Contig 002078:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS074E10Sequence634002078 (6)ref|XP_009615653.1|2e-96PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061}
JMFS077G10Sequence624002078 (6)ref|XP_009615653.1|3e-94PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061}
JMFS138H03Sequence616002078 (6)ref|XP_009615653.1|7e-92PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061}
JMSF005B09Sequence232002078 (6)ref|XP_009615653.1|4e-07PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061} 460010169 (15)sp|P49332.1|GSTXC_TOBAC3e-36RecName: Full=Probable glutathione S-transferase parC; AltName: Full=Auxin-regu
JMSF023B10Sequence634002078 (6)ref|XP_009615653.1|9e-92PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061} 747010455 (3)ref|XP_010092922.1|2e-81GTP-binding protein TypA/BipA-like protein [Morus notabilis] gb|EXB52899.1| GTP-
JMSF046C10Sequence650002078 (6)ref|XP_009615653.1|7e-97PREDICTED: elongation factor G, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03061} 701010455 (3)gb|AFK47094.1|2e-97unknown [Lotus japonicus]

Alignment

This contig is upended


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JMFS074E10+                    TCAGAACGAATCTTGTCTGAGGCATTGGACCCTCTACAGAATCTACCACTA
JMFS138H03+                                      GAGGCATTGGACCCTCTACAGAATCTACCACTA
JMFS077G10+                                     TGAGGCATTGGACCCTCTACAGAATCTACCACTA
JMSF046C10+                     CAGAACGAATCTTGTCTGAGGCATTGGACCCTCTACAGAATCTACCACTA
JMSF023B10+                                     TGAGGCATTGGACCCTCTACAGAATCTACCACTA
                      ____________________________________________________________
consensus                      TCAGAACGAATCTTGTCTGAGGCATTGGACCCTCTACAGAATCTACCACTA
 
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JMFS074E10+           AAAGAACTCCTTCCACCATGTTAATGATGCGCTCCACTTCACCTCCAAAGTCTGAATGGC
JMFS138H03+           AAAGAACTCCTTCCACCATGTTAATGATGCGCTCCACTTCACCTCCAAAGTCTGAATGGC
JMFS077G10+           AAAGAACTCCTTCCACCATGTTAATGATGCGCTCCACTTCACCTCCAAAGTCTGAATGGC
JMSF046C10+           AAAGAACTCCTTCCACCATGTTAAGGATGCGCTCCACTTCACCTCCAAAGTCTGAATGGC
JMSF023B10+           AAAGAACTCCTTCCACCATGTTAATGATGCGCTCCACTTCACCTCCAAAGTCTGAATGGC
                      ____________________________________________________________
consensus             AAAGAACTCCTTCCACCATGTTAATGATGCGCTCCACTTCACCTCCAAAGTCTGAATGGC
 
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JMFS074E10+           CAGGAGTATCGATTATATTTATTTTGGTATTGTTGTAAGTAATTGAGGTGTTTTTGCTAA
JMFS138H03+           CAGGAGTATCGATTATATTTATTTTGGTATTGTTGTAAGTAATTGAGGTGTTTTTGCTAA
JMFS077G10+           CAGGAGTATCGATTATATTTATTTTGGTATTGTTGTAAGTAATTGAGGTGTTTTTGCTAA
JMSF046C10+           CAGGAGTATCGATTATATTTATTTTGGTATTGTTGTAAGTAATTGAGGTGTTTTTGCTAA
JMSF023B10+           CAGGAGTATCGATTATATTTATTTTGGTATTGTTGTAAGTAATTGAGGTGTTTTTGCTAA
                      ____________________________________________________________
consensus             CAGGAGTATCGATTATATTTATTTTGGTATTGTTGTAAGTAATTGAGGTGTTTTTGCTAA
 
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JMFS074E10+           GTATTGTTATTCCCCTTTCACGCTCCAGATCATTTGAATCCATTATCCTTTCCTGTACAA
JMFS138H03+           GTATTGTTATTCCCCTTTCACGCTCCAGATCATTTGAATCCATTATCCTTTCCTGTACAA
JMFS077G10+           GTATTGTTATTCCCCTTTCACGCTCCAGATCATTTGAATCCATTATCCTTTCCTGTACAA
JMSF046C10+           GTATTGTTATTCCCCTTTCACGCTCCAGATCATTTGAATCCATTATCCTTTCCTGTACAA
JMSF023B10+           GTATTGTTATTCCCCTTTCACGCTCCAGATCATTTGAATCCATTATCCTTTCCTGTACAA
                      ____________________________________________________________
consensus             GTATTGTTATTCCCCTTTCACGCTCCAGATCATTTGAATCCATTATCCTTTCCTGTACAA
 
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JMFS074E10+           ACTGATTGTCTCGAAACACCTTTGCTTGTCTCAACATCGCATCCACCAGTGTGGTCTTCC
JMFS138H03+           ACTGATTGTCTCGAAACACCTTTGCTTGTCTCAACATCGCATCCACCAGTGTGGTCTTCC
JMFS077G10+           ACTGATTGTCTCGAAACACCTTTGCTTGTCTCAACATCGCATCCACCAGTGTGGTCTTCC
JMSF046C10+           ACTGATTGTCTCGAAACACCTTTGCTTGTCTCAACATCGCATCCACCAGTGTGGTCTTCC
JMSF023B10+           ACTGATTGTCTCGAAACACCTTTGCTTGTCTCAACATCGCATCCACCAGTGTGGTCTTCC
                      ____________________________________________________________
consensus             ACTGATTGTCTCGAAACACCTTTGCTTGTCTCAACATCGCATCCACCAGTGTGGTCTTCC
 
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JMFS074E10+           CATGATCTACATGAGCCACAATCGCTATATTCCTTATGTCACTTCTCCTCATTAACTGGT
JMFS138H03+           CATGATCTACATGAGCCACAATCGCTATATTCCTTATGTCACTTCTCCTCATTAACTGGT
JMFS077G10+           CATGATCTACATGAGCCACAATCGCTATATTCCTTATGTCACTTCTCCTCATTAACTGGT
JMSF046C10+           CATGATCTACATGAGCCACAATCGCTATATTCCTTATGTCACTTCTCCTCATTAACTGGT
JMSF023B10+           CATGATCTACATGAGCCACAATCGCTATATTCCTTATGTCACTTCTCCTCATTAACTGGT
                      ____________________________________________________________
consensus             CATGATCTACATGAGCCACAATCGCTATATTCCTTATGTCACTTCTCCTCATTAACTGGT
 
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JMFS074E10+           TCTTTGTCTCAGTGGAGAGTTCAGCGGCCTGAGAAGCAGAGCATTTGATAGAACTCCGCA
JMFS138H03+           TCTTTGTCTCAGTGGAGAGTTCAGCGGCCTGAGAAGCAGAGCATTTGATAGAACTCCGCA
JMFS077G10+           TCTTTGTCTCAGTGGAGAGTTCAGCGGCCTGAGAAGCAGAGCATTTGATAGAACTCCGCA
JMSF046C10+           TCTTTGTCTCAGTGGAGAGTTCAGCGGCCTGAGAAGCAGAGCATTTGATAGAACTCCGCA
JMSF023B10+           TCTTTGTCTCAGTGGAGAGTTCAGCGGCCTGAGAAGCAGAGCATTTGATAGAACTCCGCA
                      ____________________________________________________________
consensus             TCTTTGTCTCAGTGGAGAGTTCAGCGGCCTGAGAAGCAGAGCATTTGATAGAACTCCGCA
 
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JMFS074E10+           GTGGGTTTACTGAGCAGAGCTGGAAAGGAGCTTTGGCTGTCAAACAAGAAGCCAACTTGC
JMFS138H03+           GTGGGTTTACTGAGCAGAGCTGGAAAGGAGCTTTGGCTGTCAAACAAGAAGCCAACTTGC
JMFS077G10+           GTGGGTTTACTGAGCAGAGCTGGAAAGGAGCTTTGGCTGTCAAACAAGAAGCCAACTTGC
JMSF046C10+           GTGGGTTTACTGAGCAGAGCTGGAAAGGAGCTTTGGCTGTCAAACAAGAAGCCAACTTGC
JMSF023B10+           GTGGGTTTACTGAGCAGAGCTGGAAAGGAGCTTTGGCTGTCAAACAAGAAGCCAACTTGC
JMSF005B09+                   ACTGAGCAGAGCTGGAAAGGAGCTTTGGCTGTCAAACAAGAAGCCAACTTGC
                      ____________________________________________________________
consensus             GTGGGTTTACTGAGCAGAGCTGGAAAGGAGCTTTGGCTGTCAAACAAGAAGCCAACTTGC
 
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JMFS074E10+           TCCCAAAGAAACGATTTTTCAAGAAAGGTGAAGAAAGACTGGCGCTTTTTGTGCTGCCAA
JMFS138H03+           TCCCAAAGAAACGATTTTTCAAGAAAGGTGAAGAAAGACTGGCGCTTTTTGTGCTGCCAA
JMFS077G10+           TCCCAAAGAAACGATTTTTCAAGAAAGGTGAAGAAAGACTGGCGCTTTTTGTGCTGCCAA
JMSF046C10+           TCCCAAAGAAACGATTTTTCAAGAAAGGTGAAGAAAGACTGGCGCTTTTTGTGCTGCCAA
JMSF023B10+           TCCCAAAGAAACGATTTTTCAAGAAAGGTGAAGAAAGACTGGCGCTTTTTGTGCTGCCAA
JMSF005B09+           TCCCAAAGAAACGATTTTTCAAGAAAGGTGAAGAAAGACTGGCGCTTTTTGTGCTGCCAA
                      ____________________________________________________________
consensus             TCCCAAAGAAACGATTTTTCAAGAAAGGTGAAGAAAGACTGGCGCTTTTTGTGCTGCCAA
 
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JMFS074E10+           GAATAGGGTTTCTCAGAGGGAGAGTAGCGGGAGTGATAAAAGAGTGTGAACCAATCGCCA
JMFS138H03+           GAATAGGGTTTCTCAGAGGGAGAGTAGCGGGAGTGATAAAAGAGTGTGAACCAATCGCCA
JMFS077G10+           GAATAGGGTTTCTCAGAGGGAGAGTAGCGGGAGTGATAAAAGAGTGTGAACCAATCGCCA
JMSF046C10+           GAATAGGGTTTCTCAGAGGGAGAGTAGCGGGAGTGATAAAAGAGTGTGAACCAATCGCCA
JMSF023B10+           GAATAGGGTTTCTCAGAGGGAGAGTAGCGGGAGTGATAAAAGAGTGTGAACCAATCGCCA
JMSF005B09+           GAATAGGGTTTCTCAGAGGGAGAGTAGCGGGAGTGATAAAAGAGTGTGAACCAATCGCCA
                      ____________________________________________________________
consensus             GAATAGGGTTTCTCAGAGGGAGAGTAGCGGGAGTGATAAAAGAGTGTGAACCAATCGCCA
 
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JMFS074E10+           TCTCCATTTCTCACTCTCTGCCTTGCGTTAAGCTCAGAGTTTG                 
JMFS138H03+           TCTCCATTTCTCACTCTCTGCCTTGCGTTAAGCTCAGAGTTTG                 
JMFS077G10+           TCTCCATTTCTCACTCTCTGCCTTGCGTTAAGCTCAGAGTTTG                 
JMSF046C10+           TCTCCATTTCTCACTCTNTGCCTTGCGTTAAGCTCAGAGTTTGTTGTGCAGAGAGGAC  
JMSF023B10+           TCTCCATTTCTCACTCTCTGCCTTGCGTTAAGCTCAGAGTTTGTTGTGCAGAGAGGAC  
JMSF005B09+           TCTCCATTTCTCACTCTCTGCCTTGCGTTAAGCTCAGAGTTTGTTGTGCAGAGAGGACCC
                      ____________________________________________________________
consensus             TCTCCATTTCTCACTCTCTGCCTTGCGTTAAGCTCAGAGTTTGTTGTGCAGAGAGGACCC