Contig 002066:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001A09Sequence165002066 (2)691014935emb|CDP11472.1|7e-69unnamed protein product [Coffea canephora]
JMSF004C03Sequence335002066 (2)ref|XP_009787377.1|3e-06PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X1 [Nicotiana syl366004829 (2)ref|XP_009772086.1|8e-21PREDICTED: uncharacterized protein LOC104222546 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF004C03+                                   AGTGCATTTGTAATCTGTGATCAATGTCATGGTGGA
                      ____________________________________________________________
consensus                                     AGTGCATTTGTAATCTGTGATCAATGTCATGGTGGA
 
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JMSF004C03+           CGTCAAGAGAGCGACCATTGATGAAGTCCGTAATGTTGCCATCGCGGAAGCACAGGGACT
                      ____________________________________________________________
consensus             CGTCAAGAGAGCGACCATTGATGAAGTCCGTAATGTTGCCATCGCGGAAGCACAGGGACT
 
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JMSF001A09+                                     CCGGCTCAGAGATAGGGAGTAGAGAAACCCTAGC
JMSF004C03+           CCATTTCGCCGAGAATCATCGAGTGACCGGCTCAGAGATAGGGAGTAGAGAAA-CCTAGC
                      ____________________________________________________________
consensus             CCATTTCGCCGAGAATCATCGAGTGACCGGCTCAGAGATAGGGAGTAGAGAAACCCTAGC
 
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JMSF001A09+           TCGATCGAGACGACTACGACGCCGGCAAATCGGCGATGAGGAAGAT              
JMSF004C03+           TCGATCAAGACGACTACAACGCCGGCAAATCGGTGATGAGGAAGATCGGTGCGTGTATCT
                      ____________________________________________________________
consensus             TCGATCGAGACGACTACGACGCCGGCAAATCGGTGATGAGGAAGATCGGTGCGTGTATCT
 
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JMSF004C03+           GCGTGCGTGCGATCATCAAAACAGATGTTGCACTAGAAAGGCGGTTGGGCAATACCGCCA
                      ____________________________________________________________
consensus             GCGTGCGTGCGATCATCAAAACAGATGTTGCACTAGAAAGGCGGTTGGGCAATACCGCCA
 
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JMSF004C03+           ATACGTCGGCCTATAGAGATAAAGCCACCTGCTTATAGTGGTCACATTTTGGTCACGAGC
                      ____________________________________________________________
consensus             ATACGTCGGCCTATAGAGATAAAGCCACCTGCTTATAGTGGTCACATTTTGGTCACGAGC