Contig 002077:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006E03Sequence628002077 (15)ref|XP_009602682.1|2e-71PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0
JMFF022D17Sequence451002077 (15)ref|XP_009602682.1|2e-25PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0676002077 (15)ref|XP_009602682.1|3e-90PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0
JMFF035G10Sequence632002077 (15)ref|XP_009602682.1|3e-77PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0
JMFF051C07Sequence541002077 (15)ref|XP_009602682.1|9e-70PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0353002077 (15)
JMFN017D24Sequence547002077 (15)ref|XP_009602682.1|2e-57PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0
JMFN025N18Sequence634002077 (15)ref|XP_009602682.1|5e-103PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0
JMFN045I13Sequence592002077 (15)ref|XP_009602682.1|6e-76PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0
JMSF005A24Sequence286002077 (15)257011764 (13)gb|AFK45072.1|1e-42unknown [Lotus japonicus]
JMSF052C05Sequence677002077 (15)ref|XP_009602682.1|4e-111PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0911002077 (15)ref|XP_009602682.1|1e-125PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0
JMSF053A09Sequence662002077 (15)ref|XP_009602682.1|2e-110PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0111016228
JMSF053C05Sequence673002077 (15)ref|XP_009602682.1|3e-110PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0864002077 (15)ref|XP_009602682.1|2e-125PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF051C07- CCTTATGGCGGATCACCCTGG
                      ____________________________________________________________
consensus CCTTATGGCGGATCACCCTGG
 
. : . : . : . : . : . :
rJMFF051C07- AGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAAGACCAGCATTCTCATTG
                      ____________________________________________________________
consensus AGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAGACCAGCATTCTCATTG
 
. : . : . : . : . : . :
rJMFF051C07- CAACAATGTACAGCCCCAACCATTGGAAGGGACTAGTGACAGCAAAACTTATGTCATAAT
rJMFF035G10- ATGTACAGCCCCAACCATTGGAAGGGACTAGTGACAGCAGAACTTATGTCATAAT
rJMFF022D17- AGCCCCAACCATTGGAAGGGACTAGTGACAGCAGAACTTATGTCATAAT
rJMSF053C05- AGCCCCAACCATTGGAAGGGACTAGTGACAGCAGAACTTATGTCATAAT
rJMSF052C05- AGCCCCAACCATTGGAAGGGACTAGTGACAGCAGAACTTATGTCATAAT
                      ____________________________________________________________
consensus CAACAATGTACAGCCCCAACCATTGGAAGGGACTAGTGACAGCAGAACTTATGTCATAAT
 
. : . : . : . : . : . :
rJMFF051C07- CAAGGACAAAACCCATCTCACACCACAAGGTATATTAAACACTCCGAGAGTCTCAATTGT
rJMFF035G10- CAAGGACAAAACCCATCTCACACCACAAGGTATATTAAACACTCCGAGAGTCTCAATTGT
rJMFF022D17- CAAGGACAAAACCCATCTCACACCACAAGGTATATTAAACACTCCGAGAGTCTCAATTGT
rJMSF053C05- CAAGGACAAAACCCATCTCACACCACAAGGTATATTAAACACTCCGAGAGTCTCAATTGT
rJMSF052C05- CAAGGACAAAACCCATCTCACACCACAAGGTATATTAAACACTCCGAGAGTCTCAATTGT
                      ____________________________________________________________
consensus CAAGGACAAAACCCATCTCACACCACAAGGTATATTAAACACTCCGAGAGTCTCAATTGT
 
. : . : . : . : . : . :
rJMFF051C07- GAAAGTAGTCGGTTATGCTACTGGCCAGAGGTAAAAAGAGAGCGAGGAAACCCCCCGAAA
rJMFF035G10- GAAAGTAGTCGGTTATGCTACTGGCCAGAGGTAAAAAGAGAGCGAGGAAACACACCGAAA
rJMFF022D17- GAAAGTANTCGGTTATGCTACTGGCCAGAGGTAAAAAGAGAGCGAGGAAACACACCGAAA
rJMSF053C05- GAAAGTAGTCGGTTATGCTACTGGCCAGAGGTAAAAAGAGAGCGAGGAAACACACCGAAA
rJMSF052C05- GAAAGTAGTCGGTTATGCTACTGGCCAGAGGTAAAAAGAGAGCGAGGAAACACACCGAAA
                      ____________________________________________________________
consensus GAAAGTAGTCGGTTATGCTACTGGCCAGAGGTAAAAAGAGAGCGAGGAAACACACCGAAA
 
. : . : . : . : . : . :
rJMFF051C07- GAAAGAAAGAAAGAAAGAAGGCAAATGGCCAGTAAAGAAATAACGAAGAAGGGGAAGAGA
rJMFF035G10- GAAAGAAAGAAAGAAAGAAGGCAAATGGCCAGTAGAGAAATAACGAAGAAGGGGAAGAGA
rJMFF022D17- GAAAGAAAGAAAGAAAGAAGGCAAATGGCCAGTAGAGAAATAACGAAGAAGGGGAAGAGA
rJMSF053C05- GAAAGAAAGAAAGAAAGAAGGCAAATGGCCAGTAGAGAAATAACGAAGAAGGGGAAGAGA
rJMSF052C05- GAAAGAAAGAAAGAAAGAAGGCAAATGGCCAGTAGAGAAATAACGAAGAAGGGGAAGAGA
                      ____________________________________________________________
consensus GAAAGAAAGAAAGAAAGAAGGCAAATGGCCAGTAGAGAAATAACGAAGAAGGGGAAGAGA
 
. : . : . : . : . : . :
rJMFF051C07- TTTTCAAGCTTCAGGAACTGGAGTTGTCGGGC
rJMFF035G10- TTTTCAAGCTTCAGGAACTGGAGTTGTCGGGCGCTTCACCGAGGCTGACTTGATTAGGTG
rJMFF022D17- TTTTCAAGCTTCAGGAACTGGAGTTGTCGGGCGCTTCACCGAGGCTGACTTGATTAGGTG
rJMSF053C05- TTTTCAAGCTTCAGGAACTGGAGTTGTCGGGCGCTTCACCGAGGCTGACTTGATTAGGTG
rJMSF052C05- TTTTCAAGCTTCAGGAACTGGAGTTGTCGGGCGCTTCACCGAGGCTGACTTGATTAGGTG
                      ____________________________________________________________
consensus TTTTCAAGCTTCAGGAACTGGAGTTGTCGGGCGCTTCACCGAGGCTGACTTGATTAGGTG
 
. : . : . : . : . : . :
rJMFF035G10- GTTGTAGCTACCTTTCTCCTTGAATAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
rJMFF022D17- GTTGTAGCTACCTTTCTCCTTGAATAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
rJMSF053C05- GTTGTAGCTACCTTTCTCCTTGAATAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
rJMSF052C05- GTTGTAGCTACCTTTCTCCTTGAATAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
JMSF053C05+ TAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
JMFN025N18+ TATAAGATTCC
JMSF052C05+ TGAATAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
JMSF053A09+ TAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
                      ____________________________________________________________
consensus GTTGTAGCTACCTTTCTCCTTGAATAGCTGGGAGAAATGAGGTTTGCAATATAAGATTCC
 
. : . : . : . : . : . :
rJMFF035G10- ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
rJMFF022D17- ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
rJMSF053C05- ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
rJMSF052C05- ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
JMSF053C05+ ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
JMFN025N18+ ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
JMSF052C05+ ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
JMSF053A09+ ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
JMCP006E03+ CGAGGGAGTTAAAGAcgtaggAggATGtcttgtaTTAAAACA
                      ____________________________________________________________
consensus ATCCAGTGCTGCATAGTTCGAGGGAGTTAAAGAGCATCCACCATGAGAACATTTAAAACA
 
. : . : . : . : . : . :
rJMFF035G10- CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
rJMFF022D17- CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
rJMSF053C05- CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
rJMSF052C05- CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
JMSF053C05+ CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
JMFN025N18+ CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
JMSF052C05+ CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
JMSF053A09+ CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
JMCP006E03+ CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
JMFN045I13+ CCAGAGGGTAAGCTGTCTTCCC
                      ____________________________________________________________
consensus CGACTTGTGGTAGGATTGGTTCTCCACTGTCACCTTCTCCAGAGGGTAAGCTGTCTTCCC
 
. : . : . : . : . : . :
rJMFF035G10- ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
rJMFF022D17- ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
rJMSF053C05- ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMFN017D24+ GGGACCT
rJMSF052C05- ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMSF053C05+ ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMFN025N18+ ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMSF052C05+ ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMSF053A09+ ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMCP006E03+ ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMFF051C07+ CAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
JMFN045I13+ ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
                      ____________________________________________________________
consensus ACAAGTAGCACATTTTTCCTGTGTCCCGGAGAACATGCTGGCAGCTTTGCTAGGGGACCT
 
. : . : . : . : . : . :
rJMFF035G10- TGTCAGCTCTGGGGTTAACTTGTCANCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
rJMFF022D17- TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
rJMSF053C05- TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMFN017D24+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
rJMSF052C05- TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMSF053C05+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMFN025N18+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMSF052C05+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMSF053A09+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMCP006E03+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMFF051C07+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
JMFN045I13+ TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
                      ____________________________________________________________
consensus TGTCAGCTCTGGGGTTAACTTGTCAGCCGACTTTGCAGGTGACTGAAAATTCTTATTGAA
 
. : . : . : . : . : . :
rJMFF035G10- ATTCCCTGATTCCTTGAAGAGCTGCTCGAA
rJMFF022D17- ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
rJMSF053C05- ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMFN017D24+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
rJMSF052C05- ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMSF053C05+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMFN025N18+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMSF052C05+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMSF053A09+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMCP006E03+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMFF051C07+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
JMFN045I13+ ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
                      ____________________________________________________________
consensus ATTCCCTGATTCCTTGAAGAGCTGCTCGAAATGGGGCTTACAGTACAGAACACCTTCCAT
 
. : . : . : . : . : . :
rJMFF022D17- TGAGGAGTAATTACTCAGCT
rJMSF053C05- TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMFN017D24+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMFF022D17+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
rJMSF052C05- TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMSF053C05+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMFN025N18+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMSF052C05+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMSF053A09+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMCP006E03+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAtctgtc
JMFF051C07+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
JMFN045I13+ TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
                      ____________________________________________________________
consensus TGAGGAGTAATTACTCAGCTTAAGGGTGCCTTTGCAATGGCTGCATCTGAAGCAAGA---
 
. : . : . : . : . : . :
rJMSF053C05- -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMFN017D24+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMFF022D17+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
rJMSF052C05- -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMSF053C05+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMFN025N18+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMSF052C05+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMSF053A09+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMCP006E03+ tgaaGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMFF051C07+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
JMFN045I13+ -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
                      ____________________________________________________________
consensus -CTTGTGATAATTAATCCCATCAGCTGACAACAGCTCCACAGGATAAACTGTCTTCTCAC
 
. : . : . : . : . : . :
rJMSF053C05- AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMFN017D24+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMFF022D17+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
rJMSF052C05- AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMSF053C05+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMFN025N18+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMSF052C05+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMSF053A09+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMCP006E03+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMFF051C07+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMFN045I13+ AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
JMSF005A24+ TGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
                      ____________________________________________________________
consensus AAGCCTTGCATTTCTGCTGAGTCCCAATGAAAGACATTCTCTTTTTTGTGCTCCTAAAAT
 
. : . : . : . : . : . :
rJMSF053C05- CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCNAACCTT
JMFN017D24+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCT
JMFF022D17+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCT
rJMSF052C05- CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
JMSF053C05+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
JMFN025N18+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
JMSF052C05+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
JMSF053A09+ CCCTCAAAAGCAAAGTCCAGAT--------------CTTGAAGAAAAAAGGGAGTTCTTG
JMCP006E03+ CCCTCAAAAGCAAAGTCCActagactgggaagtttggaacttctAAAAAGGGAGTTCTTG
JMFF051C07+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
JMFN045I13+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
JMSF005A24+ CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
                      ____________________________________________________________
consensus CCCTCAAAAGCAAAGTCCAGATCTGACCCTTCAAACCTTGAAGAAAAAAGGGAGTTCTTG
 
. : . : . : . : . : . :
rJMSF052C05- ATCTACCAGCTTGTGCTTCTGCAGAT
JMSF053C05+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
JMFN025N18+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAG--AAACAAGGCGAAACGT
JMSF052C05+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
JMSF053A09+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
JMCP006E03+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
JMFF051C07+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
JMFN045I13+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
JMSF005A24+ ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
                      ____________________________________________________________
consensus ATCTACCAGCTTGTGCTTCTGCAGATCAGAGTGGAGTTCCAGAAAAACAAGGCGAAACGT
 
. : . : . : . : . : . :
JMSF053C05+ CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATC
JMFN025N18+ CGGATCCAAACTATTTGGGAAACCTTGAA
JMSF052C05+ CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATC
JMSF053A09+ CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATCACTCC
JMCP006E03+ CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATCACTCCGCG
JMFF051C07+ CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATCACTCCGCGACTCTGCGTACGAC
JMFN045I13+ CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATCACTCCGCGACTCTGCGTACGAC
JMSF005A24+ CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATCACTCCGCGACTCTGCGTACGAC
                      ____________________________________________________________
consensus CGGATCCAAACTATTTGGGAAACCTTGAACTAAGAATCACTCCGCGACTCTGCGTACGAC
 
. : . : . : . : . : . :
JMFF051C07+ ATTCC
JMFN045I13+ GTTCCGTTATATATCTTCGAGGAGAGAGAGAATT
JMSF005A24+ GTTCCGTTATATATCTTCGAGGAGAGAGAGAATTTGGAGATGGCGAAGTGGATGATGGTC
                      ____________________________________________________________
consensus GTTCCGTTATATATCTTCGAGGAGAGAGAGAATTTGGAGATGGCGAAGTGGATGATGGTC