Contig 002071:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF051G11+                                                          ACAAATGTCCTTC
                      ____________________________________________________________
consensus                                                            ACAAATGTCCTTC
 
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JMSF019G10+                                                             TCCTGCAGAT
JMSF051G11+           CAACTCACCGTGTGGATTTTTAGTATCCTCTGCATGGCCCCAAAGGAAATTCCTGCAGAT
                      ____________________________________________________________
consensus             CAACTCACCGTGTGGATTTTTAGTATCCTCTGCATGGCCCCAAAGGAAATTCCTGCAGAT
 
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JMSF019G10+           TGTGTCATTATTATTGCACGTACTTACCAGGAGTGCCATGGATTGCATTGTATAGGTGAG
JMSF051G11+           TGTGTCATTATTATTGCACGTACTTACCAGGAGTGCCATGGATTGCATTGTATAGGTGAG
                      ____________________________________________________________
consensus             TGTGTCATTATTATTGCACGTACTTACCAGGAGTGCCATGGATTGCATTGTATAGGTGAG
 
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JMSF019G10+           GATCGTGGCGAGGGAGGCTTGGACTAACGTCATTCTTCCTGCCAGGCTGAGGGTACTTGC
JMSF051G11+           GATCGTGGCGAGGGAGGCTTGGACTAACGTCATTCTTCCTGCCAGGCTGAGGGTACTTGC
                      ____________________________________________________________
consensus             GATCGTGGCGAGGGAGGCTTGGACTAACGTCATTCTTCCTGCCAGGCTGAGGGTACTTGC
 
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JMSF019G10+           TTTCCAAGTGGCTAACTTCCTTCTCATTTTGTCAATGACGTGGTAGAAGGTGTCTTTGGT
JMSF051G11+           TTTCCAAGTGGCTAACTTCCTTCTCATTTTGTCAATGACGTGGTAGAAGGTGTCTTTGGT
                      ____________________________________________________________
consensus             TTTCCAAGTGGCTAACTTCCTTCTCATTTTGTCAATGACGTGGTAGAAGGTGTCTTTGGT
 
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JMSF019G10+           GACTTGTTTTTGGAGAATAGGGATTCCAAGGTAAGTGCCAAGATGAGTGACGACGGGTAT
JMSF051G11+           GACTTGTTTTTGGAGAATAGGGATTCCAAGGTAAGTGCCAAGATGAGTGACGACGGGTAT
JMSF004G05+                                      AAGGTAAGTGCCAAGATGAGTGACGACGGGTAT
                      ____________________________________________________________
consensus             GACTTGTTTTTGGAGAATAGGGATTCCAAGGTAAGTGCCAAGATGAGTGACGACGGGTAT
 
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JMSF019G10+           GCCCATCCTATCGCTAATCTTCTTCTTCCAACCTGCATTAATGTTAGGGGAGCAGAAAAT
JMSF051G11+           GCCCATCCTATCGCTAATCTTCTTCTTCCAACCTGCATTAATGTTAGGGGAGCAGAAAAT
JMSF006P23+                                           CTGCATTAATGTTAGGGGAGCAGAAAAT
JMSF004G05+           GCCCATCCTATCGCTAATCTTCTTCTTCCAACCTGCATTAATGTTAGGGGAGCAGAAAAT
                      ____________________________________________________________
consensus             GCCCATCCTATCGCTAATCTTCTTCTTCCAACCTGCATTAATGTTAGGGGAGCAGAAAAT
 
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JMSF019G10+           TTGGGATTTCGAGAAATTTACCTTGAGACCCGAAACACTACTAAAGCGATTCAGGCAATC
JMSF051G11+           TTGGGATTTCGAGAAATTTACCTTGAGACCCGAAACACTACTAAAGCGATTCAGGCAATC
JMSF006P23+           TTGGGATTTCGAGAAATTTACCTTGAGACCCGAAACACTACTAAAGCGATTCAGGCAATC
JMSF004G05+           TTGGGATTTCGAGAAATTTACCTTGAGACCCGAAACACTACTAAAGCGATTCAGGCAATC
                      ____________________________________________________________
consensus             TTGGGATTTCGAGAAATTTACCTTGAGACCCGAAACACTACTAAAGCGATTCAGGCAATC
 
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JMSF019G10+           CAGAATGACCCCGGCTTGATTTTCTGAAGCTTCAACAAAGAGCAACAAATCGTCTGCGAA
JMSF051G11+           CAGAATGACCCCGGCTTGATTTTCTGAAGCTTCAACAAAGAGCAACAAATCGTCTGCGAA
JMSF006P23+           CAGAATGACCCCGGCTTGATTTTCTGAAGCTTCAACAAAGAGCAACAAATCGTCTGCGAA
JMSF004G05+           CAGAATGACCCCGGCTTGATTTTCTGAAGCTTCAACAAAGAGCAACAAATCGTCTGCGAA
                      ____________________________________________________________
consensus             CAGAATGACCCCGGCTTGATTTTCTGAAGCTTCAACAAAGAGCAACAAATCGTCTGCGAA
 
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JMSF019G10+           GAAAAGGTGAGACAAACCCATTCCTCCACGTGTGATATGGACAGGTTTCCAGACGCCCAA
JMSF051G11+           GAAAAGGTGAGACAAACCCATTCCTCCACGTGTGATATGGACAGGTTTCCAGACGCCCAA
JMSF006P23+           GAAAAGGTGAGACAAACCCATTCCTCCACGTGTGATATGGACAGGTTTCCAGACGCCCAA
JMSF004G05+           GAAAAGGTGAGACAAACCCATTCCTCCACGTGTGATATGGACAGGTTTCCAGACGCCCAA
                      ____________________________________________________________
consensus             GAAAAGGTGAGACAAACCCATTCCTCCACGTGTGATATGGACAGGTTTCCAGACGCCCAA
 
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JMSF019G10+           AGAGACTAAGTTTTGAATATCATACGCAACCGCTCCGTGACAATATTAAAAAGATAGGGA
JMSF051G11+           AGAGACTAAGTTTTGAATATCATACGCAACCGCTCCGTGACAATATTAAAAAGATAGGGA
JMSF006P23+           AGAGACTAAGTTTTGAATATCATACGCAACCGCTCCGTGACAATATTAAAAAGATAGGGA
JMSF004G05+           AGAGACTAAGTTTTGAATATCATACGCAACCGCTCCGTGACAATATTAAAAAGATAGGGA
                      ____________________________________________________________
consensus             AGAGACTAAGTTTTGAATATCATACGCAACCGCTCCGTGACAATATTAAAAAGATAGGGA
 
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JMSF019G10+           GCCAAAGGATCACCTTGACGAAGGCCCCTCCCCGGGACGAAGGAGCGAAGA         
JMSF051G11+           GCCAAAGGATCACCTTGACGAAGGCCCCTCCCCGGGACGAAGGAGCGAAGA         
JMSF006P23+           GCCAAAGGATCACCTTGACGAAGGCCCCTCCCCGGGACGAAGGAGCGAAGA         
JMSF004G05+           GCCAAAGGATCACCTTGACGAAGGCCCCTCCCCGGGACGAAGGAGCGAAGACGACCTTCC
                      ____________________________________________________________
consensus             GCCAAAGGATCACCTTGACGAAGGCCCCTCCCCGGGACGAAGGAGCGAAGACGACCTTCC