Contig 002074:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001G03Sequence479023670445002074 (13)emb|CDP04529.1|1e-52unnamed protein product [Coffea canephora]
JMFF014I18Sequence497002074 (13)ref|XP_011095912.1|8e-62PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Sesamum indic
JMFF030D11Sequence566002074 (13)ref|XP_011095912.1|6e-73PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Sesamum indic704002074 (13)ref|XP_009590287.1|6e-116PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Nicotiana tom
JMFF047K21Sequence453002074 (13)ref|XP_011095912.1|3e-22PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Sesamum indic403002074 (13)ref|XP_009590287.1|2e-46PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Nicotiana tom
JMFN004C10Sequence180002074 (13)
JMFN005A13Sequence497002074 (13)ref|XP_009620191.1|2e-23PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Nicotian
JMFN009J07Sequence632002074 (13)ref|XP_011095912.1|2e-90PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Sesamum indic
JMFN025K07Sequence584002074 (13)ref|XP_009620191.1|6e-83PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Nicotian
JMSF004I12Sequence436002074 (13)ref|XP_011095912.1|9e-26PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Sesamum indic
JMSF029M18Sequence677002074 (13)ref|XP_011095912.1|3e-92PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Sesamum indic676002074 (13)ref|XP_009590287.1|4e-112PREDICTED: SNF1-related protein kinase regulatory subunit beta-2 [Nicotiana tom

Alignment

This contig is upended


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JMFN005A13+                                      GTTTTCTTTATAATATGCTTGAAAGCAACATTT
                      ____________________________________________________________
consensus                                        GTTTTCTTTATAATATGCTTGAAAGCAACATTT
 
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JMFN005A13+           TTGACTTGGAAATGAAAAAAAAAAAAGTCAAAAAAAAAAAAAAAAGTGCCACCATTCAAG
                      ____________________________________________________________
consensus             TTGACTTGGAAATGAAAAAAAAAAAAGTCAAAAAAAAAAAAAAAAGTGCCACCATTCAAG
 
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JMFN005A13+           ATACCACATCTAAAGAGAAATAGAGCGTGGGATAGGGGCAACATGAATGCACAAAGGGTA
                      ____________________________________________________________
consensus             ATACCACATCTAAAGAGAAATAGAGCGTGGGATAGGGGCAACATGAATGCACAAAGGGTA
 
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JMFN005A13+           AATGCACCTCGCTATCAGGCATTTGAATGCTGAATGGAATTTCAACAAATTTTGCTTTTT
                      ____________________________________________________________
consensus             AATGCACCTCGCTATCAGGCATTTGAATGCTGAATGGAATTTCAACAAATTTTGCTTTTT
 
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JMFN005A13+           TTTTTTATCTTTTTTTTTTTTTTTCCCAGTGTTGTTGCCAGCCAGTAGTAGTAGTAGTGT
rJMFF047K21-                   TTTTTTTTTTTTTTTCCCAGTGTTGTTGCCAGCCAGTAGTAGTAGTAGTGT
rJMFF001G03-                                                   CCAGTAGTAGTAGTAGTGT
JMFN025K07+                                   CCCAGTGTTGTTGCCAGCCAGTAGTAGTAGTAGTGT
                      ____________________________________________________________
consensus             TTTTTTATCTTTTTTTTTTTTTTTCCCAGTGTTGTTGCCAGCCAGTAGTAGTAGTAGTGT
 
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JMFN005A13+           GACAATTGCAGATGATGATGGATCGATCGAAGCTGAGGCTCGGGATTCTCATCTCTCTAT
rJMFF047K21-          GACAATTGCAGATGATGATGGATCGATCGAAGCTGAGGCTCGGGATTCTCATCTCTCTAT
rJMFF001G03-          GACAATTGCAGATGATGATGGATCGATCGAAGCTGAGGCTCGGGATTCTCATCTCTCTAT
JMFN025K07+           GACAATTGCAGATGATGATGGATCGATCGAAGCTGAGGCTCGGGATTCTCATCTCTCTAT
rJMSF029M18-                         TGATGGNTCGATCGAAGCTGAGGCTCGGGATTCTCATCTCTCTAT
rJMFF030D11-             AATTGCAGATGATGATGGATCGATCGAAGCTGAGGCTCGGGATTCTCATCTCTCTAT
                      ____________________________________________________________
consensus             GACAATTGCAGATGATGATGGATCGATCGAAGCTGAGGCTCGGGATTCTCATCTCTCTAT
 
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JMFN005A13+           GGACTTGTACAGCACCACGGTGACGTATTTGGAGAGGAACCTATGAGTAGAACCGAGTGC
rJMFF047K21-          GGACTTGTACAGCACCACGGTGACGTATTTGGAGAGGAACCTATGAGTAGAACCGAGTGC
rJMFF001G03-          GGACTTGTACAGCACCACGGTGACGTATTTGGAGAGGAACCTATGAGTAGAACCGAGTGC
JMFN025K07+           GGACTTGTACAGCACCACGGTGACGTATTTGGAGAGGAACCTATGAGTAGAACCGAGTGC
rJMSF029M18-          GGACTTGTACAGCACCACGGTGACGTATTTGGAGAGGAACCTATGAGTAGAACCGAGTGC
rJMFF030D11-          GGACTTGTACAGCACCACGGTGACGTATTTGGAGAGGAACCTATGAGTAGAACCGAGTGC
                      ____________________________________________________________
consensus             GGACTTGTACAGCACCACGGTGACGTATTTGGAGAGGAACCTATGAGTAGAACCGAGTGC
 
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JMFN005A13+           AACCACTGACGGGGTGCTTCTACCCCTCTGCATGTAGAGATGATTAAGCACAACGTGCTG
rJMFF047K21-          AACCACTGACGGGGTGCTTCTACCCCTCTGCATGTAGAGATGATTAAGCACAACGTGCTG
rJMFF001G03-          AACCACTGACGGGGTGCTTCTACCCCTCTGCATGTAGAGATGATTAAGCACAACGTGCTG
JMFN025K07+           AACCACTGACGGGGTGCTTCTACCCCTCTGCATGTAGAGATGATTAAGCACAACGTGCTG
rJMSF029M18-          AACCACTGACGGGGTGCTTCTACCCCTCTGCATGTAGAGATGATTAAGCACAACGTGCTG
rJMFF030D11-          AACCACTGACGGGGTGCTTCTACCCCTCTGCATGTAGAGATGATTAAGCACAACGTGCTG
                      ____________________________________________________________
consensus             AACCACTGACGGGGTGCTTCTACCCCTCTGCATGTAGAGATGATTAAGCACAACGTGCTG
 
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JMFN005A13+           AGGCCTCGAGAACGGAGGCGGGATTTCTGAATGAGATGATGGAA                
rJMFF047K21-          AGGCCTCGAGAACGGAGGCGGGATTTCTGAATGAGATGATGGAACATTAAGCAAGGTTAA
rJMFF001G03-          AGGCCTCGAGAACGGAGGCGGGATTTCTGAATGAGATGATGGAACATTAAGCAAGGTTAA
JMFN025K07+           AGGCCTCGAGAACGGAGGCGGGATTTCTGAATGAGATGATGGAACATTAAGCAAGGTTAA
rJMSF029M18-          AGGCCTCGAGAACGGAGGCGGGATTTCTGAATGAGATGATGGAACATTAAGCAAGGTTAA
rJMFF030D11-          AGGCCTCGAGAACGGAGGCGGGATTTCTGAATGAGATGATGGAACATTAAGCAAGGTTAA
JMSF029M18+                                      TGAATGAGATGATGGAACATTAAGCAAGGTTAA
                      ____________________________________________________________
consensus             AGGCCTCGAGAACGGAGGCGGGATTTCTGAATGAGATGATGGAACATTAAGCAAGGTTAA
 
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rJMFF047K21-          CTGAAGATGGGGAGGTACTAAAGGCGGCTCCTTGGCATAGTCCTCGGCTCCAAGTTGGAG
rJMFF001G03-          CTGAAAATGGGGAGGTACTAAAGGCGGCTCCTTGGCATAGTCCTCGGCTCCAAGTTGGAG
JMFN025K07+           CTGAAGATGGGGAGGTACTAAAGGCGGCTCCTTGGCATAGTCCTCGGCTCCAAGTTGGAG
rJMSF029M18-          CTGAAGATGGGGAGGTACTAAAGGCGGCTCCTTGGCATAGTCCTCGGCTCCAAGTTGGAG
rJMFF030D11-          CTGAAGATGGGGAGGTACTAAAGGCGGCTCCTTGGCATAGTCCTCGGCTCCAAGTTGGAG
JMSF029M18+           CTGAAGATGGGGAGGTACTAAAGGCGGCTCCTTGGCATAGTCCTCGGCTCCAAGTTGGAG
JMFN009J07+                                                           TCCAAGTTGGAG
                      ____________________________________________________________
consensus             CTGAAGATGGGGAGGTACTAAAGGCGGCTCCTTGGCATAGTCCTCGGCTCCAAGTTGGAG
 
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rJMFF047K21-          GCTGCTGTAACTTGAATCCGGGGATA                                  
rJMFF001G03-          GCTGCTGTAACTTGAATCCGGGGATAGAGGAGGCTCANAGCCAGAGATGCTCTGAATGTC
JMFN025K07+           GCTGCTGTAACTTGAATCCGGGGATAGAGGAGGCTCAAAGCCAGAGATGCTCTGAATGTC
rJMSF029M18-          GCTGCTGTAACTTGAATCCGGGGATAGAGGAGGCTCAAAGCCAGAGATGCTCTGAATGTC
rJMFF030D11-          GCTGCTGTAACTTGAATCCGGGGATAGAGGAGGCTCAAAGCCAGAGATGCTCTGAATGTC
JMSF029M18+           GCTGCTGTAACTTGAATCCGGGGATAGAGGAGGCTCAAAGCCAGAGATGCTCTGAATGTC
JMFN009J07+           GCTGCTGTAACTTGAATCCGGGATAAGAGGAGGCTCAAAGCCAGAGATGCTCTGAATGTC
                      ____________________________________________________________
consensus             GCTGCTGTAACTTGAATCCGGGGATAGAGGAGGCTCAAAGCCAGAGATGCTCTGAATGTC
 
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rJMFF001G03-          TTCCGGAACATACTCCTGCAAATCCNAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
JMFN025K07+           TTCCGGAACATACTCCTGCAAATCCAAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
rJMSF029M18-          TTCCGGAACATACTCCTGCAAATCCAAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
rJMFF030D11-          TTCCGGAACATACTCCTGCAAATCCAAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
JMSF029M18+           TTCCGGAACATACTCCTGCAAATCCAAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
JMFN009J07+           TTCCGGAACATACTCCTGCAAATCCAAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
JMFF030D11+                             CAAATCCAAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
                      ____________________________________________________________
consensus             TTCCGGAACATACTCCTGCAAATCCAAGACATTGTAATAATTTCCAGCTTCATCAGTGAT
 
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rJMFF001G03-          CCAC                                                        
JMFN025K07+           CCACGCGACATCAGGGGAATACCTCCATTGTCCATCAACTATAAACCTATACTGATAAAC
rJMSF029M18-          CCACGCGACATCAGGGGAATACCTCCATTGTCCATCAACTATAAACCTATACTGATAAAC
rJMFF030D11-          CCACGCGACATCAGGGGAATACCTCCATTGTCCATCAACTATAAACCTATACTGATAAAC
JMSF029M18+           CCACGCGACATCAGGGGAATACCTCCATTGTCCATCAACTATAAACCTATACTGATAAAC
JMFN009J07+           CCACGCGACATCAGGGGAATACCTCCATTGTCCATCAACTATAAACCTATACTGATAAAC
JMFF014I18+                                      TTGTCCATCAACTATAAACCTATACTGATAAAC
JMFF030D11+           CCACGCGACATCAGGGGAATACCTCCATTGTCCATCAACTATAAACCTATACTGATAAAC
                      ____________________________________________________________
consensus             CCACGCGACATCAGGGGAATACCTCCATTGTCCATCAACTATAAACCTATACTGATAAAC
 
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JMFN025K07+           TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
rJMSF029M18-          TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
rJMFF030D11-          TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
JMSF029M18+           TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
JMFN009J07+           TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
JMFF014I18+           TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
JMFF047K21+                         CTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCC-
JMFF030D11+           TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
                      ____________________________________________________________
consensus             TCCTGAAGGGAGCACTTTCATAATGGTGAAATCTTTTCCTGACCTCTGCAAAGGCTTCCT
 
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JMFN025K07+           TGTTTTCC                                                    
rJMSF029M18-          TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
rJMFF030D11-          TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
JMSF029M18+           TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
JMFN009J07+           TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
JMFF014I18+           TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
JMFF047K21+           TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
JMFF030D11+           TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
JMSF004I12+                                                       CACCATGGCCCCAGAT
                      ____________________________________________________________
consensus             TGTTTTCCAATCATCCCATGACCCCTCCACAGAAACTTCCTTGCCACCATGGCCCCAGAT
 
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rJMSF029M18-          TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
rJMFF030D11-          TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
JMSF029M18+           TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
JMFN009J07+           TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
JMFF014I18+           TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
JMFF047K21+           TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
JMFF030D11+           TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
JMSF004I12+           NATCACTGTCGGAACCCTTTGCTCATCATACANGTCATCATATCCAGATGCAGTTTGCAT
                      ____________________________________________________________
consensus             TATCACTGTCGGAACCCTTTGCTCATCATACATGTCATCATATCCAGATGCAGTTTGCAT
 
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rJMSF029M18-          CCATGGAGGGTTTGGGATGTGCAACTCATCA                             
rJMFF030D11-          CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAA             
JMSF029M18+           CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAACCACTGGCATCTG
JMFN009J07+           CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAACCACTGGCATCTG
JMFF014I18+           CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAACCACTGGCATCTG
JMFF047K21+           CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAACCACTGGCATC  
JMFF030D11+           CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAACCACTGGCATCTG
JMSF004I12+           CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAACCACTGGCATCTG
                      ____________________________________________________________
consensus             CCATGGAGGGTTTGGGATGTGCAACTCATCAGGTCTTTGTAGAGGAACCACTGGCATCTG
 
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JMSF029M18+           AGGTCGGAACATCAAAGGGGAACGAGAAGCCCTAGGGCTGGAAGGTGGAGACTGACCCAT
JMFN009J07+           AGGTCGGAACATCAAAGGGGAACGAGAAGCCCTAGGGCTGGAAGGTGGAGACTGACCCAT
JMFF014I18+           AGGTCGGAACATCAAAGGGGAACGAGAAGCCCTAGGGCTGGAAGGTGGAGACTGACCCAT
JMFN004C10+                                                                   CCAT
JMFF030D11+           AGGTCGGAACATCAAAGGGGAACGAGAAGCCCTAGGGCTGGAAGGTGGAGACTGACCCAT
JMSF004I12+           AGGTCGGAACATCAAAGGGGAACGAGAAGCCCTAGGGCTGGAAGGTGGAGACTGACCCAT
                      ____________________________________________________________
consensus             AGGTCGGAACATCAAAGGGGAACGAGAAGCCCTAGGGCTGGAAGGTGGAGACTGACCCAT
 
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JMSF029M18+           GAACTCACCATCCATCTGCGCACTATCCGGCGCCTCACCGCCACCGCCGGCGGCGCCACT
JMFN009J07+           GAACTCACCATCCATCTGCGCACTATCCGGCGCCTCACCGCCACCGCCGGCGGCGCCACT
JMFF014I18+           GAACTCACCATCCATCTGCGCACTATCCGGCGCCTCACCGCCACCGCCGGCGGCGCCACT
JMFN004C10+           GAACTCACCATCCATCTGCGCACTATCCGGCGCCTCACCGCCACCGCCGGCGGCGCCACT
JMFF030D11+           GAACTCACCATCCATCTGCGCACTATCCGGCGCCTCACCGCCACCGCCGGCGGCGCCACT
JMSF004I12+           GAACTCACCATCCATCTGCGCACTATCCGGCGCCTCACCGCCACCGCCGGCGGCGCCACT
                      ____________________________________________________________
consensus             GAACTCACCATCCATCTGCGCACTATCCGGCGCCTCACCGCCACCGCCGGCGGCGCCACT
 
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JMSF029M18+           CTCTTCAGCTCTGGACGGGCTGTTGCCACCACCGCCATCT                    
JMFN009J07+           CTCTTCAGCTCTGGACGGGCTGTTGCCACCACCGCCATCTTCTTCTCTCCCATTAACATT
JMFF014I18+           CTCTTCAGCTCTGGACGGGCTGTTGCCACCACCGCCATCTTCTTCTCTCCCATTAACATT
JMFN004C10+           CTCTTCAGCTCTGGACGGGCTGTTGCCACCACCGCCATCTTCTTCTCTCCCATTAACATT
JMFF030D11+           CTCTTCAGCTCTGGACGGGCTGTTGCCACCACCGCCATCTTCTTCTCTCCCATTAACATT
JMSF004I12+           CTCTTCAGCTCTGGACGGGCTGTTGCCACCACCGCCATCTTCTTCTCTCCCATTAACATT
                      ____________________________________________________________
consensus             CTCTTCAGCTCTGGACGGGCTGTTGCCACCACCGCCATCTTCTTCTCTCCCATTAACATT
 
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JMFN009J07+           CCCCATTTTTATTCAGCACG                                        
JMFF014I18+           CCCCATTTTTATTCAGCACGAAAAAGCGACTCGCCTTAGAATCT                
JMFN004C10+           CCCCATTTT                                                   
JMFF030D11+           CCCCATTTTTATTCAGCACGAAAAAGCGACTCGCCTTAGAATCT                
JMSF004I12+           CCCCATTTTTATTCAGCACGAAAAAGCGACTCGCCTTAGAATCTAAACAATCAGATTCCT
                      ____________________________________________________________
consensus             CCCCATTTTTATTCAGCACGAAAAAGCGACTCGCCTTAGAATCTAAACAATCAGATTCCT
 
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JMSF004I12+           TGTTGTTGTATATATATAAATATATACTATACAGCATACAGTATTACATATACTTCTCCC
                      ____________________________________________________________
consensus             TGTTGTTGTATATATATAAATATATACTATACAGCATACAGTATTACATATACTTCTCCC