| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006I01 | Sequence | 540 | 002064 (25) | ref|XP_009629758.1| | 293 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 755 | 002064 (25) | ref|XP_008777957.1| | 4e-123 | PREDICTED: ADP-ribosylation factor [Phoenix dactylifera] ref|XP_008777958.1| PRE |
| JMFF009L01 | Sequence | 591 | 002064 (25) | ref|XP_009629758.1| | 301 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 699 | 002064 (25) | gb|KHG04267.1| | 2e-109 | ADP-ribosylation factor [Gossypium arboreum] |
| JMFF028E23 | Sequence | 570 | 002064 (25) | ref|XP_009629758.1| | 319 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 703 | 022344 | gb|ABF99503.1| | 4e-74 | ADP-ribosylation factor, putative, expressed [Oryza sativa Japonica Group] |
| JMFF029N23 | Sequence | 513 | 002064 (25) | ref|XP_009629758.1| | 276 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 121 | 002064 (25) | |||
| JMFF041P06 | Sequence | 651 | 002064 (25) | ref|XP_009629758.1| | 374 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 613 | 002064 (25) | emb|CDY09875.1| | 1e-74 | BnaC09g42860D [Brassica napus] |
| JMFF046O01 | Sequence | 595 | 002064 (25) | ref|XP_009629758.1| | 324 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 595 | 002064 (25) | gb|AIX10946.1| | 3e-72 | putative ADP-ribosylation factor [Gardenia jasminoides] |
| JMFN005L07 | Sequence | 638 | 002064 (25) | ref|XP_009629758.1| | 374 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
| JMFN010N20 | Sequence | 627 | 002064 (25) | ref|XP_009629758.1| | 372 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
| JMFN011M08 | Sequence | 613 | 002064 (25) | ref|XP_009629758.1| | 389 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
| JMFN013I08 | Sequence | 452 | 002064 (25) | dbj|BAH57273.1| | 2e-41 | AT3G62290 [Arabidopsis thaliana] | |||||
| JMFN013K10 | Sequence | 626 | 002064 (25) | ref|XP_009629758.1| | 372 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
| JMFN035K09 | Sequence | 449 | 002064 (25) | dbj|BAH57273.1| | 2e-41 | AT3G62290 [Arabidopsis thaliana] | |||||
| JMFN040I08 | Sequence | 590 | 002064 (25) | ref|XP_009629758.1| | 339 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
| JMSF004A16 | Sequence | 267 | 002064 (25) | ref|XP_009629758.1| | 102 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 318 | 002064 (25) | ref|XP_003613219.1| | 4e-16 | ADP-ribosylation factor [Medicago truncatula] |
| JMSF004B16 | Sequence | 234 | 002064 (25) | ref|XP_009629758.1| | 80.5 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | |||||
| JMSF005O03 | Sequence | 328 | 002064 (25) | ref|XP_009629758.1| | 139 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 359 | 002064 (25) | ref|XP_003613219.1| | 2e-15 | ADP-ribosylation factor [Medicago truncatula] |
| JMSF051N23 | Sequence | 629 | 002064 (25) | ref|XP_009629758.1| | 382 | PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis] | 738 | 002064 (25) | gb|KHG04267.1| | 2e-121 | ADP-ribosylation factor [Gossypium arboreum] |
This contig is upended
. : . : . : . : . : . :
rJMSF005O03- AAGTGCTAAACCATTAACAGAC
rJMFF046O01- AACAGCAAGATCAAAGTGCTAAACCATTAACAGAC
JMFN013I08+ GCTAAACCATTAACAGAC
JMFN035K09+ AAACCATTAACAGAC
rJMFF041P06- ATTTTTTTTTTTTTTTTAACAGCAAGATCAAAGTGCTAAACCATTAACAGAC
rJMFF009L01- ACAGAC
rJMFF006I01- ATTAACAGAC
____________________________________________________________
consensus ATTTTTTTTTTTTTTTTAACAGCAAGATCAAAGTGCTAAACCATTAACAGAC
. : . : . : . : . : . :
rJMSF005O03- GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
rJMSF004A16- AATTCAAAACATTGTACTCAAATCTAGACATGAAAT
rJMFF029N23- AACATTGTACTCAAATCTAGACATGAAAT
rJMFF046O01- GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
JMFN013I08+ GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
JMFN035K09+ GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
rJMFF041P06- GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
rJMSF051N23- AAACATTGTACTCAAATCTAGACATGAAAT
rJMFF009L01- GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
rJMFF006I01- GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
____________________________________________________________
consensus GCAACAAATTAATCATCGTTTACAAATTCAAAACATTGTACTCAAATCTAGACATGAAAT
. : . : . : . : . : . :
rJMSF005O03- TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
rJMSF004A16- TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
rJMFF029N23- TACNTATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
rJMFF046O01- TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
JMFN013I08+ TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
JMFN035K09+ TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
rJMFF041P06- TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
rJMSF051N23- TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
rJMFF009L01- TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
rJMFF006I01- TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
____________________________________________________________
consensus TACATATATCCAACTCTTTGTACTACAAAAAGCCATTTCAAAGTCCTACAAAGATTATAA
. : . : . : . : . : . :
rJMSF005O03- GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
rJMSF004A16- GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
rJMFF029N23- GTGCCTTTANAAGGATGTTCATAACCACACCG
rJMFF046O01- GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
JMFN013I08+ GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
JMFN035K09+ GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
rJMFF041P06- GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
rJMSF051N23- GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
rJMFF009L01- GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
rJMFF006I01- GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
____________________________________________________________
consensus GTGCCTTTAAAAGGATGTTCATAACCACACCGACTTGGGGAAAGAAACTAGATAAAAACC
. : . : . : . : . : . :
rJMSF005O03- CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
rJMSF004A16- CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
rJMFF046O01- CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
JMFN013I08+ CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
JMFN035K09+ CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
rJMFF041P06- CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
rJMSF051N23- CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
rJMFF009L01- CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
rJMFF006I01- CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
JMFN011M08+ AGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
JMSF051N23+ TGGCAA
____________________________________________________________
consensus CGCCTGCATCCAGGATCAACCCACGAGAGAATTCTTTACCTGTCTAGGCCTTGTTGGCAA
. : . : . : . : . : . :
rJMSF005O03- TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
rJMSF004A16- TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
rJMFF046O01- TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMFN013I08+ TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMFN035K09+ TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
rJMFF041P06- TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
rJMSF051N23- TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
rJMFF009L01- TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
rJMFF006I01- TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMFN011M08+ TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMSF051N23+ TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMFN005L07+ TGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMFN010N20+ AAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMFN013K10+ AAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
JMFN040I08+ CAGGTGC
JMFF041P06+ TGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
____________________________________________________________
consensus TGTTGTTGGAAAGCCAATCAAGCCCTTCATAAAGACCTTCTCCAGAGGTTGCACAGGTGC
. : . : . : . : . : . :
rJMSF005O03- TCTGGATGTACCAGTGGCGCTGCCTGA
rJMSF004A16- TCTGGATGTACCAGTGGCGCTGCCTGAGAG
rJMFF046O01- TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFN013I08+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFN035K09+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
rJMFF041P06- TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
rJMSF051N23- TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
rJMFF009L01- TCTGGATGTACCAGTGGCGCTGCCTGAGGGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
rJMFF006I01- TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFN011M08+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMSF051N23+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFN005L07+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFN010N20+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFN013K10+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFN040I08+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFF046O01+ CTGGATGTACCAGTGGCGCTGCNTGAGAGAGTGGAGACCAAGCTNAT-CAGTGATCTCA
JMFF028E23+ GCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
JMFF009L01+ GATGTACCAGTGGCGCTGCCTGAGGGAGTGGAGACCAAGCTTATCCAGTGATCTCA
JMFF006I01+ TCTCA
JMFF041P06+ TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
____________________________________________________________
consensus TCTGGATGTACCAGTGGCGCTGCCTGAGAGAGTGGAGACCAAGCTTAT-CAGTGATCTCA
. : . : . : . : . : . :
rJMFF046O01- GCAGCATTCATTGCATCTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFN013I08+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFN035K09+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
rJMFF041P06- GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
rJMSF051N23- GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
rJMFF009L01- GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
rJMFF006I01- GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFN011M08+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMSF051N23+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFN005L07+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFN010N20+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFN013K10+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFN040I08+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFF046O01+ GCAGCATTCATTGCATTGNGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFF028E23+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFF009L01+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFF006I01+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGNTAGCAAATACAAGCAGCACAGCATCA
JMFF041P06+ GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
JMFF029N23+ TTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
____________________________________________________________
consensus GCAGCATTCATTGCATTTGGAAGATCTTGTTTGTTAGCAAATACAAGCAGCACAGCATCA
. : . : . : . : . : . :
rJMFF046O01- CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFN013I08+ CGGAGCTCATCTTCA
JMFN035K09+ CGGAGCTCATCTTCA
rJMFF041P06- CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
rJMSF051N23- CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
rJMFF009L01- CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
rJMFF006I01- CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFN011M08+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMSF051N23+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFN005L07+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFN010N20+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFN013K10+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFN040I08+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFF046O01+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFF028E23+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFF009L01+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFF006I01+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFF041P06+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
JMFF029N23+ CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
____________________________________________________________
consensus CGGAGCTCATCTTCATTCAACATCCTGTGCAATTCATCTCTTGCCTCCACAATACGATCT
. : . : . : . : . : . :
rJMFF046O01- CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
rJMFF041P06- CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
rJMSF051N23- CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
rJMFF009L01- CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
rJMFF006I01- CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFN011M08+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMSF051N23+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFN005L07+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFN010N20+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFN013K10+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFN040I08+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFF046O01+ CTATCATTGCTATCAACAGCAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFF028E23+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFF009L01+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFF006I01+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFF041P06+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
JMFF029N23+ CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
____________________________________________________________
consensus CTATCATTGCTATCAACAACAAAGATGAGACCTTGTGTGTTCTGGAAATAGTGCCTCCAC
. : . : . : . : . : . :
rJMFF046O01- AATGGACGGAT
rJMFF041P06- AATGGACGGATCTTGTCCTGGC
rJMSF051N23- AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
rJMFF009L01- AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
rJMFF006I01- AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFN011M08+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMSF051N23+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFN005L07+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFN010N20+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFN013K10+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFN040I08+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFF046O01+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFF028E23+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFF009L01+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFF006I01+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTNTTGTAT
JMFF041P06+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMFF029N23+ AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
JMSF005O03+ AAGCTGATGTTCTTGTAT
____________________________________________________________
consensus AATGGACGGATCTTGTCCTGGCCTCCAACATCCCAAACTGTGAAGCTGATGTTCTTGTAT
. : . : . : . : . : . :
rJMSF051N23- TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
rJMFF009L01- TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
rJMFF006I01- TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFN011M08+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMSF051N23+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFN005L07+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFN010N20+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFN013K10+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFN040I08+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFF046O01+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFF028E23+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFF009L01+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFF006I01+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFF041P06+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMFF029N23+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMSF005O03+ TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
JMSF004A16+ ATGGTAGTCACNATCTCTCCCAGCTTG
____________________________________________________________
consensus TCAACAGTCTCCACATTGAAACCAATGGTAGGGATGGTAGTCACAATCTCTCCCAGCTTG
. : . : . : . : . : . :
rJMSF051N23- AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCANAATACGCATC
rJMFF009L01- AGCTTGTACAATATGGTTGTCTTACCAGCTGCAT
rJMFF006I01- AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFN011M08+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMSF051N23+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFN005L07+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFN010N20+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFN013K10+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFN040I08+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFF046O01+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGGATC
JMFF028E23+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFF009L01+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFF006I01+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFF041P06+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMFF029N23+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMSF005O03+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMSF004B16+ TACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
JMSF004A16+ AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
____________________________________________________________
consensus AGCTTGTACAATATGGTTGTCTTACCAGCTGCATCAAGACCAACCATCAGAATACGCATC
. : . : . : . : . : . :
rJMSF051N23- TCCTTCTTGGCAAAAAGCCTGCTGA
rJMFF006I01- TCCTTCTTGGCAAAAAGCCTGCTGAA
JMFN011M08+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMSF051N23+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFN005L07+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFN010N20+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFN013K10+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFN040I08+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFF046O01+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFF028E23+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFF009L01+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFF006I01+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFF041P06+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMFF029N23+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMSF005O03+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMSF004B16+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
JMSF004A16+ TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
____________________________________________________________
consensus TCCTTCTTGGCAAAAAGCCTGCTGAAGAGCTTGGTGAATGTCAGCCCCATTTCTCCTTCT
. : . : . : . : . : . :
JMFN011M08+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTA
JMSF051N23+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFN005L07+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFN010N20+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFN013K10+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFN040I08+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFF046O01+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFF028E23+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFF009L01+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFF006I01+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFF041P06+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMFF029N23+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMSF005O03+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMSF004B16+ TCNTGATGATCCCTGAGAGAAGNTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
JMSF004A16+ TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
____________________________________________________________
consensus TCCTGATGATCCCTGAGAGAAGCTTATGAAAGAGGGATCTAGTGAGAGAAAACGCGAGAG
. : . : . : . : . : . :
JMSF051N23+ AGAGAGAGACAGAGCCAAAGGGA
JMFN005L07+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAAC
JMFN010N20+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGC
JMFN013K10+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTG
JMFN040I08+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAA
JMFF046O01+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATAT
JMFF028E23+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAAT
JMFF009L01+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATATC
JMFF006I01+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATA
JMFF041P06+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATATCGA
JMFF029N23+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATATCGAAG
JMSF005O03+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATATCGAAG
JMSF004B16+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATATCGAAG
JMSF004A16+ AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATATCGAAGC
____________________________________________________________
consensus AGAGAGAGACAGAGCCAAAGGGAGAAATGAAGCCTTGCGATCAACGCGTAATATCGAAGC