| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002H22 | Sequence | 447 | 002072 (10) | emb|CDP09038.1| | 1e-23 | unnamed protein product [Coffea canephora] | 731 | 013825 (10) | emb|CDP09038.1| | 1e-45 | unnamed protein product [Coffea canephora] |
| JMFF003E15 | Sequence | 578 | 002072 (10) | emb|CDP09038.1| | 1e-38 | unnamed protein product [Coffea canephora] | 727 | 013825 (10) | emb|CDP09038.1| | 1e-45 | unnamed protein product [Coffea canephora] |
| JMFF005M18 | Sequence | 410 | 002072 (10) | 726 | 013825 (10) | emb|CDP09038.1| | 7e-45 | unnamed protein product [Coffea canephora] | |||
| JMFF045O19 | Sequence | 614 | 002072 (10) | emb|CDP09038.1| | 6e-35 | unnamed protein product [Coffea canephora] | 624 | 013825 (10) | emb|CDP09038.1| | 8e-22 | unnamed protein product [Coffea canephora] |
| JMSF002N15 | Sequence | 114 | 002072 (10) | 718 | 013825 (10) | emb|CDP09038.1| | 1e-51 | unnamed protein product [Coffea canephora] | |||
| JMSF004H22 | Sequence | 243 | 002072 (10) | 426 | 013825 (10) | emb|CDP09038.1| | 7e-12 | unnamed protein product [Coffea canephora] | |||
| JMSF007G19 | Sequence | 110 | 002072 (10) | 745 | 013825 (10) | emb|CDP09038.1| | 1e-45 | unnamed protein product [Coffea canephora] | |||
| JMSF043P12 | Sequence | 587 | 002072 (10) | ref|XP_009803866.1| | 132 | PREDICTED: uncharacterized protein LOC104249190 [Nicotiana sylvestris] | 529 | 024666 | |||
| JMSF046A01 | Sequence | 117 | 002072 (10) | 747 | 013825 (10) | emb|CDP09038.1| | 2e-46 | unnamed protein product [Coffea canephora] | |||
| JMSF048C23 | Sequence | 112 | 002072 (10) | 683 | 013825 (10) | emb|CDP09038.1| | 4e-34 | unnamed protein product [Coffea canephora] | |||
This contig is upended
. : . : . : . : . : . :
JMFF003E15+ GAACAGAAACCTAGGGAGGCCCACAAAGGTTATGCAGCCTCATCAGCTNT
____________________________________________________________
consensus GAACAGAAACCTAGGGAGGCCCACAAAGGTTATGCAGCCTCATCAGCTNT
. : . : . : . : . : . :
JMFF003E15+ GATTCCACCCCATCATCTTCCCCAAACCCTTTCAACAGTGAATCCTTCCCTGTTCCCACC
____________________________________________________________
consensus GATTCCACCCCATCATCTTCCCCAAACCCTTTCAACAGTGAATCCTTCCCTGTTCCCACC
. : . : . : . : . : . :
JMFF003E15+ TCCAAATCTTGGCTATATCCATTCAATTCTGAGGTTGTTAGGGCTTGGGTGCTGGTTCTA
____________________________________________________________
consensus TCCAAATCTTGGCTATATCCATTCAATTCTGAGGTTGTTAGGGCTTGGGTGCTGGTTCTA
. : . : . : . : . : . :
JMFF003E15+ GTCACCACAGAATTTGATTTCTTGCAACAAAACAAGTAAGCAATATCACTCCCAATACTG
____________________________________________________________
consensus GTCACCACAGAATTTGATTTCTTGCAACAAAACAAGTAAGCAATATCACTCCCAATACTG
. : . : . : . : . : . :
JMFF003E15+ GTGTATTCCCCCTCAGTTTCTCTGTCTCTGATTCTTCTCCTCACCCATAACAAGTAATAC
JMFF002H22+ TCTCTGTCTCTGATTCTTCTCCTCACCCATAACAAGTAATAC
JMSF043P12+ TCTCTGCCTCTGATTCTTCTCTTCACCCACAACAGATAATAC
JMFF045O19+ TCTCTGTCTCTGATTCTTCTCCTCACCCATAACAAGTAATAC
____________________________________________________________
consensus GTGTATTCCCCCTCAGTTTCTCTGTCTCTGATTCTTCTCCTCACCCATAACAAGTAATAC
. : . : . : . : . : . :
JMFF003E15+ AGCTCTGCAACCAGTCCCATAAGGATACACCCAAACACAAAACTCAAACCAATTCCTAAA
JMFF002H22+ AGCTCTGCAACCAGTCCCATAAGGATACACCCAAACACAAAACTCAAACCAATTCCTAAA
JMSF043P12+ AACTCCCCAACAAGCCCCATCAGAATACAACCGAACACAAAACTCAAACCAATACCCAAA
JMFF045O19+ AGCTCTGCAACCAGTCCCATAAGGATACACCCAAACACAAAACTCAAACCAATTCCTAAA
____________________________________________________________
consensus AGCTCTGCAACCAGTCCCATAAGGATACACCCAAACACAAAACTCAAACCAATTCCTAAA
. : . : . : . : . : . :
JMFF003E15+ CCACTAAAAGATGCCATCTAAAACTGTAAACTTAAACAAGCCACTCTCCTTGTGATTCTC
JMFF002H22+ CCACTAAAAGATGCCATCTAAAACTGTAAACTTAAACAAGCCACTCTCCTTGTGATTCTC
JMSF043P12+ CCACTAAAAGATGCCATCT
JMFF045O19+ CCACTAAAAGATGCCATCTAAAACTGTAAACTTAAACAAGCCACTCTCCTTGTGATTCTC
JMFF005M18+ TC
____________________________________________________________
consensus CCACTAAAAGATGCCATCTAAAACTGTAAACTTAAACAAGCCACTCTCCTTGTGATTCTC
. : . : . : . : . : . :
JMFF003E15+ TCAGTTAAGCATAGCAACAAACACCTCATGTGCATATTGTACTCAACACTAAACTTTGGG
JMFF002H22+ TCAGTTAAGCATAGCAACAAACACCTCATGTGCATATTGTACTCAACACTAAACTTTGGG
JMFF045O19+ TCAGTTAAGCATAGCAACAAACACCTCATGTGCATATTGTACTCAACACTAAACTTTGGG
JMFF005M18+ TCAGTTAAGCATAGCAACAAACACCTCATGTGCATATTGTACTCAACACTAAACTTTGGG
____________________________________________________________
consensus TCAGTTAAGCATAGCAACAAACACCTCATGTGCATATTGTACTCAACACTAAACTTTGGG
. : . : . : . : . : . :
JMFF003E15+ TAAACTCCAAAACGAAATGATATCTCCCAGGAAAGTAGAAAAGGGTGTCAAAAAGTCACG
JMFF002H22+ TAAACTCCAAAACGAAATGATATCTCCCAGGAAAGTAGAAAAGGGTGTCAAAAAGTCACG
JMFF045O19+ TAAACTCCAAAACGAAATGATATCTCCCAGGAAAGTAGAAAAGGGTGTCAAAAAGTCACG
JMFF005M18+ TAAACTCCAAAACGAAATGATATCTCCCAGGAAAGTAGAAAAGGGTGTCAAAAAGTCACG
____________________________________________________________
consensus TAAACTCCAAAACGAAATGATATCTCCCAGGAAAGTAGAAAAGGGTGTCAAAAAGTCACG
. : . : . : . : . : . :
JMFF003E15+ AAACCCATAAACACTCCGCCCTCGAATTCCTAAGAAACACTGAAACAC
JMFF002H22+ AAACCCATAAACACTCCGCCCTCGAATTCCTAAGAAACACTGAAACAC
JMFF045O19+ AAACCCATAAACACTCCGCCCTCGAATTCCTAAGAAACACTGAAACACGAACGCCTTTCA
JMFF005M18+ AAACCCATAAACACTCCGCCCTCGAATTCCTAAGAAACACTGAAACACGAACGCCTTTCA
____________________________________________________________
consensus AAACCCATAAACACTCCGCCCTCGAATTCCTAAGAAACACTGAAACACGAACGCCTTTCA
. : . : . : . : . : . :
JMFF045O19+ TAGCTTCCTCTGATGTTTACATCCTGAAAAGGCCAGCAATGATACTT
JMFF005M18+ TAGCTTCCTCTGATGTTTACATCCTGAAAAGGCCAGCAATGATACTTCGTACAAAAGCTT
____________________________________________________________
consensus TAGCTTCCTCTGATGTTTACATCCTGAAAAGGCCAGCAATGATACTTCGTACAAAAGCTT
. : . : . : . : . : . :
JMFF005M18+ TCCTATGTGTTGCCTTAAAGACACGCAAACAGGAAATCGGAAGGAATTTACTGCGTGGGG
____________________________________________________________
consensus TCCTATGTGTTGCCTTAAAGACACGCAAACAGGAAATCGGAAGGAATTTACTGCGTGGGG
. : . : . : . : . : . :
JMSF046A01+ AAAAAAAAAAGAAGACTTTTTTCTATCCCTCTGCGAGACCCCGGATAGAATTCAAGAAA
JMFF005M18+ AGAAAAAAAAAGAAGACTTTTTTCTATCCCTCTGCGAGACCCCGGATAGAATTCAAGAAA
JMSF007G19+ AAAAAAAAAAGAAGACTTTTTTCTATCCCTCTGCGAGACCCCGGATAGAATTCAAGAAA
JMSF048C23+ AAAAAAAAAAGAAGACTTTTTTCTATCCCTCTGCGAGACCCCGGATAGAATTCAAGAAA
JMSF002N15+ AAAAAAAAAAGAAGACTTTTTTCTATCCCTCTGCGAGACCCCGGATAGAATTCAAGAAA
JMSF004H22+ AAAAAAAAAAGAAGACTTTTTTCAATCCCTCTGCGAGACCCCGGATAGAATTCAAGAAA
____________________________________________________________
consensus AAAAAAAAAAAGAAGACTTTTTTCTATCCCTCTGCGAGACCCCGGATAGAATTCAAGAAA
. : . : . : . : . : . :
JMSF046A01+ CAGCAACAAAGAGAGGAGTGAAGGGAAACTGGTTTGAAATTCAAAGG
JMFF005M18+ CAGCAACAAAGAGAGGAGTGAAGGGAAACTGGTTTGAAATTCAAAGGT
JMSF007G19+ CAGCAACAAAGAGAGGAGTGAAGGGAAACTGGTTTGAAATTCAAAGGT
JMSF048C23+ CAGCAACAAAGAGAGGAGTGAAGGGAAAC
JMSF002N15+ CAGCAACAAAGAGAGGAGTGAAGGGAAACTGGTTTGAAATTCAAAGGT
JMSF004H22+ CAGCAACAAAGAGAGGAGTGAAGGGAAACTGGTTTGAAATTCAAAGGTGTGAAATTATTG
____________________________________________________________
consensus CAGCAACAAAGAGAGGAGTGAAGGGAAACTGGTTTGAAATTCAAAGGTGTGAAATTATTG
. : . : . : . : . : . :
JMSF004H22+ GTTGGAGTGAAGTTATAAAGTGAAAAAAATGTTGTTGATGCGTGCAGAATGGTTGGAGCC
____________________________________________________________
consensus GTTGGAGTGAAGTTATAAAGTGAAAAAAATGTTGTTGATGCGTGCAGAATGGTTGGAGCC
. : . : . : . : . : . :
JMSF004H22+ TTGGAGGGGTCACATCCGTCTGGAGATAGCTCACATGGGTTGGCAAAAGCTTTGCATGCC
____________________________________________________________
consensus TTGGAGGGGTCACATCCGTCTGGAGATAGCTCACATGGGTTGGCAAAAGCTTTGCATGCC