTCTGGAAGTCGTCGTCCCTCTG
 
. : . : . : . : . : . :
rJMFF026I18- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
rJMFF010J21- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
rJMSF050C20- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
rJMSF009B11- GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
                      ____________________________________________________________
consensus GAAAAACTTTGTTGGATCACTATAGGAGTCTGGATAAACCTCCATGTTTTTGTTTTCTGT
 
. : . : . : . : . : . :
rJMFF026I18- GGTGAATCTTATCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
rJMFF010J21- GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
rJMSF050C20- GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
rJMSF009B11- GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
                      ____________________________________________________________
consensus GGTGAATCTTCTCGTCACCTCCTTCACAAAGTCTGCAGTGTCCTTCCCGGCCTCGATGCT
 
. : . : . : . : . : . :
rJMFF026I18- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
rJMFF010J21- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
rJMSF050C20- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
rJMSF009B11- GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
                      ____________________________________________________________
consensus GGCATACAGTCGCCTCGATGTCCAGAAATACGTTCGAGCAACGACAGATGATGACGATAA
 
. : . : . : . : . : . :
rJMFF026I18- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
rJMFF010J21- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
rJMSF050C20- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
rJMSF009B11- GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
JMFF010J21+ TTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
JMSF050C20+ TGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
                      ____________________________________________________________
consensus GTCCCACACTTCTTCATGCTCAACCACTTGCCCGCTGATCTGGTTCAGAGTGAACTTGGA
 
. : . : . : . : . : . :
rJMFF026I18- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
rJMFF010J21- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
rJMSF050C20- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
rJMSF009B11- GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
JMFF010J21+ GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
JMSF050C20+ GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
                      ____________________________________________________________
consensus GTCGACTTTGATTATAACATCACCCGCTATGCCAGCAAGAACAGATTTCGGTTTCCCTCT
 
. : . : . : . : . : . :
rJMFF026I18- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
rJMFF010J21- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
rJMSF050C20- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
rJMSF009B11- GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
JMFF010J21+ GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
JMSF050C20+ GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
JMFF026I18+ ACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
                      ____________________________________________________________
consensus GATTGTCCACTTGATGTTCAAGACACTGGTTGATAACATCACCATTTCTTGCACACTAGA
 
. : . : . : . : . : . :
rJMFF026I18- TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
rJMFF010J21- TGTGGGGTTTTCCAATGCATCTGTTATCCACAGGGGGCCTGTTGTACTTTTCTCGACCAG
rJMSF050C20- TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
rJMSF009B11- TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
JMFF010J21+ TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
JMSF050C20+ TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
JMFF026I18+ TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
                      ____________________________________________________________
consensus TGTGGGGTTTTCCAATGCATCTGTTATCCACA-GGGGCCTGTTGTACTTTTCTCGACCAG
 
. : . : . : . : . : . :
rJMFF026I18- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATA
rJMFF010J21- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCC
rJMSF050C20- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAATGGGGGCGG
rJMSF009B11- TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
JMFF010J21+ TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
JMSF050C20+ TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
JMFF026I18+ TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
                      ____________________________________________________________
consensus TGAAACTCCGGACCGGATCCTTGTATTTGACAGACACTGCATATGTTCCAAT-GGGGCGG
 
. : . : . : . : . : . :
rJMSF050C20- TTGCTCTCGCGAAGTTCTATGATGTCCTT
rJMSF009B11- TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMFF010J21+ TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMSF050C20+ TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMFF026I18+ TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
JMSF005M19+ CTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
                      ____________________________________________________________
consensus TTGCTCTCGCGAAGTTCTATGATGTCCTTGACAAGCAGCCTTGCAGTGGCTTCAACTGAG
 
. : . : . : . : . : . :
rJMSF009B11- GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMFF010J21+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMSF050C20+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMFF026I18+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
JMSF005M19+ GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
                      ____________________________________________________________
consensus GGGCTGCTAATGCACTCAAACTCATCGCAGAGTTGGCCGAAATCCATGCCATCTACCAGC
 
. : . : . : . : . : . :
rJMSF009B11- TTGTCAGCATCTGATCTTT
JMFF010J21+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMSF050C20+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMFF026I18+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMSF009B11+ TTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
JMSF005M19+ TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
                      ____________________________________________________________
consensus TTGTCAGCATCTGATCTTTCACTGGCAATAACATCAGAAGACAGCTTGCCTCTTTCTGAG
 
. : . : . : . : . : . :
JMFF010J21+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMSF050C20+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMFF026I18+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMSF009B11+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
JMSF005M19+ TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
                      ____________________________________________________________
consensus TCATTTGCAACTCGGATTGAAAACCTGGTGGGGTGATGAATGGTGGGAGAGGGTGATGAG
 
. : . : . : . : . : . :
JMFF010J21+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMSF050C20+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMFF026I18+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMSF009B11+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
JMSF005M19+ AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
                      ____________________________________________________________
consensus AGTGGCTTCGAGTGGCGATTAGCAGAGCCATGGAAGAAGGAACAGTGGGTGTGAAGGCTT
 
. : . : . : . : . : . :
JMFF010J21+ T
JMSF050C20+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCT
JMFF026I18+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCT
JMSF009B11+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCT
JMSF005M19+ TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCTGCCTAGCC
                      ____________________________________________________________
consensus TGAGCAGAAGAAGCAGCAACAGAAAACTGGGTCATCTCTTTCCCCCCATTCTGCCTAGCC